RNA–Protein interactions for RNA: ENST00000615041.1

FAM49B-229, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-229ENST00000615041 SPATA32Q96LK8 384 aa10.28□□□□□ -0.76
FAM49B-229ENST00000615041 TLR3O15455 904 aaKnown RBP10.27□□□□□ -0.77
FAM49B-229ENST00000615041 DEAF1O75398 565 aaPredicted RBP10.27□□□□□ -0.77
FAM49B-229ENST00000615041 TRIM37O94972 964 aa10.27□□□□□ -0.77
FAM49B-229ENST00000615041 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
FAM49B-229ENST00000615041 DIEXFQ68CQ4 756 aaKnown RBP10.27□□□□□ -0.77
FAM49B-229ENST00000615041 SCARA3Q6AZY7 606 aa10.27□□□□□ -0.77
FAM49B-229ENST00000615041 DTWD1Q8N5C7 304 aa10.27□□□□□ -0.77
FAM49B-229ENST00000615041 USP26Q9BXU7 913 aa10.27□□□□□ -0.77
FAM49B-229ENST00000615041 FAM221AA4D161 298 aa10.26□□□□□ -0.77
FAM49B-229ENST00000615041 DDX3YO15523 660 aaKnown RBP10.26□□□□□ -0.77
FAM49B-229ENST00000615041 CRKP46108 304 aa10.26□□□□□ -0.77
FAM49B-229ENST00000615041 PTPN11Q06124 597 aaPredicted RBP10.26□□□□□ -0.77
FAM49B-229ENST00000615041 MCF2L2Q86YR7 1114 aa10.26□□□□□ -0.77
FAM49B-229ENST00000615041 FBXO27Q8NI29 283 aa10.26□□□□□ -0.77
FAM49B-229ENST00000615041 UBXN4Q92575 508 aa10.26□□□□□ -0.77
FAM49B-229ENST00000615041 NKD1Q969G9 470 aa10.26□□□□□ -0.77
FAM49B-229ENST00000615041 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.26□□□□□ -0.773e-8■□□□□ 9.1
FAM49B-229ENST00000615041 EFR3BQ9Y2G0 817 aa10.26□□□□□ -0.77
FAM49B-229ENST00000615041 ROBO2Q9HCK4 1378 aa10.26□□□□□ -0.77
FAM49B-229ENST00000615041 ARHGEF15O94989 841 aa10.25□□□□□ -0.77
FAM49B-229ENST00000615041 CTSBP07858 339 aa10.25□□□□□ -0.77
FAM49B-229ENST00000615041 FGRP09769 529 aa10.25□□□□□ -0.77
FAM49B-229ENST00000615041 CD68P34810 354 aaPredicted RBP10.25□□□□□ -0.77
FAM49B-229ENST00000615041 SNRPNP63162 240 aaKnown RBP10.25□□□□□ -0.77
FAM49B-229ENST00000615041 FOXD4L6Q3SYB3 417 aaPredicted RBP10.25□□□□□ -0.77
FAM49B-229ENST00000615041 FOXD4L3Q6VB84 417 aaPredicted RBP10.25□□□□□ -0.77
FAM49B-229ENST00000615041 GPBAR1Q8TDU6 330 aa10.25□□□□□ -0.77
FAM49B-229ENST00000615041 TRIM11Q96F44 468 aa10.25□□□□□ -0.77
FAM49B-229ENST00000615041 SEC16BQ96JE7 1060 aa10.25□□□□□ -0.77
FAM49B-229ENST00000615041 LRRC3Q9BY71 257 aa10.25□□□□□ -0.77
FAM49B-229ENST00000615041 CCDC86Q9H6F5 360 aaKnown RBP10.25□□□□□ -0.77
FAM49B-229ENST00000615041 GINM1Q9NU53 330 aa10.25□□□□□ -0.77
FAM49B-229ENST00000615041 A0A0A0MRY4 1105 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 ADAM11O75078 769 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 CILPO75339 1184 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 BPNT1O95861 308 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 NASPP49321 788 aaPredicted RBP10.24□□□□□ -0.77
FAM49B-229ENST00000615041 MPP2Q14168 576 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 PDE3AQ14432 1141 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 SEZ6Q53EL9 994 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 ACSBG1Q96GR2 724 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 KRT82Q9NSB4 513 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 CACNA2D2Q9NY47 1150 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 KCNK4Q9NYG8 393 aa10.24□□□□□ -0.77
FAM49B-229ENST00000615041 LOC100289279A0A1B0GTE1 492 aa10.23□□□□□ -0.77
FAM49B-229ENST00000615041 GTF2F1P35269 517 aaKnown RBP eCLIP10.23□□□□□ -0.77
FAM49B-229ENST00000615041 RAC1P63000 192 aa10.23□□□□□ -0.77
FAM49B-229ENST00000615041 LINC00114Q6XXX2 140 aa10.23□□□□□ -0.77
FAM49B-229ENST00000615041 FBXO11Q86XK2 927 aa10.23□□□□□ -0.77
FAM49B-229ENST00000615041 SLITRK4Q8IW52 837 aa10.23□□□□□ -0.77
FAM49B-229ENST00000615041 FMR1NBQ8N0W7 255 aaPredicted RBP10.23□□□□□ -0.77
FAM49B-229ENST00000615041 DCAF11Q8TEB1 546 aa10.23□□□□□ -0.77
FAM49B-229ENST00000615041 DHX38Q92620 1227 aaKnown RBP10.23□□□□□ -0.77
FAM49B-229ENST00000615041 PCDHA4Q9UN74 947 aa10.23□□□□□ -0.77
FAM49B-229ENST00000615041 SOX9P48436 509 aa10.22□□□□□ -0.77
FAM49B-229ENST00000615041 COL9A2Q14055 689 aaPredicted RBP10.22□□□□□ -0.77
FAM49B-229ENST00000615041 CWF19L2Q2TBE0 894 aaKnown RBP10.22□□□□□ -0.77
FAM49B-229ENST00000615041 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.22□□□□□ -0.77
FAM49B-229ENST00000615041 PLVAPQ9BX97 442 aa10.22□□□□□ -0.77
FAM49B-229ENST00000615041 ZNF862O60290 1169 aa10.21□□□□□ -0.77
FAM49B-229ENST00000615041 LIG1P18858 919 aa10.21□□□□□ -0.77
FAM49B-229ENST00000615041 HNRNPUQ00839 825 aaKnown RBP eCLIP10.21□□□□□ -0.77
FAM49B-229ENST00000615041 RPL6Q02878 288 aaKnown RBP10.21□□□□□ -0.77
FAM49B-229ENST00000615041 REC114Q7Z4M0 266 aa10.21□□□□□ -0.77
FAM49B-229ENST00000615041 UBASH3BQ8TF42 649 aa10.21□□□□□ -0.77
FAM49B-229ENST00000615041 MKL2Q9ULH7 1088 aa10.21□□□□□ -0.77
FAM49B-229ENST00000615041 DLL1O00548 723 aa10.2□□□□□ -0.78
FAM49B-229ENST00000615041 GNB5O14775 395 aa10.2□□□□□ -0.78
FAM49B-229ENST00000615041 DLGAP3O95886 979 aa10.2□□□□□ -0.78
FAM49B-229ENST00000615041 HP1BP3Q5SSJ5 553 aaPredicted RBP10.2□□□□□ -0.78
FAM49B-229ENST00000615041 WDR89Q96FK6 387 aaPredicted RBP10.2□□□□□ -0.78
FAM49B-229ENST00000615041 SPDYE3A6NKU9 549 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 PIK3R2O00459 728 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 WIPF1O43516 503 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 SSBP05455 408 aaKnown RBP eCLIP10.19□□□□□ -0.78
FAM49B-229ENST00000615041 SELPP16109 830 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 MCM4P33991 863 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 CDK8P49336 464 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 DUOXA2Q1HG44 320 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 ARMC5Q96C12 935 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 BRMS1Q9HCU9 246 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 STK17AQ9UEE5 414 aa10.19□□□□□ -0.78
FAM49B-229ENST00000615041 FAM229AH3BQW9 127 aa10.18□□□□□ -0.78
FAM49B-229ENST00000615041 TRIM28Q13263 835 aaKnown RBP10.18□□□□□ -0.78
FAM49B-229ENST00000615041 WIPI1Q5MNZ9 446 aaPredicted RBP10.18□□□□□ -0.78
FAM49B-229ENST00000615041 DNAJC2Q99543 621 aaKnown RBP10.18□□□□□ -0.78
FAM49B-229ENST00000615041 STRIP2Q9ULQ0 834 aa10.18□□□□□ -0.78
FAM49B-229ENST00000615041 STK10O94804 968 aaKnown RBP10.17□□□□□ -0.78
FAM49B-229ENST00000615041 WISP1O95388 367 aa10.17□□□□□ -0.78
FAM49B-229ENST00000615041 ZNF165P49910 485 aa10.17□□□□□ -0.78
FAM49B-229ENST00000615041 INPP5AQ14642 412 aa10.17□□□□□ -0.78
FAM49B-229ENST00000615041 KIF4BQ2VIQ3 1234 aa10.17□□□□□ -0.78
FAM49B-229ENST00000615041 LRFN4Q6PJG9 635 aa10.17□□□□□ -0.78
FAM49B-229ENST00000615041 CPLX3Q8WVH0 158 aa10.17□□□□□ -0.78
FAM49B-229ENST00000615041 PLPPR2Q96GM1 343 aa10.17□□□□□ -0.78
FAM49B-229ENST00000615041 WDR18Q9BV38 432 aa10.17□□□□□ -0.78
FAM49B-229ENST00000615041 PPT2Q9UMR5 302 aa10.17□□□□□ -0.78
FAM49B-229ENST00000615041 AOC2O75106 756 aa10.16□□□□□ -0.78
FAM49B-229ENST00000615041 EXOSC6Q5RKV6 272 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms