RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 MCM5P33992 734 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 TDO2P48775 406 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 TRDNQ13061 729 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
MKS1-211ENST00000581761 CHST3Q7LGC8 479 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 ADGRA1Q86SQ6 560 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 TBC1D10CQ8IV04 446 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 ZNF526Q8TF50 670 aaPredicted RBP17.28■□□□□ 0.36
MKS1-211ENST00000581761 PODXL2Q9NZ53 605 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 JAG2Q9Y219 1238 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
MKS1-211ENST00000581761 LRRC37AA6NMS7 1700 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 PRC1O43663 620 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 PRELPP51888 382 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 APOBRQ0VD83 1088 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 SP8Q8IXZ3 490 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 TDRD7Q8NHU6 1098 aaKnown RBP17.27■□□□□ 0.36
MKS1-211ENST00000581761 WDR66Q8TBY9 1149 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 GTF3C6Q969F1 213 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.36
MKS1-211ENST00000581761 AGXT2Q9BYV1 514 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 NBPF3Q9H094 633 aa17.27■□□□□ 0.36
MKS1-211ENST00000581761 MAST2Q6P0Q8 1798 aa17.27■□□□□ 0.35
MKS1-211ENST00000581761 NFKBIEO00221 500 aa17.26■□□□□ 0.35
MKS1-211ENST00000581761 PFKFB2O60825 505 aa17.26■□□□□ 0.35
MKS1-211ENST00000581761 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
MKS1-211ENST00000581761 MECOMQ03112 1051 aa17.26■□□□□ 0.35
MKS1-211ENST00000581761 MCTP1Q6DN14 999 aa17.26■□□□□ 0.35
MKS1-211ENST00000581761 WDR19Q8NEZ3 1342 aa17.25■□□□□ 0.35
MKS1-211ENST00000581761 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
MKS1-211ENST00000581761 C6orf229H3BNL8 230 aa17.25■□□□□ 0.35
MKS1-211ENST00000581761 STX6O43752 255 aa17.25■□□□□ 0.35
MKS1-211ENST00000581761 TRAK2O60296 914 aa17.25■□□□□ 0.35
MKS1-211ENST00000581761 SYT1P21579 422 aa17.25■□□□□ 0.35
MKS1-211ENST00000581761 RASSF7Q02833 373 aa17.25■□□□□ 0.35
MKS1-211ENST00000581761 TMED8Q6PL24 325 aaPredicted RBP17.25■□□□□ 0.35
MKS1-211ENST00000581761 TBC1D16Q8TBP0 767 aa17.25■□□□□ 0.35
MKS1-211ENST00000581761 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
MKS1-211ENST00000581761 GPBP1L1Q9HC44 474 aaPredicted RBP17.25■□□□□ 0.35
MKS1-211ENST00000581761 NAP1L2Q9ULW6 460 aaPredicted RBP17.25■□□□□ 0.35
MKS1-211ENST00000581761 ATP6V0A2Q9Y487 856 aa17.25■□□□□ 0.35
MKS1-211ENST00000581761 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 DTNBO60941 627 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 IGSF3O75054 1194 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 PRDX5P30044 214 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 ANTXR2P58335 489 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 CTDSPL2Q05D32 466 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 DZIP1Q86YF9 867 aaKnown RBP17.24■□□□□ 0.35
MKS1-211ENST00000581761 FBXL16Q8N461 479 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 ZNF384Q8TF68 577 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 CD209Q9NNX6 404 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 POLLQ9UGP5 575 aa17.24■□□□□ 0.35
MKS1-211ENST00000581761 NEDD4P46934 1319 aa17.23■□□□□ 0.35
MKS1-211ENST00000581761 SNED1Q8TER0 1413 aa17.23■□□□□ 0.35
MKS1-211ENST00000581761 LDHBP07195 334 aaKnown RBP17.23■□□□□ 0.35
MKS1-211ENST00000581761 ZSCAN22P10073 491 aaPredicted RBP17.23■□□□□ 0.35
MKS1-211ENST00000581761 SCRN1Q12765 414 aa17.23■□□□□ 0.35
MKS1-211ENST00000581761 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
MKS1-211ENST00000581761 SDR42E1Q8WUS8 393 aa17.23■□□□□ 0.35
MKS1-211ENST00000581761 ZNF274Q96GC6 653 aaPredicted RBP17.23■□□□□ 0.35
MKS1-211ENST00000581761 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
MKS1-211ENST00000581761 B4E1Z4 1266 aa17.22■□□□□ 0.35
MKS1-211ENST00000581761 PDCP20941 246 aa17.22■□□□□ 0.35
MKS1-211ENST00000581761 C1QTNF8P60827 252 aa17.22■□□□□ 0.35
MKS1-211ENST00000581761 AKNAD1Q5T1N1 836 aa17.22■□□□□ 0.35
MKS1-211ENST00000581761 C9orf131Q5VYM1 1079 aa17.22■□□□□ 0.35
MKS1-211ENST00000581761 CYB5R4Q7L1T6 521 aa17.22■□□□□ 0.35
MKS1-211ENST00000581761 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
MKS1-211ENST00000581761 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
MKS1-211ENST00000581761 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
MKS1-211ENST00000581761 DUOX1Q9NRD9 1551 aa17.22■□□□□ 0.35
MKS1-211ENST00000581761 LTBP1Q14766 1721 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 CCDC88AQ3V6T2 1871 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 KLF18A0A0U1RQI7 1052 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 VPS37CA5D8V6 355 aaPredicted RBP17.21■□□□□ 0.35
MKS1-211ENST00000581761 JAK2O60674 1132 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 F13A1P00488 732 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 PDIA4P13667 645 aaKnown RBP17.21■□□□□ 0.35
MKS1-211ENST00000581761 IL1R1P14778 569 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
MKS1-211ENST00000581761 CCT2P78371 535 aaKnown RBP17.21■□□□□ 0.35
MKS1-211ENST00000581761 GSTO1P78417 241 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 PPARAQ07869 468 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 LARP1BQ659C4 914 aaKnown RBP17.21■□□□□ 0.35
MKS1-211ENST00000581761 MFSD6Q6ZSS7 791 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 STAG1Q8WVM7 1258 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 CRNKL1Q9BZJ0 848 aaKnown RBP17.21■□□□□ 0.35
MKS1-211ENST00000581761 KRT23Q9C075 422 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 RNF41Q9H4P4 317 aaPredicted RBP17.21■□□□□ 0.35
MKS1-211ENST00000581761 CNNM2Q9H8M5 875 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 AATFQ9NY61 560 aaKnown RBP eCLIP17.21■□□□□ 0.35
MKS1-211ENST00000581761 MTMR6Q9Y217 621 aa17.21■□□□□ 0.35
MKS1-211ENST00000581761 SH2B2O14492 632 aaPredicted RBP17.2■□□□□ 0.34
MKS1-211ENST00000581761 EVCP57679 992 aa17.2■□□□□ 0.34
MKS1-211ENST00000581761 GSE1Q14687 1217 aa17.2■□□□□ 0.34
MKS1-211ENST00000581761 MPNDQ8N594 471 aa17.2■□□□□ 0.34
MKS1-211ENST00000581761 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
MKS1-211ENST00000581761 GOLGA8BA8MQT2 603 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms