RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 MEIS3Q99687 375 aa22.44■■□□□ 1.18
CHMP2A-208ENST00000601220 SALL1Q9NSC2 1324 aa22.44■■□□□ 1.18
CHMP2A-208ENST00000601220 ZNF112Q9UJU3 913 aa22.44■■□□□ 1.18
CHMP2A-208ENST00000601220 IRF6O14896 467 aa22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 PHKA1P46020 1223 aa22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 NFIAQ12857 509 aa22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 TAF1CQ15572 869 aaPredicted RBP22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 PRPF38BQ5VTL8 546 aaKnown RBP22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 INTS3Q68E01 1043 aaKnown RBP22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 MIGA2Q7L4E1 593 aa22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 ARMC5Q96C12 935 aa22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 HOOK2Q96ED9 719 aa22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 ZFYVE28Q9HCC9 887 aa22.43■■□□□ 1.18
CHMP2A-208ENST00000601220 POTEFA5A3E0 1075 aa22.42■■□□□ 1.18
CHMP2A-208ENST00000601220 PPIL2Q13356 520 aa22.42■■□□□ 1.18
CHMP2A-208ENST00000601220 DCAF15Q66K64 600 aa22.42■■□□□ 1.18
CHMP2A-208ENST00000601220 FAM198AQ9UFP1 575 aa22.42■■□□□ 1.18
CHMP2A-208ENST00000601220 BTBD19C9JJ37 291 aa22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 CCER2I3L3R5 266 aa22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 SEMA3EO15041 775 aa22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 CETPP11597 493 aa22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 ADORA1P30542 326 aa22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 INPP5BP32019 993 aa22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 ARHGAP45Q92619 1136 aa22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 ZNF341Q9BYN7 854 aa22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 ZCCHC17Q9NP64 241 aaKnown RBP22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 GNL3LQ9NVN8 582 aaKnown RBP22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 DENND2AQ9ULE3 1009 aa22.41■■□□□ 1.18
CHMP2A-208ENST00000601220 LDHBP07195 334 aaKnown RBP22.4■■□□□ 1.18
CHMP2A-208ENST00000601220 PPATQ06203 517 aa22.4■■□□□ 1.18
CHMP2A-208ENST00000601220 SNAPC2Q13487 334 aa22.4■■□□□ 1.18
CHMP2A-208ENST00000601220 CCDC102BQ68D86 513 aa22.4■■□□□ 1.18
CHMP2A-208ENST00000601220 ZFPM1Q8IX07 1006 aa22.4■■□□□ 1.18
CHMP2A-208ENST00000601220 HDAC5Q9UQL6 1122 aa22.4■■□□□ 1.18
CHMP2A-208ENST00000601220 TLR2O60603 784 aa22.39■■□□□ 1.17
CHMP2A-208ENST00000601220 TCP10Q12799 353 aa22.39■■□□□ 1.17
CHMP2A-208ENST00000601220 USP40Q9NVE5 1235 aa22.39■■□□□ 1.17
CHMP2A-208ENST00000601220 TIMM10P62072 90 aa22.38■■□□□ 1.17
CHMP2A-208ENST00000601220 MTX1Q13505 466 aa22.37■■□□□ 1.17
CHMP2A-208ENST00000601220 MOGSQ13724 837 aa22.37■■□□□ 1.17
CHMP2A-208ENST00000601220 KCNH4Q9UQ05 1017 aa22.37■■□□□ 1.17
CHMP2A-208ENST00000601220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.37■■□□□ 1.17
CHMP2A-208ENST00000601220 ATRNL1Q5VV63 1379 aa22.37■■□□□ 1.17
CHMP2A-208ENST00000601220 GAKO14976 1311 aa22.36■■□□□ 1.17
CHMP2A-208ENST00000601220 RASGRF1Q13972 1273 aa22.36■■□□□ 1.17
CHMP2A-208ENST00000601220 NOL9Q5SY16 702 aaKnown RBP22.36■■□□□ 1.17
CHMP2A-208ENST00000601220 ZNF333Q96JL9 665 aa22.36■■□□□ 1.17
CHMP2A-208ENST00000601220 IDI2Q9BXS1 227 aa22.36■■□□□ 1.17
CHMP2A-208ENST00000601220 ARHGAP39Q9C0H5 1083 aa22.36■■□□□ 1.17
CHMP2A-208ENST00000601220 PTCH2Q9Y6C5 1203 aa22.36■■□□□ 1.17
CHMP2A-208ENST00000601220 PDS5AQ29RF7 1337 aaKnown RBP22.35■■□□□ 1.17
CHMP2A-208ENST00000601220 C17orf99Q6UX52 265 aa22.35■■□□□ 1.17
CHMP2A-208ENST00000601220 SH3BP5LQ7L8J4 393 aa22.35■■□□□ 1.17
CHMP2A-208ENST00000601220 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
CHMP2A-208ENST00000601220 RFX7Q2KHR2 1363 aa22.35■■□□□ 1.17
CHMP2A-208ENST00000601220 CENPFP49454 3210 aa22.35■■□□□ 1.17
CHMP2A-208ENST00000601220 PHF20L1A8MW92 1017 aa22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 SRGAP3O43295 1099 aa22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 GNAI3P08754 354 aa22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 EN2P19622 333 aaPredicted RBP22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 LACTBP83111 547 aaPredicted RBP22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 TFCP2Q12800 502 aa22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 ARHGEF6Q15052 776 aa22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 ANKRD23Q86SG2 305 aa22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 FAM163AQ96GL9 167 aaPredicted RBP22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 XAGE2Q96GT9 111 aa22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 TNNQ9UQP3 1299 aa22.34■■□□□ 1.17
CHMP2A-208ENST00000601220 BRCA2P51587 3418 aa22.33■■□□□ 1.17
CHMP2A-208ENST00000601220 A0A1B0GUL7 405 aa22.33■■□□□ 1.17
CHMP2A-208ENST00000601220 MAP3K10Q02779 954 aa22.33■■□□□ 1.17
CHMP2A-208ENST00000601220 ZGPATQ8N5A5 531 aaKnown RBP22.33■■□□□ 1.17
CHMP2A-208ENST00000601220 ADGRA2Q96PE1 1338 aa22.32■■□□□ 1.16
CHMP2A-208ENST00000601220 ENTPD3O75355 529 aa22.32■■□□□ 1.16
CHMP2A-208ENST00000601220 TRIM27P14373 513 aa22.32■■□□□ 1.16
CHMP2A-208ENST00000601220 CTGFP29279 349 aa22.32■■□□□ 1.16
CHMP2A-208ENST00000601220 RGS3P49796 1198 aa22.32■■□□□ 1.16
CHMP2A-208ENST00000601220 ZNF384Q8TF68 577 aa22.32■■□□□ 1.16
CHMP2A-208ENST00000601220 WDHD1O75717 1129 aaPredicted RBP22.31■■□□□ 1.16
CHMP2A-208ENST00000601220 AKAP2Q9Y2D5 859 aa22.31■■□□□ 1.16
CHMP2A-208ENST00000601220 MKI67P46013 3256 aaKnown RBP22.31■■□□□ 1.16
CHMP2A-208ENST00000601220 MYH13Q9UKX3 1938 aa22.31■■□□□ 1.16
CHMP2A-208ENST00000601220 PDHXO00330 501 aa22.3■■□□□ 1.16
CHMP2A-208ENST00000601220 BCAR3O75815 825 aa22.3■■□□□ 1.16
CHMP2A-208ENST00000601220 SLURP2P0DP57 97 aa22.3■■□□□ 1.16
CHMP2A-208ENST00000601220 GPAT2Q6NUI2 795 aa22.3■■□□□ 1.16
CHMP2A-208ENST00000601220 DDX4Q9NQI0 724 aaKnown RBP22.3■■□□□ 1.16
CHMP2A-208ENST00000601220 ABCF2Q9UG63 623 aa22.3■■□□□ 1.16
CHMP2A-208ENST00000601220 CPA4Q9UI42 421 aa22.3■■□□□ 1.16
CHMP2A-208ENST00000601220 DDTLA6NHG4 134 aaPredicted RBP22.29■■□□□ 1.16
CHMP2A-208ENST00000601220 CXCL11O14625 94 aa22.29■■□□□ 1.16
CHMP2A-208ENST00000601220 SLC9C1Q4G0N8 1177 aa22.29■■□□□ 1.16
CHMP2A-208ENST00000601220 RBBP6Q7Z6E9 1792 aaKnown RBP22.29■■□□□ 1.16
CHMP2A-208ENST00000601220 GPR75-ASB3A0A0A6YYF3 556 aa22.28■■□□□ 1.16
CHMP2A-208ENST00000601220 GNRH1P01148 92 aa22.28■■□□□ 1.16
CHMP2A-208ENST00000601220 RHBDL3P58872 404 aa22.28■■□□□ 1.16
CHMP2A-208ENST00000601220 MECOMQ03112 1051 aa22.28■■□□□ 1.16
CHMP2A-208ENST00000601220 MVPQ14764 893 aaKnown RBP22.28■■□□□ 1.16
CHMP2A-208ENST00000601220 ATF7IPQ6VMQ6 1270 aa22.28■■□□□ 1.16
CHMP2A-208ENST00000601220 NBPF11Q86T75 865 aa22.28■■□□□ 1.16
CHMP2A-208ENST00000601220 DZIP1Q86YF9 867 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms