RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 WBP1LQ9NX94 342 aa18.67■□□□□ 0.58
SMG6-220ENST00000576218 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
SMG6-220ENST00000576218 DBNLQ9UJU6 430 aaKnown RBP18.67■□□□□ 0.58
SMG6-220ENST00000576218 FZD1Q9UP38 647 aa18.67■□□□□ 0.58
SMG6-220ENST00000576218 FOXN1O15353 648 aa18.66■□□□□ 0.58
SMG6-220ENST00000576218 LDHCP07864 332 aa18.66■□□□□ 0.58
SMG6-220ENST00000576218 CTCFP49711 727 aaPredicted RBP18.66■□□□□ 0.58
SMG6-220ENST00000576218 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
SMG6-220ENST00000576218 RASAL3Q86YV0 1011 aa18.66■□□□□ 0.58
SMG6-220ENST00000576218 THSD7BQ9C0I4 1608 aa18.65■□□□□ 0.58
SMG6-220ENST00000576218 BTDP43251 543 aa18.65■□□□□ 0.58
SMG6-220ENST00000576218 MECOMQ03112 1051 aa18.65■□□□□ 0.58
SMG6-220ENST00000576218 TCP10Q12799 353 aa18.65■□□□□ 0.58
SMG6-220ENST00000576218 MKRN3Q13064 507 aaKnown RBP18.65■□□□□ 0.58
SMG6-220ENST00000576218 CDC42EP5Q6NZY7 148 aa18.65■□□□□ 0.58
SMG6-220ENST00000576218 SIRT2Q8IXJ6 389 aa18.65■□□□□ 0.58
SMG6-220ENST00000576218 KIF23Q02241 960 aaPredicted RBP18.64■□□□□ 0.57
SMG6-220ENST00000576218 FKBP1CQ5VVH2 108 aa18.64■□□□□ 0.57
SMG6-220ENST00000576218 FAM83AQ86UY5 434 aa18.64■□□□□ 0.57
SMG6-220ENST00000576218 SLC10A4Q96EP9 437 aa18.64■□□□□ 0.57
SMG6-220ENST00000576218 MROH7-TTC4A0A0A0MT08 1334 aa18.64■□□□□ 0.57
SMG6-220ENST00000576218 FAM155AB1AL88 458 aaPredicted RBP18.63■□□□□ 0.57
SMG6-220ENST00000576218 CA12O43570 354 aa18.63■□□□□ 0.57
SMG6-220ENST00000576218 NAA16Q6N069 864 aaPredicted RBP18.63■□□□□ 0.57
SMG6-220ENST00000576218 PCNTO95613 3336 aa18.63■□□□□ 0.57
SMG6-220ENST00000576218 SSC5DA1L4H1 1573 aa18.63■□□□□ 0.57
SMG6-220ENST00000576218 ZAP70P43403 619 aa18.62■□□□□ 0.57
SMG6-220ENST00000576218 PICALMQ13492 652 aa18.62■□□□□ 0.57
SMG6-220ENST00000576218 DCAF15Q66K64 600 aa18.62■□□□□ 0.57
SMG6-220ENST00000576218 ZSCAN29Q8IWY8 852 aaPredicted RBP18.62■□□□□ 0.57
SMG6-220ENST00000576218 ANKRD13AQ8IZ07 590 aa18.62■□□□□ 0.57
SMG6-220ENST00000576218 ZNF512BQ96KM6 892 aaPredicted RBP18.62■□□□□ 0.57
SMG6-220ENST00000576218 LRRCC1Q9C099 1032 aa18.62■□□□□ 0.57
SMG6-220ENST00000576218 GAKO14976 1311 aa18.62■□□□□ 0.57
SMG6-220ENST00000576218 MYH2Q9UKX2 1941 aa18.62■□□□□ 0.57
SMG6-220ENST00000576218 IDH1O75874 414 aaKnown RBP18.61■□□□□ 0.57
SMG6-220ENST00000576218 MAP3K11Q16584 847 aa18.61■□□□□ 0.57
SMG6-220ENST00000576218 CDAN1Q8IWY9 1227 aa18.61■□□□□ 0.57
SMG6-220ENST00000576218 REM2Q8IYK8 340 aaPredicted RBP18.61■□□□□ 0.57
SMG6-220ENST00000576218 FAM151AQ8WW52 585 aa18.61■□□□□ 0.57
SMG6-220ENST00000576218 NSUN4Q96CB9 384 aaKnown RBP18.61■□□□□ 0.57
SMG6-220ENST00000576218 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
SMG6-220ENST00000576218 CRBNQ96SW2 442 aa18.61■□□□□ 0.57
SMG6-220ENST00000576218 ZIC5Q96T25 663 aa18.61■□□□□ 0.57
SMG6-220ENST00000576218 CSADQ9Y600 493 aa18.61■□□□□ 0.57
SMG6-220ENST00000576218 RPAP1Q9BWH6 1393 aaPredicted RBP18.6■□□□□ 0.57
SMG6-220ENST00000576218 USP2O75604 605 aaPredicted RBP18.6■□□□□ 0.57
SMG6-220ENST00000576218 BAG3O95817 575 aa18.6■□□□□ 0.57
SMG6-220ENST00000576218 CYP2E1P05181 493 aaPredicted RBP18.6■□□□□ 0.57
SMG6-220ENST00000576218 LBX1P52954 281 aa18.6■□□□□ 0.57
SMG6-220ENST00000576218 SREBF2Q12772 1141 aa18.6■□□□□ 0.57
SMG6-220ENST00000576218 NFIAQ12857 509 aa18.6■□□□□ 0.57
SMG6-220ENST00000576218 LDLRAD1Q5T700 205 aa18.6■□□□□ 0.57
SMG6-220ENST00000576218 ZBTB47Q9UFB7 747 aaPredicted RBP18.6■□□□□ 0.57
SMG6-220ENST00000576218 TSKSQ9UJT2 592 aa18.6■□□□□ 0.57
SMG6-220ENST00000576218 RGS3P49796 1198 aa18.59■□□□□ 0.57
SMG6-220ENST00000576218 FAM163AQ96GL9 167 aaPredicted RBP18.59■□□□□ 0.57
SMG6-220ENST00000576218 CLMNQ96JQ2 1002 aa18.59■□□□□ 0.57
SMG6-220ENST00000576218 DNAJC2Q99543 621 aaKnown RBP18.59■□□□□ 0.57
SMG6-220ENST00000576218 ELP3Q9H9T3 547 aa18.59■□□□□ 0.57
SMG6-220ENST00000576218 GPR75-ASB3A0A0A6YYF3 556 aa18.58■□□□□ 0.56
SMG6-220ENST00000576218 UNCXA6NJT0 531 aa18.58■□□□□ 0.56
SMG6-220ENST00000576218 HSPA8P11142 646 aaKnown RBP18.58■□□□□ 0.56
SMG6-220ENST00000576218 MAP3K12Q12852 859 aa18.58■□□□□ 0.56
SMG6-220ENST00000576218 TTF1Q15361 905 aaPredicted RBP18.58■□□□□ 0.56
SMG6-220ENST00000576218 MIGA2Q7L4E1 593 aa18.58■□□□□ 0.56
SMG6-220ENST00000576218 WRNIP1Q96S55 665 aa18.58■□□□□ 0.56
SMG6-220ENST00000576218 ZNF341Q9BYN7 854 aa18.58■□□□□ 0.56
SMG6-220ENST00000576218 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.56
SMG6-220ENST00000576218 NDUFB9Q9Y6M9 179 aa18.58■□□□□ 0.56
SMG6-220ENST00000576218 AK9Q5TCS8 1911 aa18.58■□□□□ 0.56
SMG6-220ENST00000576218 MAST2Q6P0Q8 1798 aa18.58■□□□□ 0.56
SMG6-220ENST00000576218 ENTPD3O75355 529 aa18.57■□□□□ 0.56
SMG6-220ENST00000576218 PLCG2P16885 1265 aa18.57■□□□□ 0.56
SMG6-220ENST00000576218 MAP3K9P80192 1104 aa18.57■□□□□ 0.56
SMG6-220ENST00000576218 SPRYD7Q5W111 196 aa18.57■□□□□ 0.56
SMG6-220ENST00000576218 TEX11Q8IYF3 940 aa18.57■□□□□ 0.56
SMG6-220ENST00000576218 GPATCH3Q96I76 525 aa18.57■□□□□ 0.56
SMG6-220ENST00000576218 CSRNP1Q96S65 589 aa18.57■□□□□ 0.56
SMG6-220ENST00000576218 IDI2Q9BXS1 227 aa18.57■□□□□ 0.56
SMG6-220ENST00000576218 AATFQ9NY61 560 aaKnown RBP eCLIP18.57■□□□□ 0.56
SMG6-220ENST00000576218 FAM198AQ9UFP1 575 aa18.57■□□□□ 0.56
SMG6-220ENST00000576218 TRPA1O75762 1119 aa18.56■□□□□ 0.56
SMG6-220ENST00000576218 MAP4K4O95819 1239 aaPredicted RBP18.56■□□□□ 0.56
SMG6-220ENST00000576218 ZBTB48P10074 688 aaPredicted RBP18.56■□□□□ 0.56
SMG6-220ENST00000576218 CYP7A1P22680 504 aa18.56■□□□□ 0.56
SMG6-220ENST00000576218 COL13A1Q5TAT6 717 aaPredicted RBP18.56■□□□□ 0.56
SMG6-220ENST00000576218 WNK4Q96J92 1243 aa18.56■□□□□ 0.56
SMG6-220ENST00000576218 PRDM10Q9NQV6 1147 aa18.56■□□□□ 0.56
SMG6-220ENST00000576218 MANSC4A6NHS7 340 aaPredicted RBP18.55■□□□□ 0.56
SMG6-220ENST00000576218 SMARCA5O60264 1052 aaPredicted RBP18.55■□□□□ 0.56
SMG6-220ENST00000576218 IGSF3O75054 1194 aa18.55■□□□□ 0.56
SMG6-220ENST00000576218 VGLL4Q14135 290 aa18.55■□□□□ 0.56
SMG6-220ENST00000576218 TNS4Q8IZW8 715 aa18.55■□□□□ 0.56
SMG6-220ENST00000576218 MAGEB6Q8N7X4 407 aa18.55■□□□□ 0.56
SMG6-220ENST00000576218 ZNF384Q8TF68 577 aa18.55■□□□□ 0.56
SMG6-220ENST00000576218 GOLIM4O00461 696 aa18.54■□□□□ 0.56
SMG6-220ENST00000576218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMG6-220ENST00000576218 OPTNQ96CV9 577 aa18.54■□□□□ 0.56
SMG6-220ENST00000576218 DCTPP1Q9H773 170 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms