RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 BIN1O00499 593 aa11.37□□□□□ -0.59
KCNMA1-228ENST00000638223 NPR1P16066 1061 aa11.37□□□□□ -0.59
KCNMA1-228ENST00000638223 MAP3K11Q16584 847 aa11.37□□□□□ -0.59
KCNMA1-228ENST00000638223 CCDC93Q567U6 631 aa11.37□□□□□ -0.59
KCNMA1-228ENST00000638223 CPXCR1Q8N123 301 aa11.37□□□□□ -0.59
KCNMA1-228ENST00000638223 RRP36Q96EU6 259 aaKnown RBP11.37□□□□□ -0.59
KCNMA1-228ENST00000638223 CCDC39Q9UFE4 941 aa11.37□□□□□ -0.59
KCNMA1-228ENST00000638223 CIAO1O76071 339 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 PARP1P09874 1014 aaKnown RBP11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 CALM1P0DP23 149 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 CALM2P0DP24 149 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 CALM3P0DP25 149 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 RTL9Q8NET4 1388 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 POLR1AO95602 1720 aaPredicted RBP11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 ZFYVE27Q5T4F4 411 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 CNNM3Q8NE01 707 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 ANGEL1Q9UNK9 670 aaKnown RBP11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 MARCKSP29966 332 aaPredicted RBP11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 MRE11P49959 708 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 hCG_1642624A0A1W2PR95 340 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 PTH1RQ03431 593 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 MASTLQ96GX5 879 aa11.36□□□□□ -0.59
KCNMA1-228ENST00000638223 SPDYE3A6NKU9 549 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 RPS6KB1P23443 525 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 SLC1A4P43007 532 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 SP4Q02446 784 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 ISM2Q6H9L7 571 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 FCHSD1Q86WN1 690 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 LINC00116Q8NCU8 138 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 PDCL3Q9H2J4 239 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 DACH1Q9UI36 760 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 ZSCAN22P10073 491 aaPredicted RBP11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 EIF5P55010 431 aaKnown RBP11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 TRAF1Q13077 416 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 ARHGEF10LQ9HCE6 1279 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 C6orf50Q9HD87 102 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 PATL2C9JE40 543 aaKnown RBP11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 SH2D4AQ9H788 454 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 PIM2Q9P1W9 311 aa11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 V9GY48 417 aaPredicted RBP11.35□□□□□ -0.59
KCNMA1-228ENST00000638223 AKNAD1Q5T1N1 836 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 IFNL3Q8IZI9 196 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 ISCA1Q9BUE6 129 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 CHRNA5P30532 468 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 DYNLL1P63167 89 aaKnown RBP11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 PPARAQ07869 468 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 TMEM87BQ96K49 555 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 FGAP02671 866 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 HSPD1P10809 573 aaKnown RBP11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 OTUD7BQ6GQQ9 843 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 CALML4Q96GE6 196 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 DCCP43146 1447 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 TMOD4Q9NZQ9 345 aa11.34□□□□□ -0.59
KCNMA1-228ENST00000638223 E7EWF7 191 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 DNM1Q05193 864 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 FILIP1Q7Z7B0 1213 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 CERS3Q8IU89 383 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 CALML3P27482 149 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 EZH2Q15910 746 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 USP48Q86UV5 1035 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 ZSCAN16Q9H4T2 348 aaPredicted RBP11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 GPR108Q9NPR9 543 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 PKD2L1Q9P0L9 805 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 TRIM75PA6NK02 468 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 PHKBQ93100 1093 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 RBM27Q9P2N5 1060 aaKnown RBP11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 MINPP1Q9UNW1 487 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 CNPY2Q9Y2B0 182 aa11.33□□□□□ -0.6
KCNMA1-228ENST00000638223 ARHGAP23Q9P227 1491 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 IQGAP1P46940 1657 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 PPP4R3AQ6IN85 833 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 TAOK3Q9H2K8 898 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 CARMIL3Q8ND23 1372 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 VTI1AQ96AJ9 217 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 DSCC1Q9BVC3 393 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 ADCY9O60503 1353 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 CPDO75976 1380 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 SLIT1O75093 1534 aa11.32□□□□□ -0.6
KCNMA1-228ENST00000638223 PRKAB2O43741 272 aa11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 ODF2Q5BJF6 829 aa11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 NSMFQ6X4W1 530 aa11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 FNBP4Q8N3X1 1017 aaPredicted RBP11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 PALD1Q9ULE6 856 aa11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 CSADQ9Y600 493 aa11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 GNA11P29992 359 aa11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 UBE3CQ15386 1083 aa11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 SYCP1Q15431 976 aa11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 FAM173BQ6P4H8 233 aa11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 ARPP21Q9UBL0 812 aaPredicted RBP11.31□□□□□ -0.6
KCNMA1-228ENST00000638223 NRKQ7Z2Y5 1582 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms