RNA–Protein interactions for RNA: ENST00000604751.1

SNX30-203, Transcript of sorting nexin family member 30, humanhuman

TSL 2

Gene SNX30, Length 4,068 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-203ENST00000604751 GPRC5DQ9NZD1 345 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 CDC45O75419 566 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 CIAO1O76071 339 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 SLC1A4P43007 532 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 LRRC24Q50LG9 513 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 HOXA10P31260 410 aaPredicted RBP9.66□□□□□ -0.86
SNX30-203ENST00000604751 GTF2A2P52657 109 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 ANKRD35Q8N283 1001 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 CCDC12Q8WUD4 166 aaPredicted RBP9.66□□□□□ -0.86
SNX30-203ENST00000604751 DPF3Q92784 378 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 KRT23Q9C075 422 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 CNNM2Q9H8M5 875 aa9.66□□□□□ -0.86
SNX30-203ENST00000604751 ATP10DQ9P241 1426 aa9.65□□□□□ -0.86
SNX30-203ENST00000604751 SMARCA5O60264 1052 aaPredicted RBP9.65□□□□□ -0.86
SNX30-203ENST00000604751 FAM47CQ5HY64 1035 aa9.65□□□□□ -0.86
SNX30-203ENST00000604751 MFSD14CQ5VZR4 134 aa9.65□□□□□ -0.86
SNX30-203ENST00000604751 ADCY9O60503 1353 aa9.65□□□□□ -0.86
SNX30-203ENST00000604751 TBC1D9Q6ZT07 1266 aa9.65□□□□□ -0.86
SNX30-203ENST00000604751 ANKRD44Q8N8A2 993 aa9.65□□□□□ -0.86
SNX30-203ENST00000604751 CCDC47Q96A33 483 aaKnown RBP9.65□□□□□ -0.86
SNX30-203ENST00000604751 PUS3Q9BZE2 481 aaKnown RBP9.65□□□□□ -0.86
SNX30-203ENST00000604751 MTIF3Q9H2K0 278 aaKnown RBP9.65□□□□□ -0.86
SNX30-203ENST00000604751 PPP2R3BQ9Y5P8 575 aa9.65□□□□□ -0.86
SNX30-203ENST00000604751 COL16A1Q07092 1604 aaPredicted RBP9.65□□□□□ -0.86
SNX30-203ENST00000604751 CDKL5O76039 1030 aa9.65□□□□□ -0.87
SNX30-203ENST00000604751 FKBP1BP68106 108 aa9.65□□□□□ -0.87
SNX30-203ENST00000604751 AP5M1Q9H0R1 490 aa9.65□□□□□ -0.87
SNX30-203ENST00000604751 TRIM17Q9Y577 477 aa9.65□□□□□ -0.87
SNX30-203ENST00000604751 KDM4AO75164 1064 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 ICA1Q05084 483 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 ERICH6BQ5W0A0 696 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 SERPINB13Q9UIV8 391 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 RNF113AO15541 343 aaKnown RBP9.64□□□□□ -0.87
SNX30-203ENST00000604751 CA8P35219 290 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 PHKA1P46020 1223 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 HOMER1Q86YM7 354 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 USP44Q9H0E7 712 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 COPRSQ9NQ92 184 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 USP17L5A8MUK1 530 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 ZEB2O60315 1214 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 PRAMEF18Q5VWM3 479 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 CHD1LQ86WJ1 897 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 CKAP2LQ8IYA6 745 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 CDK5RAP3Q96JB5 506 aa9.64□□□□□ -0.87
SNX30-203ENST00000604751 CACNB3P54284 484 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 DGKZQ13574 1117 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 SMARCC2Q8TAQ2 1214 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 SLC12A7Q9Y666 1083 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 RAD50Q92878 1312 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 ATP2B1P20020 1258 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 RFX1P22670 979 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 FCGRTP55899 365 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 CCDC174Q6PII3 467 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 BLOC1S2Q6QNY1 142 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 TMTC2Q8N394 836 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 NALCNQ8IZF0 1738 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 ZAP70P43403 619 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 HAND2P61296 217 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 DIXDC1Q155Q3 683 aa9.63□□□□□ -0.87
SNX30-203ENST00000604751 SPP2Q13103 211 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 IFIT1BQ5T764 474 aaKnown RBP9.62□□□□□ -0.87
SNX30-203ENST00000604751 ANP32EQ9BTT0 268 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 PTPDC1A2A3K4 754 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 SLC9C1Q4G0N8 1177 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 SWAP70Q9UH65 585 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 TFRCP02786 760 aaKnown RBP9.62□□□□□ -0.87
SNX30-203ENST00000604751 OLFM4Q6UX06 510 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 EP400NLQ6ZTU2 488 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 ERO1BQ86YB8 467 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 ARMT1Q9H993 441 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 SAMM50Q9Y512 469 aa9.62□□□□□ -0.87
SNX30-203ENST00000604751 NOP56O00567 594 aaKnown RBP9.61□□□□□ -0.87
SNX30-203ENST00000604751 TMEM67Q5HYA8 995 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 HOXC10Q9NYD6 342 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 ARPP21Q9UBL0 812 aaPredicted RBP9.61□□□□□ -0.87
SNX30-203ENST00000604751 ZNF70Q9UC06 446 aaPredicted RBP9.61□□□□□ -0.87
SNX30-203ENST00000604751 FKTNO75072 461 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 ZNF853P0CG23 659 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 TMED8Q6PL24 325 aaPredicted RBP9.61□□□□□ -0.87
SNX30-203ENST00000604751 WASF1Q92558 559 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 APPBP2Q92624 585 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 HOMER2Q9NSB8 354 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 CEMIPQ8WUJ3 1361 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 LPXNO60711 386 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 IGKV5-2P06315 115 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 DHX37Q8IY37 1157 aaKnown RBP9.61□□□□□ -0.87
SNX30-203ENST00000604751 GTF3C2Q8WUA4 911 aaPredicted RBP9.61□□□□□ -0.87
SNX30-203ENST00000604751 KIFC2Q96AC6 838 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 KRT18P05783 430 aaKnown RBP9.61□□□□□ -0.87
SNX30-203ENST00000604751 HDLBPQ00341 1268 aaKnown RBP9.61□□□□□ -0.87
SNX30-203ENST00000604751 WTAPQ15007 396 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 MCMDC2Q4G0Z9 681 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 NCOA7Q8NI08 942 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 CDCA5Q96FF9 252 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 CYP46A1Q9Y6A2 500 aa9.61□□□□□ -0.87
SNX30-203ENST00000604751 KDM6AO15550 1401 aaPredicted RBP9.61□□□□□ -0.87
SNX30-203ENST00000604751 SPDYE3A6NKU9 549 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms