RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 LTBP3Q9NS15 1303 aa8.74□□□□□ -1.01
TVP23C-208ENST00000581273 CTAGE5O15320 804 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 KCNJ6P48051 423 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 TUBB4BP68371 445 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 NOGQ13253 232 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 CCDC93Q567U6 631 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 TMCO3Q6UWJ1 677 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 TDRD7Q8NHU6 1098 aaKnown RBP8.73□□□□□ -1.01
TVP23C-208ENST00000581273 RTF1Q92541 710 aaKnown RBP8.73□□□□□ -1.01
TVP23C-208ENST00000581273 TRIM5Q9C035 493 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 FAM107BQ9H098 131 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 KCNF1Q9H3M0 494 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 SAGE1Q9NXZ1 904 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 PSD3Q9NYI0 1048 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 FEZ2Q9UHY8 353 aaPredicted RBP8.73□□□□□ -1.01
TVP23C-208ENST00000581273 METRNQ9UJH8 293 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 SMC3Q9UQE7 1217 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 PAPPA2Q9BXP8 1791 aa8.73□□□□□ -1.01
TVP23C-208ENST00000581273 PRAMEF22A3QJZ6 481 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 GOLGA6L4A6NEF3 574 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 BTBD11A6QL63 1104 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 VGLL3A8MV65 326 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 GOLGA6L19H0YKK7 550 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 STX6O43752 255 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 VAMP4O75379 141 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 F13A1P00488 732 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 NPR1P16066 1061 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 PTGS1P23219 599 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 PLA2G5P39877 138 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 ZNF75DP51815 510 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 KRT85P78386 507 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 FOXK1P85037 733 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 FKBP4Q02790 459 aaKnown RBP eCLIP8.72□□□□□ -1.01
TVP23C-208ENST00000581273 PKN2Q16513 984 aaKnown RBP8.72□□□□□ -1.01
TVP23C-208ENST00000581273 PPP1R15BQ5SWA1 713 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 JAKMIP3Q5VZ66 844 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 ZSCAN25Q6NSZ9 544 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 SARM1Q6SZW1 724 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 CCDC186Q7Z3E2 898 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 MRFAP1L1Q96HT8 127 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 C16orf45Q96MC5 204 aaPredicted RBP8.72□□□□□ -1.01
TVP23C-208ENST00000581273 ESYT1Q9BSJ8 1104 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 SCAND2PQ9GZW5 306 aaPredicted RBP8.72□□□□□ -1.01
TVP23C-208ENST00000581273 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.72□□□□□ -1.01
TVP23C-208ENST00000581273 GJA3Q9Y6H8 435 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 PTPRCP08575 1304 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 LAMA3Q16787 3333 aa8.72□□□□□ -1.01
TVP23C-208ENST00000581273 CASQ1P31415 396 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 MMP14P50281 582 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 GTF2A1P52655 376 aaPredicted RBP8.71□□□□□ -1.02
TVP23C-208ENST00000581273 PLA2G4DQ86XP0 818 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 SPC24Q8NBT2 197 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 RGS22Q8NE09 1264 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 GOLGA5Q8TBA6 731 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 C7orf43Q8WVR3 580 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 MYCBPQ99417 103 aaPredicted RBP8.71□□□□□ -1.02
TVP23C-208ENST00000581273 ZNF408Q9H9D4 720 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 IMPACTQ9P2X3 320 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 HDAC9Q9UKV0 1011 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 LIMCH1Q9UPQ0 1083 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 NIP7Q9Y221 180 aaKnown RBP eCLIP8.71□□□□□ -1.02
TVP23C-208ENST00000581273 ZNF652Q9Y2D9 606 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 USP16Q9Y5T5 823 aa8.71□□□□□ -1.02
TVP23C-208ENST00000581273 A0A1B0GUL7 405 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 ERICH4A6NGS2 130 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 SOX1O00570 391 aaPredicted RBP8.7□□□□□ -1.02
TVP23C-208ENST00000581273 GADD45BO75293 160 aaPredicted RBP8.7□□□□□ -1.02
TVP23C-208ENST00000581273 H2AFXP16104 143 aaPredicted RBP8.7□□□□□ -1.02
TVP23C-208ENST00000581273 EN2P19622 333 aaPredicted RBP8.7□□□□□ -1.02
TVP23C-208ENST00000581273 IARSP41252 1262 aaKnown RBP8.7□□□□□ -1.02
TVP23C-208ENST00000581273 HNRNPH2P55795 449 aaKnown RBP8.7□□□□□ -1.02
TVP23C-208ENST00000581273 KIF23Q02241 960 aaPredicted RBP8.7□□□□□ -1.02
TVP23C-208ENST00000581273 TYRO3Q06418 890 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 NFE2L2Q16236 605 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 TPTE2Q6XPS3 522 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 NYAP1Q6ZVC0 841 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 RPAINQ86UA6 219 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 SIRT2Q8IXJ6 389 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 RTKN2Q8IZC4 609 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 C17orf53Q8N3J3 647 aaPredicted RBP8.7□□□□□ -1.02
TVP23C-208ENST00000581273 IQUBQ8NA54 791 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 CCDC150Q8NCX0 1101 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 HHIPL1Q96JK4 782 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 PHACTR3Q96KR7 559 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 TNMDQ9H2S6 317 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 DEF6Q9H4E7 631 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 CLIP2Q9UDT6 1046 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 LAMB4A4D0S4 1761 aa8.7□□□□□ -1.02
TVP23C-208ENST00000581273 HTTP42858 3142 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 IGSF3O75054 1194 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 USP8P40818 1118 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 RAD51AP2Q09MP3 1159 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 DSG2Q14126 1118 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 FOXD4L5Q5VV16 416 aaPredicted RBP8.69□□□□□ -1.02
TVP23C-208ENST00000581273 ICE2Q659A1 982 aa8.69□□□□□ -1.02
TVP23C-208ENST00000581273 LEKR1Q6ZMV7 388 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms