RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 ALG1Q9BT22 464 aa20.02■□□□□ 0.79
NEK3-206ENST00000611833 CCDC87Q9NVE4 849 aa20.02■□□□□ 0.79
NEK3-206ENST00000611833 TAOK2Q9UL54 1235 aa20.02■□□□□ 0.79
NEK3-206ENST00000611833 A0A0G2JS52 829 aa20.01■□□□□ 0.79
NEK3-206ENST00000611833 SLC5A1P13866 664 aa20.01■□□□□ 0.79
NEK3-206ENST00000611833 CRKLP46109 303 aaKnown RBP20.01■□□□□ 0.79
NEK3-206ENST00000611833 AOPEPQ8N6M6 819 aa20.01■□□□□ 0.79
NEK3-206ENST00000611833 SENP2Q9HC62 589 aa20.01■□□□□ 0.79
NEK3-206ENST00000611833 NEDD4P46934 1319 aa20.01■□□□□ 0.79
NEK3-206ENST00000611833 DOCK2Q92608 1830 aa20.01■□□□□ 0.79
NEK3-206ENST00000611833 RXRAP19793 462 aa20.01■□□□□ 0.79
NEK3-206ENST00000611833 NFXL1Q6ZNB6 911 aa20.01■□□□□ 0.79
NEK3-206ENST00000611833 MPHOSPH8Q99549 860 aa20.01■□□□□ 0.79
NEK3-206ENST00000611833 ATP6V1AP38606 617 aa20■□□□□ 0.79
NEK3-206ENST00000611833 GNL2Q13823 731 aaKnown RBP20■□□□□ 0.79
NEK3-206ENST00000611833 MAGEB6Q8N7X4 407 aa20■□□□□ 0.79
NEK3-206ENST00000611833 ACSBG1Q96GR2 724 aa20■□□□□ 0.79
NEK3-206ENST00000611833 UTP14AQ9BVJ6 771 aaKnown RBP20■□□□□ 0.79
NEK3-206ENST00000611833 EPB41L4AQ9HCS5 686 aaPredicted RBP20■□□□□ 0.79
NEK3-206ENST00000611833 KIAA1468Q9P260 1216 aa20■□□□□ 0.79
NEK3-206ENST00000611833 APOA5Q6Q788 366 aa19.99■□□□□ 0.79
NEK3-206ENST00000611833 MICU3Q86XE3 530 aa19.99■□□□□ 0.79
NEK3-206ENST00000611833 TMEM87BQ96K49 555 aa19.99■□□□□ 0.79
NEK3-206ENST00000611833 AIFM3Q96NN9 605 aa19.99■□□□□ 0.79
NEK3-206ENST00000611833 INCENPQ9NQS7 918 aa19.99■□□□□ 0.79
NEK3-206ENST00000611833 RIOK3O14730 519 aaKnown RBP19.99■□□□□ 0.79
NEK3-206ENST00000611833 CAMTA2O94983 1202 aa19.99■□□□□ 0.79
NEK3-206ENST00000611833 PHLPP1O60346 1717 aa19.99■□□□□ 0.79
NEK3-206ENST00000611833 ZBTB43O43298 467 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 ZNF202O95125 648 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 MBD4O95243 580 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 CDC27P30260 824 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 MAP3K12Q12852 859 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 ALX1Q15699 326 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 DDB1Q16531 1140 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 LRRC8AQ8IWT6 810 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 IFNL3Q8IZI9 196 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 IGDCC4Q8TDY8 1250 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 C16orf45Q96MC5 204 aaPredicted RBP19.98■□□□□ 0.79
NEK3-206ENST00000611833 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
NEK3-206ENST00000611833 PATL2C9JE40 543 aaKnown RBP19.98■□□□□ 0.79
NEK3-206ENST00000611833 SLC3A2P08195 630 aaKnown RBP19.98■□□□□ 0.79
NEK3-206ENST00000611833 RGS22Q8NE09 1264 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 PHKBQ93100 1093 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 NAPBQ9H115 298 aa19.98■□□□□ 0.79
NEK3-206ENST00000611833 SPATA31A1Q5TZJ5 1347 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 LOC102724428A0A0B4J2F2 783 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 NEMFO60524 1076 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 SIK1P57059 783 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 ITPK1Q13572 414 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 TMEM67Q5HYA8 995 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 KRT40Q6A162 431 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 ARMT1Q9H993 441 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 MYH14Q7Z406 1995 aaKnown RBP19.97■□□□□ 0.79
NEK3-206ENST00000611833 CMA1P23946 247 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 MARCKSP29966 332 aaPredicted RBP19.97■□□□□ 0.79
NEK3-206ENST00000611833 SLC39A14Q15043 492 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 TPD52L1Q16890 204 aaPredicted RBP19.97■□□□□ 0.79
NEK3-206ENST00000611833 FILIP1Q7Z7B0 1213 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 VPS37DQ86XT2 251 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 CDCA7Q9BWT1 371 aaPredicted RBP19.97■□□□□ 0.79
NEK3-206ENST00000611833 LY9Q9HBG7 655 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 TACC3Q9Y6A5 838 aa19.97■□□□□ 0.79
NEK3-206ENST00000611833 GOLGA8AA7E2F4 631 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 IARSP41252 1262 aaKnown RBP19.96■□□□□ 0.79
NEK3-206ENST00000611833 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 TRIM29Q14134 588 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 AXDND1Q5T1B0 1012 aaPredicted RBP19.96■□□□□ 0.79
NEK3-206ENST00000611833 RREB1Q92766 1687 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 ADAMTS2O95450 1211 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 NTSR2O95665 410 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 PFKFB1P16118 471 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 BCAMP50895 628 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 DPCR1Q3MIW9 517 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 CCDC152Q4G0S7 254 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 PARP10Q53GL7 1025 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 MARCH10Q8NA82 808 aaPredicted RBP19.96■□□□□ 0.79
NEK3-206ENST00000611833 ARID3AQ99856 593 aa19.96■□□□□ 0.79
NEK3-206ENST00000611833 CHD4Q14839 1912 aa19.95■□□□□ 0.78
NEK3-206ENST00000611833 BIN1O00499 593 aa19.95■□□□□ 0.78
NEK3-206ENST00000611833 TNNT1P13805 278 aa19.95■□□□□ 0.78
NEK3-206ENST00000611833 ARID5BQ14865 1188 aa19.95■□□□□ 0.78
NEK3-206ENST00000611833 SGMS1Q86VZ5 419 aa19.95■□□□□ 0.78
NEK3-206ENST00000611833 ZSWIM5Q9P217 1185 aa19.95■□□□□ 0.78
NEK3-206ENST00000611833 NIP7Q9Y221 180 aaKnown RBP eCLIP19.95■□□□□ 0.78
NEK3-206ENST00000611833 ECM29Q5VYK3 1845 aa19.95■□□□□ 0.78
NEK3-206ENST00000611833 GSG1L2A8MUP6 293 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 IFIT3O14879 490 aaKnown RBP19.94■□□□□ 0.78
NEK3-206ENST00000611833 WDHD1O75717 1129 aaPredicted RBP19.94■□□□□ 0.78
NEK3-206ENST00000611833 NTRK3Q16288 839 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 ZNF710Q8N1W2 664 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 JMYQ8N9B5 988 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 MYL10Q9BUA6 226 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 BCL2L12Q9HB09 334 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 FAM217BQ9NTX9 383 aaPredicted RBP19.94■□□□□ 0.78
NEK3-206ENST00000611833 SLC12A7Q9Y666 1083 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 NRAPQ86VF7 1730 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 CCDC69A6NI79 296 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 PRKAB2O43741 272 aa19.94■□□□□ 0.78
NEK3-206ENST00000611833 IGHMBP2P38935 993 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms