RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 NBPF14Q5TI25 921 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 CWF19L1Q69YN2 538 aaKnown RBP10.65□□□□□ -0.7
SKA2-207ENST00000583380 CEP85Q6P2H3 762 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 FOXR1Q6PIV2 292 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 MTHFD1LQ6UB35 978 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 RINLQ6ZS11 566 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 LMBR1Q8WVP7 490 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 KIFC2Q96AC6 838 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 GDAP1L1Q96MZ0 367 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 CARD14Q9BXL6 1004 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 EBF2Q9HAK2 575 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 SLC24A3Q9HC58 644 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 GMEB1Q9Y692 573 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 NUP153P49790 1475 aaKnown RBP10.65□□□□□ -0.7
SKA2-207ENST00000583380 ZFYVE9O95405 1425 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 NSD3Q9BZ95 1437 aa10.65□□□□□ -0.7
SKA2-207ENST00000583380 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.71
SKA2-207ENST00000583380 MGRN1O60291 552 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 DNAJC8O75937 253 aaPredicted RBP10.64□□□□□ -0.71
SKA2-207ENST00000583380 VIMP08670 466 aaKnown RBP10.64□□□□□ -0.71
SKA2-207ENST00000583380 KIF5BP33176 963 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 NLRP12P59046 1061 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 PSMD2Q13200 908 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 CUL3Q13618 768 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 KRT32Q14532 448 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 LACTB2Q53H82 288 aaPredicted RBP10.64□□□□□ -0.71
SKA2-207ENST00000583380 HDGFL1Q5TGJ6 251 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 HHATQ5VTY9 493 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 PPP4R3AQ6IN85 833 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 CYB5D1Q6P9G0 228 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 CACNA2D4Q7Z3S7 1137 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 ARHGAP22Q7Z5H3 698 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 CEP57Q86XR8 500 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 VSTM4Q8IW00 320 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 CNTROBQ8N137 903 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 IGSF22Q8N9C0 903 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 HDAC7Q8WUI4 952 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 TSR2Q969E8 191 aaKnown RBP10.64□□□□□ -0.71
SKA2-207ENST00000583380 TBC1D31Q96DN5 1066 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 TRIM7Q9C029 511 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 XPO4Q9C0E2 1151 aaKnown RBP10.64□□□□□ -0.71
SKA2-207ENST00000583380 KIF9Q9HAQ2 790 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 IFNKQ9P0W0 207 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 ANKIB1Q9P2G1 1089 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 HPCAL4Q9UM19 191 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 ATP10DQ9P241 1426 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 INO80Q9ULG1 1556 aaPredicted RBP10.64□□□□□ -0.71
SKA2-207ENST00000583380 ARHGEF10O15013 1369 aa10.64□□□□□ -0.71
SKA2-207ENST00000583380 E7ENQ6 273 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 PFKFB2O60825 505 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 NR1I2O75469 434 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 SYF2O95926 243 aaKnown RBP10.63□□□□□ -0.71
SKA2-207ENST00000583380 UBASH3AP57075 661 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 GNGT1P63211 74 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 FANCCQ00597 558 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 DEUP1Q05D60 604 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 MKRN4PQ13434 485 aaPredicted RBP10.63□□□□□ -0.71
SKA2-207ENST00000583380 TBC1D25Q3MII6 688 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 PLEKHO1Q53GL0 409 aaPredicted RBP10.63□□□□□ -0.71
SKA2-207ENST00000583380 EMBQ6PCB8 327 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 RUFY3Q7L099 469 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 ARHGAP18Q8N392 663 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 GALNT15Q8N3T1 639 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 AOPEPQ8N6M6 819 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 EZH1Q92800 747 aaPredicted RBP10.63□□□□□ -0.71
SKA2-207ENST00000583380 CCDC97Q96F63 343 aaPredicted RBP10.63□□□□□ -0.71
SKA2-207ENST00000583380 MPHOSPH6Q99547 160 aaKnown RBP10.63□□□□□ -0.71
SKA2-207ENST00000583380 TSC22D3Q99576 134 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 NAPGQ99747 312 aaPredicted RBP10.63□□□□□ -0.71
SKA2-207ENST00000583380 SDF4Q9BRK5 362 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 CCDC28BQ9BUN5 200 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 KDM4CQ9H3R0 1056 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 SLC40A1Q9NP59 571 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 NOP53Q9NZM5 478 aaKnown RBP10.63□□□□□ -0.71
SKA2-207ENST00000583380 HMG20BQ9P0W2 317 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 PCDHGA4Q9Y5G9 962 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 TRPM2O94759 1503 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 LMTK2Q8IWU2 1503 aa10.63□□□□□ -0.71
SKA2-207ENST00000583380 STXBP3O00186 592 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 FLOT1O75955 427 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 FAM107AO95990 144 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 CCNG1P51959 295 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 NAP1L1P55209 391 aaKnown RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 MRPS35P82673 323 aaKnown RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 TAF7Q15545 349 aaPredicted RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 WASHC4Q2M389 1173 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 FOXD4L6Q3SYB3 417 aaPredicted RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 C1QTNF12Q5T7M4 302 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 ACBD5Q5T8D3 534 aaPredicted RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 OLFM4Q6UX06 510 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 FOXD4L3Q6VB84 417 aaPredicted RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 SYNE3Q6ZMZ3 975 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 NFXL1Q6ZNB6 911 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 CCDC13Q8IYE1 715 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 RNF168Q8IYW5 571 aaPredicted RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 JAKMIP2Q96AA8 810 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 CHAMP1Q96JM3 812 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 PLEKHG4BQ96PX9 1271 aa10.62□□□□□ -0.71
SKA2-207ENST00000583380 RANBP17Q9H2T7 1088 aaKnown RBP10.62□□□□□ -0.71
SKA2-207ENST00000583380 KAT14Q9H8E8 782 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms