RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 CNGA4Q8IV77 575 aa18.89■□□□□ 0.62
SCARB2-210ENST00000638567 NEFHP12036 1026 aa18.89■□□□□ 0.61
SCARB2-210ENST00000638567 CAPZA3Q96KX2 299 aa18.89■□□□□ 0.61
SCARB2-210ENST00000638567 MMRN2Q9H8L6 949 aa18.89■□□□□ 0.61
SCARB2-210ENST00000638567 NBPF5PQ86XG9 351 aaPredicted RBP18.89■□□□□ 0.61
SCARB2-210ENST00000638567 ZNF274Q96GC6 653 aaPredicted RBP18.89■□□□□ 0.61
SCARB2-210ENST00000638567 LUC7L2Q9Y383 392 aaKnown RBP18.89■□□□□ 0.61
SCARB2-210ENST00000638567 CDK12Q9NYV4 1490 aaPredicted RBP18.89■□□□□ 0.61
SCARB2-210ENST00000638567 DEXIO95424 95 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 ADCY10Q96PN6 1610 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 MLH3Q9UHC1 1453 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 KRT86O43790 486 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 PRDM1O75626 825 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 IFFO1Q0D2I5 559 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 KIF5AQ12840 1032 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 HAUS7Q99871 368 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 CCDC113Q9H0I3 377 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 ZNF215Q9UL58 517 aaPredicted RBP18.88■□□□□ 0.61
SCARB2-210ENST00000638567 CYP21A2P08686 494 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 SCRN1Q12765 414 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 PI4K2BQ8TCG2 481 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 RPGRQ92834 1020 aaKnown RBP18.88■□□□□ 0.61
SCARB2-210ENST00000638567 VPS16Q9H269 839 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 MCM9Q9NXL9 1143 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 TET3O43151 1660 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 PRAMEF22A3QJZ6 481 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 NAPAP54920 295 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 CCDC42Q96M95 316 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 VPS18Q9P253 973 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 KCNJ14Q9UNX9 436 aa18.88■□□□□ 0.61
SCARB2-210ENST00000638567 ROBO2Q9HCK4 1378 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 TRMT44Q8IYL2 757 aaKnown RBP18.87■□□□□ 0.61
SCARB2-210ENST00000638567 COPRSQ9NQ92 184 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 MAPK8IP1Q9UQF2 711 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 V9GY48 417 aaPredicted RBP18.87■□□□□ 0.61
SCARB2-210ENST00000638567 ERCC6L2Q5T890 1561 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 ARHGAP6O43182 974 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 PFKFB1P16118 471 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 ADD1P35611 737 aaKnown RBP18.87■□□□□ 0.61
SCARB2-210ENST00000638567 KRT83P78385 493 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 MLKLQ8NB16 471 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 PCDHA7Q9UN72 937 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 RSPH14Q9UHP6 348 aa18.87■□□□□ 0.61
SCARB2-210ENST00000638567 SHROOM2Q13796 1616 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 MTX1Q13505 466 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 TMEM132AQ24JP5 1023 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 RNF187Q5TA31 235 aaPredicted RBP18.86■□□□□ 0.61
SCARB2-210ENST00000638567 NLRP3Q96P20 1036 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 JAG2Q9Y219 1238 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 USP6P35125 1406 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 ZNF532Q9HCE3 1301 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 UNC13BO14795 1591 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 TACC1O75410 805 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 CTDSPL2Q05D32 466 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 PRPF4BQ13523 1007 aaKnown RBP18.86■□□□□ 0.61
SCARB2-210ENST00000638567 DTHD1Q6ZMT9 781 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 MAATS1Q7Z4T9 603 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 LRRC8AQ8IWT6 810 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 SLF2Q8IX21 1173 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 SPAG5Q96R06 1193 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 FAM107BQ9H098 131 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 A0A087WWV3 80 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 PNOCQ13519 176 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 PUM3Q15397 648 aaKnown RBP18.86■□□□□ 0.61
SCARB2-210ENST00000638567 TTLL7Q6ZT98 887 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 ZDHHC9Q9Y397 364 aa18.86■□□□□ 0.61
SCARB2-210ENST00000638567 DNAJC10Q8IXB1 793 aa18.85■□□□□ 0.61
SCARB2-210ENST00000638567 CPSF1Q10570 1443 aaKnown RBP18.85■□□□□ 0.61
SCARB2-210ENST00000638567 EFCAB6Q5THR3 1501 aa18.85■□□□□ 0.61
SCARB2-210ENST00000638567 LRRC24Q50LG9 513 aa18.85■□□□□ 0.61
SCARB2-210ENST00000638567 KIAA1524Q8TCG1 905 aa18.85■□□□□ 0.61
SCARB2-210ENST00000638567 GOPCQ9HD26 462 aa18.85■□□□□ 0.61
SCARB2-210ENST00000638567 GOLGA6L7A0A1B0GV03 622 aa18.85■□□□□ 0.61
SCARB2-210ENST00000638567 IBSPP21815 317 aaPredicted RBP18.84■□□□□ 0.61
SCARB2-210ENST00000638567 SSR1P43307 286 aaKnown RBP18.84■□□□□ 0.61
SCARB2-210ENST00000638567 KLHL34Q8N239 644 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 DDX17Q92841 729 aaKnown RBP18.84■□□□□ 0.61
SCARB2-210ENST00000638567 FTOQ9C0B1 505 aaKnown RBP eCLIP18.84■□□□□ 0.61
SCARB2-210ENST00000638567 PDIA3P30101 505 aaKnown RBP18.84■□□□□ 0.61
SCARB2-210ENST00000638567 POSTNQ15063 836 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 CTNND2Q9UQB3 1225 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 FGAP02671 866 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 ERCC6LQ2NKX8 1250 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 TDRD7Q8NHU6 1098 aaKnown RBP18.84■□□□□ 0.61
SCARB2-210ENST00000638567 STAMQ92783 540 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 MADDQ8WXG6 1647 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 ADCY9O60503 1353 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 hCG_1642624A0A1W2PR95 340 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 NDUFA8P51970 172 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 POLA2Q14181 598 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 CCDC122Q5T0U0 273 aa18.84■□□□□ 0.61
SCARB2-210ENST00000638567 SH3TC1Q8TE82 1336 aa18.83■□□□□ 0.61
SCARB2-210ENST00000638567 PHKG2P15735 406 aa18.83■□□□□ 0.61
SCARB2-210ENST00000638567 DYDC1Q8WWB3 177 aa18.83■□□□□ 0.61
SCARB2-210ENST00000638567 PRM3Q9NNZ6 103 aa18.83■□□□□ 0.61
SCARB2-210ENST00000638567 ARID5AQ03989 594 aa18.83■□□□□ 0.6
SCARB2-210ENST00000638567 WWC2Q6AWC2 1192 aa18.83■□□□□ 0.6
SCARB2-210ENST00000638567 SEPT7Q16181 437 aaKnown RBP18.83■□□□□ 0.6
SCARB2-210ENST00000638567 TRMT1LQ7Z2T5 733 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms