RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 ZNF532Q9HCE3 1301 aa22.21■■□□□ 1.15
PTBP1-220ENST00000627714 PIH1D3Q9NQM4 214 aaKnown RBP22.21■■□□□ 1.15
PTBP1-220ENST00000627714 ITGB4P16144 1822 aa22.21■■□□□ 1.15
PTBP1-220ENST00000627714 MROH5Q6ZUA9 1318 aa22.21■■□□□ 1.15
PTBP1-220ENST00000627714 FAM237AA0A1B0GTK4 181 aa22.21■■□□□ 1.15
PTBP1-220ENST00000627714 NRDCO43847 1150 aa22.21■■□□□ 1.15
PTBP1-220ENST00000627714 KCNJ6P48051 423 aa22.21■■□□□ 1.15
PTBP1-220ENST00000627714 CCDC102BQ68D86 513 aa22.21■■□□□ 1.15
PTBP1-220ENST00000627714 ARID3AQ99856 593 aa22.21■■□□□ 1.15
PTBP1-220ENST00000627714 SLAIN2Q9P270 581 aa22.21■■□□□ 1.15
PTBP1-220ENST00000627714 STK36Q9NRP7 1315 aa22.2■■□□□ 1.14
PTBP1-220ENST00000627714 ZBTB43O43298 467 aa22.2■■□□□ 1.14
PTBP1-220ENST00000627714 GPTP24298 496 aa22.2■■□□□ 1.14
PTBP1-220ENST00000627714 TRIM29Q14134 588 aa22.2■■□□□ 1.14
PTBP1-220ENST00000627714 PUM3Q15397 648 aaKnown RBP22.2■■□□□ 1.14
PTBP1-220ENST00000627714 KRT40Q6A162 431 aa22.2■■□□□ 1.14
PTBP1-220ENST00000627714 RAB11FIP4Q86YS3 637 aa22.2■■□□□ 1.14
PTBP1-220ENST00000627714 CCAR2Q8N163 923 aaKnown RBP22.2■■□□□ 1.14
PTBP1-220ENST00000627714 LPIN2Q92539 896 aa22.2■■□□□ 1.14
PTBP1-220ENST00000627714 AK7Q96M32 723 aa22.2■■□□□ 1.14
PTBP1-220ENST00000627714 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.19■■□□□ 1.14
PTBP1-220ENST00000627714 SYKP43405 635 aa22.19■■□□□ 1.14
PTBP1-220ENST00000627714 GNL2Q13823 731 aaKnown RBP22.19■■□□□ 1.14
PTBP1-220ENST00000627714 AIDAQ96BJ3 306 aa22.19■■□□□ 1.14
PTBP1-220ENST00000627714 GJB4Q9NTQ9 266 aa22.19■■□□□ 1.14
PTBP1-220ENST00000627714 TRMT112Q9UI30 125 aaKnown RBP22.19■■□□□ 1.14
PTBP1-220ENST00000627714 HPSEQ9Y251 543 aa22.19■■□□□ 1.14
PTBP1-220ENST00000627714 TCRBV5S4A2TA0A5A2 114 aa22.19■■□□□ 1.14
PTBP1-220ENST00000627714 ERVV-1B6SEH8 477 aa22.19■■□□□ 1.14
PTBP1-220ENST00000627714 LIFRP42702 1097 aa22.19■■□□□ 1.14
PTBP1-220ENST00000627714 SYNE4Q8N205 404 aa22.19■■□□□ 1.14
PTBP1-220ENST00000627714 TUBE1Q9UJT0 475 aa22.19■■□□□ 1.14
PTBP1-220ENST00000627714 CYP19A1P11511 503 aaPredicted RBP22.18■■□□□ 1.14
PTBP1-220ENST00000627714 U2AF2P26368 475 aaKnown RBP eCLIP22.18■■□□□ 1.147e-8■■■□□ 17.9
PTBP1-220ENST00000627714 IARSP41252 1262 aaKnown RBP22.18■■□□□ 1.14
PTBP1-220ENST00000627714 IGDCC4Q8TDY8 1250 aa22.18■■□□□ 1.14
PTBP1-220ENST00000627714 FBXW7Q969H0 707 aa22.18■■□□□ 1.14
PTBP1-220ENST00000627714 STRBPQ96SI9 672 aaKnown RBP22.18■■□□□ 1.14
PTBP1-220ENST00000627714 FEZ1Q99689 392 aa22.18■■□□□ 1.14
PTBP1-220ENST00000627714 CNNM2Q9H8M5 875 aa22.18■■□□□ 1.14
PTBP1-220ENST00000627714 MROH7-TTC4A0A0A0MT08 1334 aa22.18■■□□□ 1.14
PTBP1-220ENST00000627714 MYO1BO43795 1136 aa22.18■■□□□ 1.14
PTBP1-220ENST00000627714 WDHD1O75717 1129 aaPredicted RBP22.18■■□□□ 1.14
PTBP1-220ENST00000627714 SMC2O95347 1197 aa22.18■■□□□ 1.14
PTBP1-220ENST00000627714 XPO4Q9C0E2 1151 aaKnown RBP22.18■■□□□ 1.14
PTBP1-220ENST00000627714 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.18■■□□□ 1.14
PTBP1-220ENST00000627714 CGNQ9P2M7 1197 aaKnown RBP22.18■■□□□ 1.14
PTBP1-220ENST00000627714 ECM29Q5VYK3 1845 aa22.17■■□□□ 1.14
PTBP1-220ENST00000627714 B4E1Z4 1266 aa22.17■■□□□ 1.14
PTBP1-220ENST00000627714 TUBB4AP04350 444 aa22.17■■□□□ 1.14
PTBP1-220ENST00000627714 PHKA1P46020 1223 aa22.17■■□□□ 1.14
PTBP1-220ENST00000627714 WASF1Q92558 559 aa22.17■■□□□ 1.14
PTBP1-220ENST00000627714 IFNKQ9P0W0 207 aa22.17■■□□□ 1.14
PTBP1-220ENST00000627714 TIAM2Q8IVF5 1701 aa22.17■■□□□ 1.14
PTBP1-220ENST00000627714 NID2Q14112 1375 aa22.17■■□□□ 1.14
PTBP1-220ENST00000627714 NUP98P52948 1817 aa22.17■■□□□ 1.14
PTBP1-220ENST00000627714 USP27XA6NNY8 438 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 GOLGA8AA7E2F4 631 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 PATL2C9JE40 543 aaKnown RBP22.16■■□□□ 1.14
PTBP1-220ENST00000627714 FGFR2P21802 821 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 NCAPHQ15003 741 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 PTPAQ15257 358 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 NFXL1Q6ZNB6 911 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 LY9Q9HBG7 655 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 BCL9O00512 1426 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 DOCK2Q92608 1830 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 CUTAO60888 179 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 SFPQP23246 707 aaKnown RBP eCLIP22.16■■□□□ 1.144e-7■■□□□ 12.7
PTBP1-220ENST00000627714 CDC27P30260 824 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 NTRK3Q16288 839 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 MICU3Q86XE3 530 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 KIF18AQ8NI77 898 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 ZNF592Q92610 1267 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 MAP3K14Q99558 947 aa22.16■■□□□ 1.14
PTBP1-220ENST00000627714 MYO5AQ9Y4I1 1855 aaKnown RBP22.16■■□□□ 1.14
PTBP1-220ENST00000627714 PSDA5PKW4 1024 aaPredicted RBP22.15■■□□□ 1.14
PTBP1-220ENST00000627714 MARCKSP29966 332 aaPredicted RBP22.15■■□□□ 1.14
PTBP1-220ENST00000627714 MAP3K12Q12852 859 aa22.15■■□□□ 1.14
PTBP1-220ENST00000627714 TMEM67Q5HYA8 995 aa22.15■■□□□ 1.14
PTBP1-220ENST00000627714 RESP18Q5W5W9 173 aa22.15■■□□□ 1.14
PTBP1-220ENST00000627714 ELOA2Q8IYF1 753 aaPredicted RBP22.15■■□□□ 1.14
PTBP1-220ENST00000627714 WWC3Q9ULE0 1092 aa22.15■■□□□ 1.14
PTBP1-220ENST00000627714 BIN1O00499 593 aa22.15■■□□□ 1.14
PTBP1-220ENST00000627714 SLC5A1P13866 664 aa22.15■■□□□ 1.14
PTBP1-220ENST00000627714 AIFM3Q96NN9 605 aa22.15■■□□□ 1.14
PTBP1-220ENST00000627714 KRT23Q9C075 422 aa22.15■■□□□ 1.14
PTBP1-220ENST00000627714 CHD4Q14839 1912 aa22.15■■□□□ 1.14
PTBP1-220ENST00000627714 CBFA2T2O43439 604 aa22.14■■□□□ 1.14
PTBP1-220ENST00000627714 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.14
PTBP1-220ENST00000627714 TMC6Q7Z403 805 aa22.14■■□□□ 1.14
PTBP1-220ENST00000627714 SPATA5Q8NB90 893 aa22.14■■□□□ 1.14
PTBP1-220ENST00000627714 MTA3Q9BTC8 594 aa22.14■■□□□ 1.14
PTBP1-220ENST00000627714 NAPBQ9H115 298 aa22.14■■□□□ 1.14
PTBP1-220ENST00000627714 DENND2AQ9ULE3 1009 aa22.14■■□□□ 1.14
PTBP1-220ENST00000627714 SLC12A7Q9Y666 1083 aa22.14■■□□□ 1.14
PTBP1-220ENST00000627714 SSRP1Q08945 709 aaKnown RBP22.14■■□□□ 1.13
PTBP1-220ENST00000627714 SHC4Q6S5L8 630 aa22.14■■□□□ 1.13
PTBP1-220ENST00000627714 PHKBQ93100 1093 aa22.14■■□□□ 1.13
PTBP1-220ENST00000627714 UBN2Q6ZU65 1347 aa22.13■■□□□ 1.13
PTBP1-220ENST00000627714 GNAT2P19087 354 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms