RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 TDO2P48775 406 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 SART3Q15020 963 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 MYSM1Q5VVJ2 828 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 LINC00301Q8NCQ3 95 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 LINC00116Q8NCU8 138 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 ENGASEQ8NFI3 743 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 TDRD7Q8NHU6 1098 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 MRPS27Q92552 414 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 RNF41Q9H4P4 317 aaPredicted RBP22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 LY9Q9HBG7 655 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 CCDC69A6NI79 296 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 IFIT3O14879 490 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 ZNF165P49910 485 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 SNW1Q13573 536 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 VPS72Q15906 364 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 ERFEQ4G0M1 354 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 SLC10A5Q5PT55 438 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 OTUD7BQ6GQQ9 843 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 RAB11FIP4Q86YS3 637 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 STAG1Q8WVM7 1258 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 ALG1Q9BT22 464 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 PCDHA7Q9UN72 937 aa22.3■■□□□ 1.16
PRKCSH-209ENST00000589838 ZNF804BA4D1E1 1349 aa22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 GOLGA8AA7E2F4 631 aa22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 KIF23Q02241 960 aaPredicted RBP22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 STX1AQ16623 288 aa22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 FAM98CQ17RN3 349 aaKnown RBP22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 CAVIN4Q5BKX8 364 aa22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 RC3H1Q5TC82 1133 aaKnown RBP22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 LUZP1Q86V48 1076 aa22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 TMTC2Q8N394 836 aa22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 NYXQ9GZU5 481 aa22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 GOLPH3LQ9H4A5 285 aa22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 ANO8Q9HCE9 1232 aaPredicted RBP22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 SLC12A7Q9Y666 1083 aa22.29■■□□□ 1.16
PRKCSH-209ENST00000589838 GTF2E1P29083 439 aaPredicted RBP22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 CTDSPL2Q05D32 466 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 ZSWIM5Q9P217 1185 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 DENND2AQ9ULE3 1009 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 BCL9LQ86UU0 1499 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 SPTLC2O15270 562 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 AP5Z1O43299 807 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 POLR3DP05423 398 aaPredicted RBP22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 IARSP41252 1262 aaKnown RBP22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 PIP4K2BP78356 416 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 TRIM29Q14134 588 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 LCORLQ8N3X6 602 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 WASF1Q92558 559 aa22.28■■□□□ 1.16
PRKCSH-209ENST00000589838 A0A1B0GUL6 1792 aa22.27■■□□□ 1.16
PRKCSH-209ENST00000589838 CYP7A1P22680 504 aa22.27■■□□□ 1.16
PRKCSH-209ENST00000589838 MICU3Q86XE3 530 aa22.27■■□□□ 1.16
PRKCSH-209ENST00000589838 STK36Q9NRP7 1315 aa22.27■■□□□ 1.16
PRKCSH-209ENST00000589838 ERICH2A1L162 156 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 ANO1Q5XXA6 986 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 DNAJC25Q9H1X3 360 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 ANO10Q9NW15 660 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 CLIC4Q9Y696 253 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 SCN7AQ01118 1682 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 CASZ1Q86V15 1759 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 NID2Q14112 1375 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 SSRP1Q08945 709 aaKnown RBP22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 FMR1NBQ8N0W7 255 aaPredicted RBP22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 PIBF1Q8WXW3 757 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 NGLY1Q96IV0 654 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 RAI14Q9P0K7 980 aa22.26■■□□□ 1.15
PRKCSH-209ENST00000589838 MAGEB6P1A0A0J9YX57 407 aa22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 GOLGA6L19H0YKK7 550 aa22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 SEMA3EO15041 775 aa22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 PRKAB2O43741 272 aa22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 CDC27P30260 824 aa22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 RCAN1P53805 252 aa22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 GNL2Q13823 731 aaKnown RBP22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 KRT40Q6A162 431 aa22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 VPS37DQ86XT2 251 aa22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 NARFQ9UHQ1 456 aa22.25■■□□□ 1.15
PRKCSH-209ENST00000589838 RPS6KA4O75676 772 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 NTRK3Q16288 839 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 JMYQ8N9B5 988 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 MINPP1Q9UNW1 487 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 CCDC196A0A1B0GTZ2 297 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 WTAPQ15007 396 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 NKX2-3Q8TAU0 364 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 SDF4Q9BRK5 362 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 TOMM22Q9NS69 142 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 ABCF2Q9UG63 623 aa22.24■■□□□ 1.15
PRKCSH-209ENST00000589838 KIF28PB7ZC32 967 aa22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 IFNAR1P17181 557 aa22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 GYG1P46976 350 aa22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 MIGA1Q8NAN2 632 aa22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 NLRP3Q96P20 1036 aa22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 SETDB2Q96T68 719 aa22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 TRIM5Q9C035 493 aa22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 NAT10Q9H0A0 1025 aaKnown RBP22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 TTC12Q9H892 705 aaPredicted RBP22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 SENP2Q9HC62 589 aa22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 ANAPC4Q9UJX5 808 aa22.23■■□□□ 1.15
PRKCSH-209ENST00000589838 FMNL1O95466 1100 aaPredicted RBP22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 RXRAP19793 462 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms