RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
ATP2A3-215ENST00000576957 ZCCHC17Q9NP64 241 aaKnown RBP16.46■□□□□ 0.23
ATP2A3-215ENST00000576957 RPAP1Q9BWH6 1393 aaPredicted RBP16.46■□□□□ 0.23
ATP2A3-215ENST00000576957 HTTP42858 3142 aa16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 ARMC5Q96C12 935 aa16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 OTUD5Q96G74 571 aa16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 SMC4Q9NTJ3 1288 aa16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 HDAC5Q9UQL6 1122 aa16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 SNCAIPQ9Y6H5 919 aa16.45■□□□□ 0.22
ATP2A3-215ENST00000576957 CIAO1O76071 339 aa16.44■□□□□ 0.22
ATP2A3-215ENST00000576957 UBTFL1P0CB47 393 aaPredicted RBP16.44■□□□□ 0.22
ATP2A3-215ENST00000576957 CETPP11597 493 aa16.44■□□□□ 0.22
ATP2A3-215ENST00000576957 TRMT2AQ8IZ69 625 aaKnown RBP16.44■□□□□ 0.22
ATP2A3-215ENST00000576957 PCDH10Q9P2E7 1040 aa16.44■□□□□ 0.22
ATP2A3-215ENST00000576957 ZBTB47Q9UFB7 747 aaPredicted RBP16.44■□□□□ 0.22
ATP2A3-215ENST00000576957 ZBTB22O15209 634 aa16.43■□□□□ 0.22
ATP2A3-215ENST00000576957 SNAPC2Q13487 334 aa16.43■□□□□ 0.22
ATP2A3-215ENST00000576957 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
ATP2A3-215ENST00000576957 FAM151AQ8WW52 585 aa16.43■□□□□ 0.22
ATP2A3-215ENST00000576957 ZNF341Q9BYN7 854 aa16.43■□□□□ 0.22
ATP2A3-215ENST00000576957 GNL3LQ9NVN8 582 aaKnown RBP16.43■□□□□ 0.22
ATP2A3-215ENST00000576957 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
ATP2A3-215ENST00000576957 MYH13Q9UKX3 1938 aa16.43■□□□□ 0.22
ATP2A3-215ENST00000576957 RBBP6Q7Z6E9 1792 aaKnown RBP16.42■□□□□ 0.22
ATP2A3-215ENST00000576957 PPATQ06203 517 aa16.42■□□□□ 0.22
ATP2A3-215ENST00000576957 PPIL2Q13356 520 aa16.42■□□□□ 0.22
ATP2A3-215ENST00000576957 ZKSCAN4Q969J2 545 aaPredicted RBP16.42■□□□□ 0.22
ATP2A3-215ENST00000576957 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
ATP2A3-215ENST00000576957 SALL1Q9NSC2 1324 aa16.42■□□□□ 0.22
ATP2A3-215ENST00000576957 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 IRF6O14896 467 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 SEMA3EO15041 775 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 TLR2O60603 784 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 IL15P40933 162 aaPredicted RBP16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 CAP1Q01518 475 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 ATP2B3Q16720 1220 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 NBPF11Q86T75 865 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 EXOC6Q8TAG9 804 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 API5Q9BZZ5 524 aaKnown RBP16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 BCL11AQ9H165 835 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 DENND2AQ9ULE3 1009 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 DAGLAQ9Y4D2 1042 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 CENPFP49454 3210 aa16.41■□□□□ 0.22
ATP2A3-215ENST00000576957 BTBD19C9JJ37 291 aa16.4■□□□□ 0.22
ATP2A3-215ENST00000576957 GNRH1P01148 92 aa16.4■□□□□ 0.22
ATP2A3-215ENST00000576957 LDHBP07195 334 aaKnown RBP16.4■□□□□ 0.22
ATP2A3-215ENST00000576957 CDC42EP5Q6NZY7 148 aa16.4■□□□□ 0.22
ATP2A3-215ENST00000576957 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
ATP2A3-215ENST00000576957 SIL1Q9H173 461 aa16.4■□□□□ 0.22
ATP2A3-215ENST00000576957 ZNF112Q9UJU3 913 aa16.4■□□□□ 0.22
ATP2A3-215ENST00000576957 NOB1Q9ULX3 412 aaKnown RBP16.4■□□□□ 0.22
ATP2A3-215ENST00000576957 PRDX5P30044 214 aa16.39■□□□□ 0.21
ATP2A3-215ENST00000576957 KIF22Q14807 665 aa16.39■□□□□ 0.21
ATP2A3-215ENST00000576957 MIGA2Q7L4E1 593 aa16.39■□□□□ 0.21
ATP2A3-215ENST00000576957 ZNF333Q96JL9 665 aa16.39■□□□□ 0.21
ATP2A3-215ENST00000576957 TMEM106CQ9BVX2 250 aa16.39■□□□□ 0.21
ATP2A3-215ENST00000576957 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
ATP2A3-215ENST00000576957 DIXDC1Q155Q3 683 aa16.38■□□□□ 0.21
ATP2A3-215ENST00000576957 SLC9C1Q4G0N8 1177 aa16.38■□□□□ 0.21
ATP2A3-215ENST00000576957 ZGPATQ8N5A5 531 aaKnown RBP16.38■□□□□ 0.21
ATP2A3-215ENST00000576957 LRRFIP2Q9Y608 721 aaKnown RBP16.38■□□□□ 0.21
ATP2A3-215ENST00000576957 PTCH2Q9Y6C5 1203 aa16.38■□□□□ 0.21
ATP2A3-215ENST00000576957 MKI67P46013 3256 aaKnown RBP16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 INPP5BP32019 993 aa16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 PRMT2P55345 433 aa16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 TCP10Q12799 353 aa16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 NOL9Q5SY16 702 aaKnown RBP16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 ANKRD23Q86SG2 305 aa16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 DDRGK1Q96HY6 314 aa16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 USP40Q9NVE5 1235 aa16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 KCNH4Q9UQ05 1017 aa16.37■□□□□ 0.21
ATP2A3-215ENST00000576957 EN2P19622 333 aaPredicted RBP16.36■□□□□ 0.21
ATP2A3-215ENST00000576957 PHKA1P46020 1223 aa16.36■□□□□ 0.21
ATP2A3-215ENST00000576957 NFIAQ12857 509 aa16.36■□□□□ 0.21
ATP2A3-215ENST00000576957 ARHGAP45Q92619 1136 aa16.36■□□□□ 0.21
ATP2A3-215ENST00000576957 IDI2Q9BXS1 227 aa16.36■□□□□ 0.21
ATP2A3-215ENST00000576957 FAM198AQ9UFP1 575 aa16.36■□□□□ 0.21
ATP2A3-215ENST00000576957 PDS5AQ29RF7 1337 aaKnown RBP16.36■□□□□ 0.21
ATP2A3-215ENST00000576957 BRCA2P51587 3418 aa16.35■□□□□ 0.21
ATP2A3-215ENST00000576957 AK9Q5TCS8 1911 aa16.35■□□□□ 0.21
ATP2A3-215ENST00000576957 CCDC102BQ68D86 513 aa16.35■□□□□ 0.21
ATP2A3-215ENST00000576957 C17orf99Q6UX52 265 aa16.35■□□□□ 0.21
ATP2A3-215ENST00000576957 SLF2Q8IX21 1173 aa16.35■□□□□ 0.21
ATP2A3-215ENST00000576957 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
ATP2A3-215ENST00000576957 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
ATP2A3-215ENST00000576957 CXCL11O14625 94 aa16.34■□□□□ 0.21
ATP2A3-215ENST00000576957 ENTPD3O75355 529 aa16.34■□□□□ 0.21
ATP2A3-215ENST00000576957 GNAI3P08754 354 aa16.34■□□□□ 0.21
ATP2A3-215ENST00000576957 PDE4AP27815 886 aa16.34■□□□□ 0.21
ATP2A3-215ENST00000576957 RARSP54136 660 aaKnown RBP16.34■□□□□ 0.21
ATP2A3-215ENST00000576957 FAM163AQ96GL9 167 aaPredicted RBP16.34■□□□□ 0.21
ATP2A3-215ENST00000576957 MEIS3Q99687 375 aa16.34■□□□□ 0.21
ATP2A3-215ENST00000576957 BACH2Q9BYV9 841 aa16.34■□□□□ 0.21
ATP2A3-215ENST00000576957 AKAP2Q9Y2D5 859 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms