RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 SYT1P21579 422 aa21.53■■□□□ 1.04
SNAPC3-207ENST00000610884 PDE6BP35913 854 aa21.53■■□□□ 1.04
SNAPC3-207ENST00000610884 GTF2IP78347 998 aa21.53■■□□□ 1.04
SNAPC3-207ENST00000610884 CCDC144CPQ8IYA2 1237 aa21.53■■□□□ 1.04
SNAPC3-207ENST00000610884 INTS4Q96HW7 963 aaKnown RBP21.53■■□□□ 1.04
SNAPC3-207ENST00000610884 ATP6V0A2Q9Y487 856 aa21.53■■□□□ 1.04
SNAPC3-207ENST00000610884 ZNF804AQ7Z570 1209 aa21.53■■□□□ 1.04
SNAPC3-207ENST00000610884 RALYLQ86SE5 291 aaKnown RBP21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 CHMP4CQ96CF2 233 aa21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 MYL10Q9BUA6 226 aa21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 DBNDD1Q9H9R9 158 aa21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 ATF5Q9Y2D1 282 aaPredicted RBP21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 DOCK2Q92608 1830 aa21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 CYP2D6P10635 497 aa21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 DPP8Q6V1X1 898 aaPredicted RBP21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 FERMT3Q86UX7 667 aa21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 SP8Q8IXZ3 490 aa21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 MB21D2Q8IYB1 491 aaPredicted RBP21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 MPNDQ8N594 471 aa21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 MASTLQ96GX5 879 aa21.52■■□□□ 1.04
SNAPC3-207ENST00000610884 CACNA1SQ13698 1873 aa21.52■■□□□ 1.03
SNAPC3-207ENST00000610884 ATP2B4P23634 1241 aa21.51■■□□□ 1.03
SNAPC3-207ENST00000610884 MRE11P49959 708 aa21.51■■□□□ 1.03
SNAPC3-207ENST00000610884 NUCB2P80303 420 aa21.51■■□□□ 1.03
SNAPC3-207ENST00000610884 FAM173BQ6P4H8 233 aa21.51■■□□□ 1.03
SNAPC3-207ENST00000610884 NCOA7Q8NI08 942 aa21.51■■□□□ 1.03
SNAPC3-207ENST00000610884 PPP1R1BQ9UD71 204 aaPredicted RBP21.51■■□□□ 1.03
SNAPC3-207ENST00000610884 VPS37CA5D8V6 355 aaPredicted RBP21.51■■□□□ 1.03
SNAPC3-207ENST00000610884 H0YIN7 160 aa21.51■■□□□ 1.03
SNAPC3-207ENST00000610884 LDHBP07195 334 aaKnown RBP21.51■■□□□ 1.03
SNAPC3-207ENST00000610884 MFSD14BQ5SR56 506 aa21.5■■□□□ 1.03
SNAPC3-207ENST00000610884 ZSWIM5Q9P217 1185 aa21.5■■□□□ 1.03
SNAPC3-207ENST00000610884 ZSCAN31Q96LW9 406 aaPredicted RBP21.5■■□□□ 1.03
SNAPC3-207ENST00000610884 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.5■■□□□ 1.03
SNAPC3-207ENST00000610884 BAZ2AQ9UIF9 1905 aaKnown RBP21.5■■□□□ 1.03
SNAPC3-207ENST00000610884 BRD1O95696 1058 aa21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 GRPEL1Q9HAV7 217 aa21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 SH2B1Q9NRF2 756 aaPredicted RBP21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 USP17L12C9JPN9 530 aa21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 USP17L21D6R901 530 aa21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 ANKRD1Q15327 319 aa21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 TICAM2Q86XR7 235 aa21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 SH3RF3Q8TEJ3 882 aaPredicted RBP21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 ZC3H12CQ9C0D7 883 aaKnown RBP21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 COL11A2P13942 1736 aaPredicted RBP21.49■■□□□ 1.03
SNAPC3-207ENST00000610884 CHD4Q14839 1912 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 C21orf2O43822 256 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 PDIA3P30101 505 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 ALDH1B1P30837 517 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 MCM5P33992 734 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 TRDNQ13061 729 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 KLF18A0A0U1RQI7 1052 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 SEMA3EO15041 775 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 PRPF40AO75400 957 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 CTDNEP1O95476 244 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 HMGB1P09429 215 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 GTF3C6Q969F1 213 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 PODXL2Q9NZ53 605 aa21.48■■□□□ 1.03
SNAPC3-207ENST00000610884 STX6O43752 255 aa21.47■■□□□ 1.03
SNAPC3-207ENST00000610884 USP17L8P0C7I0 530 aa21.47■■□□□ 1.03
SNAPC3-207ENST00000610884 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
SNAPC3-207ENST00000610884 NACAP1Q9BZK3 213 aa21.47■■□□□ 1.03
SNAPC3-207ENST00000610884 SCNN1DP51172 638 aa21.47■■□□□ 1.03
SNAPC3-207ENST00000610884 PPARAQ07869 468 aa21.47■■□□□ 1.03
SNAPC3-207ENST00000610884 LARP1BQ659C4 914 aaKnown RBP21.47■■□□□ 1.03
SNAPC3-207ENST00000610884 GBP4Q96PP9 640 aa21.47■■□□□ 1.03
SNAPC3-207ENST00000610884 GJB4Q9NTQ9 266 aa21.47■■□□□ 1.03
SNAPC3-207ENST00000610884 CTR9Q6PD62 1173 aa21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 MFSD6Q6ZSS7 791 aa21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 SAP30BPQ9UHR5 308 aaKnown RBP21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 SLX4Q8IY92 1834 aa21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 UBE2Q2LH0YL09 131 aa21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 GUCY1B3Q02153 619 aa21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 CDC37L1Q7L3B6 337 aa21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 CERS5Q8N5B7 392 aa21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 WDR66Q8TBY9 1149 aa21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 PCDHAC2Q9Y5I4 1007 aa21.46■■□□□ 1.03
SNAPC3-207ENST00000610884 G3V3G9 751 aa21.45■■□□□ 1.02
SNAPC3-207ENST00000610884 AKNAD1Q5T1N1 836 aa21.45■■□□□ 1.02
SNAPC3-207ENST00000610884 DCAF8Q5TAQ9 597 aa21.45■■□□□ 1.02
SNAPC3-207ENST00000610884 IL1R1P14778 569 aa21.45■■□□□ 1.02
SNAPC3-207ENST00000610884 NCLP19338 710 aaKnown RBP21.45■■□□□ 1.02
SNAPC3-207ENST00000610884 CMTR1Q8N1G2 835 aaKnown RBP21.45■■□□□ 1.02
SNAPC3-207ENST00000610884 TGFBRAP1Q8WUH2 860 aa21.45■■□□□ 1.02
SNAPC3-207ENST00000610884 ALDH8A1Q9H2A2 487 aaPredicted RBP21.45■■□□□ 1.02
SNAPC3-207ENST00000610884 DCP1AQ9NPI6 582 aaPredicted RBP21.45■■□□□ 1.02
SNAPC3-207ENST00000610884 NMT2O60551 498 aa21.44■■□□□ 1.02
SNAPC3-207ENST00000610884 CCDC82Q8N4S0 544 aa21.44■■□□□ 1.02
SNAPC3-207ENST00000610884 PSDA5PKW4 1024 aaPredicted RBP21.44■■□□□ 1.02
SNAPC3-207ENST00000610884 GOLGA8BA8MQT2 603 aa21.44■■□□□ 1.02
SNAPC3-207ENST00000610884 OTUD7BQ6GQQ9 843 aa21.44■■□□□ 1.02
SNAPC3-207ENST00000610884 MICU3Q86XE3 530 aa21.44■■□□□ 1.02
SNAPC3-207ENST00000610884 MAPKAPK5Q8IW41 473 aa21.44■■□□□ 1.02
SNAPC3-207ENST00000610884 DYNLL2Q96FJ2 89 aa21.44■■□□□ 1.02
SNAPC3-207ENST00000610884 HPS5Q9UPZ3 1129 aa21.44■■□□□ 1.02
SNAPC3-207ENST00000610884 ADD1P35611 737 aaKnown RBP21.43■■□□□ 1.02
SNAPC3-207ENST00000610884 ALX1Q15699 326 aa21.43■■□□□ 1.02
SNAPC3-207ENST00000610884 FAM47AQ5JRC9 791 aa21.43■■□□□ 1.02
SNAPC3-207ENST00000610884 MCM9Q9NXL9 1143 aa21.43■■□□□ 1.02
SNAPC3-207ENST00000610884 SLURP2P0DP57 97 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms