RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	DOCK2	Q92608	1830 aa		18.88	■□□□□ 0.61
SREBF1-222	ENST00000583732	ECM2	O94769	699 aa	Predicted RBP	18.87	■□□□□ 0.61
SREBF1-222	ENST00000583732	INPP5B	P32019	993 aa		18.87	■□□□□ 0.61
SREBF1-222	ENST00000583732	INTS3	Q68E01	1043 aa	Known RBP	18.87	■□□□□ 0.61
SREBF1-222	ENST00000583732	ZNF341	Q9BYN7	854 aa		18.87	■□□□□ 0.61
SREBF1-222	ENST00000583732	CEP126	Q9P2H0	1117 aa		18.87	■□□□□ 0.61
SREBF1-222	ENST00000583732	MYH2	Q9UKX2	1941 aa		18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	BTBD19	C9JJ37	291 aa		18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	IRF6	O14896	467 aa		18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	CETP	P11597	493 aa		18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	PHKA1	P46020	1223 aa		18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	NFIA	Q12857	509 aa		18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	CDC42EP5	Q6NZY7	148 aa		18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	FAM151A	Q8WW52	585 aa		18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	API5	Q9BZZ5	524 aa	Known RBP	18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	GNL3L	Q9NVN8	582 aa	Known RBP	18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	PTCH2	Q9Y6C5	1203 aa		18.86	■□□□□ 0.61
SREBF1-222	ENST00000583732	WDHD1	O75717	1129 aa	Predicted RBP	18.85	■□□□□ 0.61
SREBF1-222	ENST00000583732	CIAO1	O76071	339 aa		18.85	■□□□□ 0.61
SREBF1-222	ENST00000583732	LDHB	P07195	334 aa	Known RBP	18.85	■□□□□ 0.61
SREBF1-222	ENST00000583732	ADORA1	P30542	326 aa		18.85	■□□□□ 0.61
SREBF1-222	ENST00000583732	PPIL2	Q13356	520 aa		18.85	■□□□□ 0.61
SREBF1-222	ENST00000583732	SNAPC2	Q13487	334 aa		18.85	■□□□□ 0.61
SREBF1-222	ENST00000583732	TRMT2A	Q8IZ69	625 aa	Known RBP	18.85	■□□□□ 0.61
SREBF1-222	ENST00000583732	ARMC5	Q96C12	935 aa		18.85	■□□□□ 0.61
SREBF1-222	ENST00000583732	MEIS3	Q99687	375 aa		18.85	■□□□□ 0.61
SREBF1-222	ENST00000583732	IL15	P40933	162 aa	Predicted RBP	18.84	■□□□□ 0.61
SREBF1-222	ENST00000583732	ARHGAP39	Q9C0H5	1083 aa		18.84	■□□□□ 0.61
SREBF1-222	ENST00000583732	USP40	Q9NVE5	1235 aa		18.84	■□□□□ 0.61
SREBF1-222	ENST00000583732	FBXO3	Q9UK99	471 aa		18.84	■□□□□ 0.61
SREBF1-222	ENST00000583732	CENPF	P49454	3210 aa		18.83	■□□□□ 0.61
SREBF1-222	ENST00000583732	MYC	P01106	439 aa	Predicted RBP	18.83	■□□□□ 0.6
SREBF1-222	ENST00000583732	EN2	P19622	333 aa	Predicted RBP	18.83	■□□□□ 0.6
SREBF1-222	ENST00000583732	ARHGEF6	Q15052	776 aa		18.83	■□□□□ 0.6
SREBF1-222	ENST00000583732	SLC9C1	Q4G0N8	1177 aa		18.83	■□□□□ 0.6
SREBF1-222	ENST00000583732	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.83	■□□□□ 0.6
SREBF1-222	ENST00000583732	FAM198A	Q9UFP1	575 aa		18.83	■□□□□ 0.6
SREBF1-222	ENST00000583732	DENND2A	Q9ULE3	1009 aa		18.83	■□□□□ 0.6
SREBF1-222	ENST00000583732	TLR2	O60603	784 aa		18.82	■□□□□ 0.6
SREBF1-222	ENST00000583732	PPAT	Q06203	517 aa		18.82	■□□□□ 0.6
SREBF1-222	ENST00000583732	CT47B1	P0C2W7	299 aa	Predicted RBP	18.81	■□□□□ 0.6
SREBF1-222	ENST00000583732	KIF22	Q14807	665 aa		18.81	■□□□□ 0.6
SREBF1-222	ENST00000583732	CCDC102B	Q68D86	513 aa		18.81	■□□□□ 0.6
SREBF1-222	ENST00000583732	ZFPM1	Q8IX07	1006 aa		18.81	■□□□□ 0.6
SREBF1-222	ENST00000583732	ZNF333	Q96JL9	665 aa		18.81	■□□□□ 0.6
SREBF1-222	ENST00000583732	SALL1	Q9NSC2	1324 aa		18.8	■□□□□ 0.6
SREBF1-222	ENST00000583732	SEMA3E	O15041	775 aa		18.8	■□□□□ 0.6
SREBF1-222	ENST00000583732	DZIP1	Q86YF9	867 aa	Known RBP	18.8	■□□□□ 0.6
SREBF1-222	ENST00000583732	TMEM106C	Q9BVX2	250 aa		18.8	■□□□□ 0.6
SREBF1-222	ENST00000583732	ZCCHC17	Q9NP64	241 aa	Known RBP	18.8	■□□□□ 0.6
SREBF1-222	ENST00000583732	COPRS	Q9NQ92	184 aa		18.8	■□□□□ 0.6
SREBF1-222	ENST00000583732	ABCF2	Q9UG63	623 aa		18.8	■□□□□ 0.6
SREBF1-222	ENST00000583732	CPA4	Q9UI42	421 aa		18.8	■□□□□ 0.6
SREBF1-222	ENST00000583732	HDAC5	Q9UQL6	1122 aa		18.8	■□□□□ 0.6
SREBF1-222	ENST00000583732	RGS3	P49796	1198 aa		18.79	■□□□□ 0.6
SREBF1-222	ENST00000583732	RARS	P54136	660 aa	Known RBP	18.79	■□□□□ 0.6
SREBF1-222	ENST00000583732	TIMM10	P62072	90 aa		18.79	■□□□□ 0.6
SREBF1-222	ENST00000583732	LACTB	P83111	547 aa	Predicted RBP	18.79	■□□□□ 0.6
SREBF1-222	ENST00000583732	SH3TC2	Q8TF17	1288 aa		18.79	■□□□□ 0.6
SREBF1-222	ENST00000583732	ZNF112	Q9UJU3	913 aa		18.79	■□□□□ 0.6
SREBF1-222	ENST00000583732	PDHX	O00330	501 aa		18.78	■□□□□ 0.6
SREBF1-222	ENST00000583732	SRGAP3	O43295	1099 aa		18.78	■□□□□ 0.6
SREBF1-222	ENST00000583732	TFCP2	Q12800	502 aa		18.78	■□□□□ 0.6
SREBF1-222	ENST00000583732	RASGRF1	Q13972	1273 aa		18.78	■□□□□ 0.6
SREBF1-222	ENST00000583732	SLC4A8	Q2Y0W8	1093 aa		18.78	■□□□□ 0.6
SREBF1-222	ENST00000583732	NBPF11	Q86T75	865 aa		18.78	■□□□□ 0.6
SREBF1-222	ENST00000583732	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.78	■□□□□ 0.6
SREBF1-222	ENST00000583732	ZGPAT	Q8N5A5	531 aa	Known RBP	18.78	■□□□□ 0.6
SREBF1-222	ENST00000583732	DOCK1	Q14185	1865 aa		18.77	■□□□□ 0.6
SREBF1-222	ENST00000583732		A0A1B0GUL7	405 aa		18.77	■□□□□ 0.6
SREBF1-222	ENST00000583732	PICALM	Q13492	652 aa		18.77	■□□□□ 0.6
SREBF1-222	ENST00000583732	NOL9	Q5SY16	702 aa	Known RBP	18.77	■□□□□ 0.6
SREBF1-222	ENST00000583732	ANKRD23	Q86SG2	305 aa		18.77	■□□□□ 0.6
SREBF1-222	ENST00000583732	KCNH4	Q9UQ05	1017 aa		18.77	■□□□□ 0.6
SREBF1-222	ENST00000583732	TNN	Q9UQP3	1299 aa		18.77	■□□□□ 0.6
SREBF1-222	ENST00000583732	BRCA2	P51587	3418 aa		18.77	■□□□□ 0.59
SREBF1-222	ENST00000583732	GAK	O14976	1311 aa		18.76	■□□□□ 0.59
SREBF1-222	ENST00000583732	KIAA0100	Q14667	2235 aa	Known RBP	18.76	■□□□□ 0.59
SREBF1-222	ENST00000583732	GNAI3	P08754	354 aa		18.76	■□□□□ 0.59
SREBF1-222	ENST00000583732	SLURP2	P0DP57	97 aa		18.76	■□□□□ 0.59
SREBF1-222	ENST00000583732	BTD	P43251	543 aa		18.76	■□□□□ 0.59
SREBF1-222	ENST00000583732	C17orf99	Q6UX52	265 aa		18.76	■□□□□ 0.59
SREBF1-222	ENST00000583732	XAGE2	Q96GT9	111 aa		18.76	■□□□□ 0.59
SREBF1-222	ENST00000583732	RFX7	Q2KHR2	1363 aa		18.76	■□□□□ 0.59
SREBF1-222	ENST00000583732	ATRNL1	Q5VV63	1379 aa		18.76	■□□□□ 0.59
SREBF1-222	ENST00000583732	MGAM	O43451	1857 aa		18.75	■□□□□ 0.59
SREBF1-222	ENST00000583732	CTGF	P29279	349 aa		18.75	■□□□□ 0.59
SREBF1-222	ENST00000583732	MOGS	Q13724	837 aa		18.75	■□□□□ 0.59
SREBF1-222	ENST00000583732	SH3BP5L	Q7L8J4	393 aa		18.75	■□□□□ 0.59
SREBF1-222	ENST00000583732	NEUROD6	Q96NK8	337 aa		18.75	■□□□□ 0.59
SREBF1-222	ENST00000583732	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	18.75	■□□□□ 0.59
SREBF1-222	ENST00000583732	MKI67	P46013	3256 aa	Known RBP	18.75	■□□□□ 0.59
SREBF1-222	ENST00000583732	ADGRA2	Q96PE1	1338 aa		18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	PHIP	Q8WWQ0	1821 aa		18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	PTPRF	P10586	1907 aa		18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	ENTPD3	O75355	529 aa		18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	PSMC4	P43686	418 aa		18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	MVP	Q14764	893 aa	Known RBP	18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	FRAT1	Q92837	279 aa	Predicted RBP	18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	IDI2	Q9BXS1	227 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms