RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 HACE1Q8IYU2 909 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 ZNF526Q8TF50 670 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 PHACTR3Q96KR7 559 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 ZKSCAN3Q9BRR0 538 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 INCENPQ9NQS7 918 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 CCDC169A6NNP5 214 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 URI1O94763 535 aaPredicted RBP11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 ARMT1Q9H993 441 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 MROH5Q6ZUA9 1318 aa11.06□□□□□ -0.64
CLTCL1-211ENST00000621271 STRN3Q13033 797 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 LETM2Q2VYF4 491 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 TMC6Q7Z403 805 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 SREK1Q8WXA9 508 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 GOLGA1Q92805 767 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 DHX58Q96C10 678 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 XAGE2Q96GT9 111 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 NACA2Q9H009 215 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 RPL13P26373 211 aaKnown RBP11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 GJC1P36383 396 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 GSDMDP57764 484 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 BIRC2Q13490 618 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 MFSD14BQ5SR56 506 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 PLCD4Q9BRC7 762 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 GDPD2Q9HCC8 539 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 HELLSQ9NRZ9 838 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 TMEM94Q12767 1356 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 MARCKSP29966 332 aaPredicted RBP11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 CDAN1Q8IWY9 1227 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 EHBP1Q8NDI1 1231 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 USP40Q9NVE5 1235 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 CAVIN2O95810 425 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 PPP1R14CQ8TAE6 165 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 WDR44Q5JSH3 913 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 SMC5Q8IY18 1101 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 NBPF3Q9H094 633 aa11.05□□□□□ -0.64
CLTCL1-211ENST00000621271 PTPRKQ15262 1439 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 EDC4Q6P2E9 1401 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 POLR3AO14802 1390 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 UBE2HP62256 183 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 HAUS3Q68CZ6 603 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 DHX32Q7L7V1 743 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 MAPKAPK5Q8IW41 473 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 MRPS27Q92552 414 aaKnown RBP11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 RAD50Q92878 1312 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 BICDL2A1A5D9 508 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 VAMP4O75379 141 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 ZNF165P49910 485 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 GADL1Q6ZQY3 521 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 CCDC65Q8IXS2 484 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 FNBP4Q8N3X1 1017 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 RNF34Q969K3 372 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 LGR6Q9HBX8 967 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 ATP2B4P23634 1241 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 FRMD4BQ9Y2L6 1034 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 NDC80O14777 642 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 CYLC1P35663 651 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 PLCB3Q01970 1234 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 NOLC1Q14978 699 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 TSPYL6Q8N831 410 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 ZNF496Q96IT1 587 aaPredicted RBP11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 PRKAG2Q9UGJ0 569 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 PAXBP1Q9Y5B6 917 aa11.04□□□□□ -0.64
CLTCL1-211ENST00000621271 ABCA9Q8IUA7 1624 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 GOLGA6L9A6NEM1 432 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 CCT6AP40227 531 aaKnown RBP11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 TRPC3Q13507 836 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 ZNF594Q96JF6 807 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 RXRAP19793 462 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 CHURC1Q8WUH1 139 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 BCCIPQ9P287 314 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 HECW2Q9P2P5 1572 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 EXOC7Q9UPT5 735 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 EIF2AK4Q9P2K8 1649 aaKnown RBP11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 ARHGEF35A5YM69 484 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 APOBRQ0VD83 1088 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 TNNI3KQ59H18 835 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 BBXQ8WY36 941 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 FPGT-TNNI3KV9GXZ4 949 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 STX10O60499 249 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 PRDM1O75626 825 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 CFBP00751 764 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 ZSCAN22P10073 491 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 GLG1Q92896 1179 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 TMX3Q96JJ7 454 aa11.03□□□□□ -0.64
CLTCL1-211ENST00000621271 CEP85Q6P2H3 762 aa11.02□□□□□ -0.64
CLTCL1-211ENST00000621271 RRAGDQ9NQL2 400 aaPredicted RBP11.02□□□□□ -0.64
CLTCL1-211ENST00000621271 RNF123Q5XPI4 1314 aa11.02□□□□□ -0.64
CLTCL1-211ENST00000621271 SPTLC2O15270 562 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 SV2BQ7L1I2 683 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 NR1I2O75469 434 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 GNPTABQ3T906 1256 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 USH1GQ495M9 461 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 KIAA0825Q8IV33 1275 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 SPATA5Q8NB90 893 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms