RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 NACAP1Q9BZK3 213 aa16.5■□□□□ 0.23
CDK5RAP3-219ENST00000580670 EPB41L4AQ9HCS5 686 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-219ENST00000580670 GAKO14976 1311 aa16.5■□□□□ 0.23
CDK5RAP3-219ENST00000580670 RPAP1Q9BWH6 1393 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-219ENST00000580670 GPR75-ASB3A0A0A6YYF3 556 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 CYP21A2P08686 494 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 VIL1P09327 827 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 PPP4CP60510 307 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 RSBN1LQ6PCB5 846 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 CERS3Q8IU89 383 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 SDR42E1Q8WUS8 393 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 NAPBQ9H115 298 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 DAGLAQ9Y4D2 1042 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 ZMYM6O95789 1325 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 TDO2P48775 406 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 PRELPP51888 382 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 CXCL9Q07325 125 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 TSGA10IPQ3SY00 556 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 MYO3BQ8WXR4 1341 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 TEKT1Q969V4 418 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 TAF6LQ9Y6J9 622 aa16.49■□□□□ 0.23
CDK5RAP3-219ENST00000580670 YBX3P16989 372 aaKnown RBP eCLIP16.48■□□□□ 0.23
CDK5RAP3-219ENST00000580670 HAND2P61296 217 aa16.48■□□□□ 0.23
CDK5RAP3-219ENST00000580670 ADCK5Q3MIX3 580 aa16.48■□□□□ 0.23
CDK5RAP3-219ENST00000580670 HHIPL2Q6UWX4 724 aa16.48■□□□□ 0.23
CDK5RAP3-219ENST00000580670 SH3RF3Q8TEJ3 882 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP3-219ENST00000580670 JAKMIP1Q96N16 626 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-219ENST00000580670 ZNF213O14771 459 aa16.47■□□□□ 0.23
CDK5RAP3-219ENST00000580670 PLCG2P16885 1265 aa16.47■□□□□ 0.23
CDK5RAP3-219ENST00000580670 CRKP46108 304 aa16.47■□□□□ 0.23
CDK5RAP3-219ENST00000580670 KRT32Q14532 448 aa16.47■□□□□ 0.23
CDK5RAP3-219ENST00000580670 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
CDK5RAP3-219ENST00000580670 CASTP20810 708 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-219ENST00000580670 HDLBPQ00341 1268 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-219ENST00000580670 GIMAP6Q6P9H5 292 aa16.46■□□□□ 0.23
CDK5RAP3-219ENST00000580670 MRIQ9BWK5 157 aa16.46■□□□□ 0.23
CDK5RAP3-219ENST00000580670 UPF3BQ9BZI7 483 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-219ENST00000580670 LMNB1P20700 586 aa16.46■□□□□ 0.22
CDK5RAP3-219ENST00000580670 PSMA5P28066 241 aa16.46■□□□□ 0.22
CDK5RAP3-219ENST00000580670 USP5P45974 858 aa16.46■□□□□ 0.22
CDK5RAP3-219ENST00000580670 NEK4P51957 841 aa16.46■□□□□ 0.22
CDK5RAP3-219ENST00000580670 RBM5P52756 815 aaKnown RBP eCLIP16.46■□□□□ 0.229e-32■■■■□ 20.3
CDK5RAP3-219ENST00000580670 TNIP1Q15025 636 aa16.46■□□□□ 0.22
CDK5RAP3-219ENST00000580670 GMLQ99445 158 aa16.46■□□□□ 0.22
CDK5RAP3-219ENST00000580670 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.22
CDK5RAP3-219ENST00000580670 ATP8A2Q9NTI2 1148 aa16.46■□□□□ 0.22
CDK5RAP3-219ENST00000580670 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.22
CDK5RAP3-219ENST00000580670 FZD9O00144 591 aa16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 RHBDL3P58872 404 aa16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 TEX11Q8IYF3 940 aa16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 AGBL3Q8NEM8 1001 aa16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 TGFBRAP1Q8WUH2 860 aa16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 ZDHHC15Q96MV8 337 aa16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 DCP1AQ9NPI6 582 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 SERPINA10Q9UK55 444 aa16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 ADAMTSL1Q8N6G6 1762 aa16.45■□□□□ 0.22
CDK5RAP3-219ENST00000580670 E7EWF7 191 aa16.44■□□□□ 0.22
CDK5RAP3-219ENST00000580670 ST18O60284 1047 aa16.44■□□□□ 0.22
CDK5RAP3-219ENST00000580670 BECN1Q14457 450 aa16.44■□□□□ 0.22
CDK5RAP3-219ENST00000580670 APOBEC3HQ6NTF7 200 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-219ENST00000580670 STOX1Q6ZVD7 989 aa16.44■□□□□ 0.22
CDK5RAP3-219ENST00000580670 ZSWIM6Q9HCJ5 1215 aa16.44■□□□□ 0.22
CDK5RAP3-219ENST00000580670 LAMA4Q16363 1823 aa16.44■□□□□ 0.22
CDK5RAP3-219ENST00000580670 CPA1P15085 419 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 SNX21Q969T3 373 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 NEK1Q96PY6 1258 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 HDAC9Q9UKV0 1011 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 CYP46A1Q9Y6A2 500 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 MINDY4BA8MYZ0 360 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 CD2BP2O95400 341 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 BLOC1S2Q6QNY1 142 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 RUFY3Q7L099 469 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 TBC1D10CQ8IV04 446 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 OGFOD1Q8N543 542 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 NBPF3Q9H094 633 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 USP40Q9NVE5 1235 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 PCDHAC2Q9Y5I4 1007 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 SRCAPQ6ZRS2 3230 aa16.43■□□□□ 0.22
CDK5RAP3-219ENST00000580670 USP17L12C9JPN9 530 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 USP17L21D6R901 530 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 CTDSPL2Q05D32 466 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 PPARAQ07869 468 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 GPR162Q16538 588 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 CFAP100Q494V2 611 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 CDC42EP5Q6NZY7 148 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 MAPKAPK5Q8IW41 473 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 MCM9Q9NXL9 1143 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 MKRN1Q9UHC7 482 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 SBF1O95248 1867 aa16.42■□□□□ 0.22
CDK5RAP3-219ENST00000580670 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-219ENST00000580670 CYP2D7A0A087X1C5 515 aa16.41■□□□□ 0.22
CDK5RAP3-219ENST00000580670 IL27Q8NEV9 243 aa16.41■□□□□ 0.22
CDK5RAP3-219ENST00000580670 PDRG1Q9NUG6 133 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms