RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 LARP1BQ659C4 914 aaKnown RBP13.21□□□□□ -0.3
GGA3-213ENST00000582486 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.3
GGA3-213ENST00000582486 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.3
GGA3-213ENST00000582486 MASTLQ96GX5 879 aa13.21□□□□□ -0.3
GGA3-213ENST00000582486 AATFQ9NY61 560 aaKnown RBP eCLIP13.21□□□□□ -0.3
GGA3-213ENST00000582486 SALL1Q9NSC2 1324 aa13.2□□□□□ -0.3
GGA3-213ENST00000582486 EVCP57679 992 aa13.2□□□□□ -0.3
GGA3-213ENST00000582486 AKNAD1Q5T1N1 836 aa13.2□□□□□ -0.3
GGA3-213ENST00000582486 DEFB132Q7Z7B7 95 aa13.2□□□□□ -0.3
GGA3-213ENST00000582486 DZIP1Q86YF9 867 aaKnown RBP13.2□□□□□ -0.3
GGA3-213ENST00000582486 NCOA5Q9HCD5 579 aaKnown RBP13.2□□□□□ -0.3
GGA3-213ENST00000582486 MTMR6Q9Y217 621 aa13.2□□□□□ -0.3
GGA3-213ENST00000582486 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
GGA3-213ENST00000582486 LDHBP07195 334 aaKnown RBP13.19□□□□□ -0.3
GGA3-213ENST00000582486 IL1R1P14778 569 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 GRIK5Q16478 980 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 ZNF622Q969S3 477 aaKnown RBP eCLIP13.19□□□□□ -0.37e-7■■□□□ 12.1
GGA3-213ENST00000582486 GZF1Q9H116 711 aaPredicted RBP13.19□□□□□ -0.3
GGA3-213ENST00000582486 LMBRD1Q9NUN5 540 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 VPS37CA5D8V6 355 aaPredicted RBP13.19□□□□□ -0.3
GGA3-213ENST00000582486 MINDY4BA8MYZ0 360 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 PRPF40AO75400 957 aaKnown RBP13.19□□□□□ -0.3
GGA3-213ENST00000582486 F13A1P00488 732 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 PPARAQ07869 468 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 SF3B2Q13435 895 aaKnown RBP13.19□□□□□ -0.3
GGA3-213ENST00000582486 MFSD6Q6ZSS7 791 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
GGA3-213ENST00000582486 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 SKOR2Q2VWA4 1001 aaPredicted RBP13.18□□□□□ -0.3
GGA3-213ENST00000582486 STAG1Q8WVM7 1258 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 PDGFDQ9GZP0 370 aaPredicted RBP13.18□□□□□ -0.3
GGA3-213ENST00000582486 ZSWIM5Q9P217 1185 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 LRRC37AA6NMS7 1700 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 CCDC88AQ3V6T2 1871 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 KLF18A0A0U1RQI7 1052 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 SMIM22K7EJ46 135 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 KDM4AO75164 1064 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 PDCP20941 246 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 BAG6P46379 1132 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
GGA3-213ENST00000582486 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
GGA3-213ENST00000582486 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 MPNDQ8N594 471 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
GGA3-213ENST00000582486 SMARCC2Q8TAQ2 1214 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 LLPHQ9BRT6 129 aaKnown RBP13.18□□□□□ -0.3
GGA3-213ENST00000582486 CNNM2Q9H8M5 875 aa13.18□□□□□ -0.3
GGA3-213ENST00000582486 ANGEL1Q9UNK9 670 aaKnown RBP13.18□□□□□ -0.3
GGA3-213ENST00000582486 COL11A2P13942 1736 aaPredicted RBP13.18□□□□□ -0.3
GGA3-213ENST00000582486 LTBP1Q14766 1721 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 KRT23Q9C075 422 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 TOMM22Q9NS69 142 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
GGA3-213ENST00000582486 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 H0YIN7 160 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 SH2B2O14492 632 aaPredicted RBP13.17□□□□□ -0.3
GGA3-213ENST00000582486 PPFIA3O75145 1194 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 IGDCC4Q8TDY8 1250 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 CRNKL1Q9BZJ0 848 aaKnown RBP13.17□□□□□ -0.3
GGA3-213ENST00000582486 SENP2Q9HC62 589 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 ANAPC4Q9UJX5 808 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 HPS5Q9UPZ3 1129 aa13.17□□□□□ -0.3
GGA3-213ENST00000582486 PTPDC1A2A3K4 754 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
GGA3-213ENST00000582486 GIMAP6Q6P9H5 292 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 CTR9Q6PD62 1173 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 DPP8Q6V1X1 898 aaPredicted RBP13.16□□□□□ -0.3
GGA3-213ENST00000582486 FAM184AQ8NB25 1140 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 TMEM87BQ96K49 555 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 RNF41Q9H4P4 317 aaPredicted RBP13.16□□□□□ -0.3
GGA3-213ENST00000582486 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
GGA3-213ENST00000582486 CHD4Q14839 1912 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 USP17L21D6R901 530 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 IGSF3O75054 1194 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 ZC3H12CQ9C0D7 883 aaKnown RBP13.16□□□□□ -0.3
GGA3-213ENST00000582486 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
GGA3-213ENST00000582486 GDPD2Q9HCC8 539 aa13.16□□□□□ -0.3
GGA3-213ENST00000582486 BAZ2AQ9UIF9 1905 aaKnown RBP13.16□□□□□ -0.3
GGA3-213ENST00000582486 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 CHRNA5P30532 468 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 GSTO1P78417 241 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
GGA3-213ENST00000582486 KLHL40Q2TBA0 621 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 LY9Q9HBG7 655 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 ATP8A2Q9NTI2 1148 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 ATP6V1DQ9Y5K8 247 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 TCHHQ07283 1943 aa13.15□□□□□ -0.3
GGA3-213ENST00000582486 TULP1O00294 542 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms