RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SALL1Q9NSC2 1324 aa17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 PNMA6EA0A0J9YXQ4 647 aa17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 ALDH1A1P00352 501 aa17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 TFCP2Q12800 502 aa17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 RASGRF1Q13972 1273 aa17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 ZFPM1Q8IX07 1006 aa17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 CLUAP1Q96AJ1 413 aa17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 FAM198AQ9UFP1 575 aa17.23■□□□□ 0.35
GTF3C1-211ENST00000569653 MYO5AQ9Y4I1 1855 aaKnown RBP17.22■□□□□ 0.35
GTF3C1-211ENST00000569653 SPDYE5A6NIY4 337 aa17.22■□□□□ 0.35
GTF3C1-211ENST00000569653 FBXO46Q6PJ61 603 aaPredicted RBP17.22■□□□□ 0.35
GTF3C1-211ENST00000569653 ATF7IPQ6VMQ6 1270 aa17.22■□□□□ 0.35
GTF3C1-211ENST00000569653 MIGA2Q7L4E1 593 aa17.22■□□□□ 0.35
GTF3C1-211ENST00000569653 FAM43AQ8N2R8 423 aa17.22■□□□□ 0.35
GTF3C1-211ENST00000569653 ZNF384Q8TF68 577 aa17.22■□□□□ 0.35
GTF3C1-211ENST00000569653 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
GTF3C1-211ENST00000569653 ATRNL1Q5VV63 1379 aa17.22■□□□□ 0.35
GTF3C1-211ENST00000569653 ZBTB22O15209 634 aa17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 INPP5BP32019 993 aa17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 TCP10Q12799 353 aa17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 PKN2Q16513 984 aaKnown RBP17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 OTOP1Q7RTM1 612 aa17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 CD99L2Q8TCZ2 262 aa17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 WRNIP1Q96S55 665 aa17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 KIAA0100Q14667 2235 aaKnown RBP17.21■□□□□ 0.35
GTF3C1-211ENST00000569653 CCL15-CCL14A0A0B4J2E2 113 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 LDHBP07195 334 aaKnown RBP17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 GNAI3P08754 354 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 CCL15Q16663 113 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 PI16Q6UXB8 463 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 TMEM57Q8N5G2 664 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 XAGE2Q96GT9 111 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 TMOD2Q9NZR1 351 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 DENND2AQ9ULE3 1009 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 RBBP6Q7Z6E9 1792 aaKnown RBP17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 GAKO14976 1311 aa17.2■□□□□ 0.34
GTF3C1-211ENST00000569653 PTPRFP10586 1907 aa17.19■□□□□ 0.34
GTF3C1-211ENST00000569653 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
GTF3C1-211ENST00000569653 IRF6O14896 467 aa17.19■□□□□ 0.34
GTF3C1-211ENST00000569653 SEMA3EO15041 775 aa17.19■□□□□ 0.34
GTF3C1-211ENST00000569653 SH3BP5LQ7L8J4 393 aa17.19■□□□□ 0.34
GTF3C1-211ENST00000569653 FAM151AQ8WW52 585 aa17.19■□□□□ 0.34
GTF3C1-211ENST00000569653 TRIM17Q9Y577 477 aa17.19■□□□□ 0.34
GTF3C1-211ENST00000569653 CSADQ9Y600 493 aa17.19■□□□□ 0.34
GTF3C1-211ENST00000569653 RLBP1P12271 317 aa17.18■□□□□ 0.34
GTF3C1-211ENST00000569653 USP40Q9NVE5 1235 aa17.18■□□□□ 0.34
GTF3C1-211ENST00000569653 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-211ENST00000569653 ZNF112Q9UJU3 913 aa17.18■□□□□ 0.34
GTF3C1-211ENST00000569653 CDK5RAP2Q96SN8 1893 aa17.18■□□□□ 0.34
GTF3C1-211ENST00000569653 PDS5AQ29RF7 1337 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-211ENST00000569653 GTF2A2P52657 109 aa17.17■□□□□ 0.34
GTF3C1-211ENST00000569653 HNRNPUQ00839 825 aaKnown RBP eCLIP17.17■□□□□ 0.34
GTF3C1-211ENST00000569653 MOGSQ13724 837 aa17.17■□□□□ 0.34
GTF3C1-211ENST00000569653 ERO1BQ86YB8 467 aa17.17■□□□□ 0.34
GTF3C1-211ENST00000569653 ZNF341Q9BYN7 854 aa17.17■□□□□ 0.34
GTF3C1-211ENST00000569653 DDX4Q9NQI0 724 aaKnown RBP17.17■□□□□ 0.34
GTF3C1-211ENST00000569653 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
GTF3C1-211ENST00000569653 DOCK1Q14185 1865 aa17.16■□□□□ 0.34
GTF3C1-211ENST00000569653 BTBD19C9JJ37 291 aa17.16■□□□□ 0.34
GTF3C1-211ENST00000569653 IPO8O15397 1037 aaKnown RBP17.16■□□□□ 0.34
GTF3C1-211ENST00000569653 WDHD1O75717 1129 aaPredicted RBP17.16■□□□□ 0.34
GTF3C1-211ENST00000569653 GNAI2P04899 355 aa17.16■□□□□ 0.34
GTF3C1-211ENST00000569653 RGS3P49796 1198 aa17.16■□□□□ 0.34
GTF3C1-211ENST00000569653 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
GTF3C1-211ENST00000569653 HMG20BQ9P0W2 317 aa17.16■□□□□ 0.34
GTF3C1-211ENST00000569653 SIPA1L1O43166 1804 aa17.16■□□□□ 0.34
GTF3C1-211ENST00000569653 SP3Q02447 781 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 PPIL2Q13356 520 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 POLA2Q14181 598 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 TAF1CQ15572 869 aaPredicted RBP17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 ZKSCAN2Q63HK3 967 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 DCAF15Q66K64 600 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 OTUD7BQ6GQQ9 843 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 ARHGAP39Q9C0H5 1083 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 ABCF2Q9UG63 623 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 PTPN22Q9Y2R2 807 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
GTF3C1-211ENST00000569653 DDTLA6NHG4 134 aaPredicted RBP17.14■□□□□ 0.33
GTF3C1-211ENST00000569653 PHF20L1A8MW92 1017 aa17.14■□□□□ 0.33
GTF3C1-211ENST00000569653 RHBDL3P58872 404 aa17.14■□□□□ 0.33
GTF3C1-211ENST00000569653 MECOMQ03112 1051 aa17.14■□□□□ 0.33
GTF3C1-211ENST00000569653 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.14■□□□□ 0.33
GTF3C1-211ENST00000569653 FAM163AQ96GL9 167 aaPredicted RBP17.14■□□□□ 0.33
GTF3C1-211ENST00000569653 ERO1AQ96HE7 468 aa17.14■□□□□ 0.33
GTF3C1-211ENST00000569653 IDI2Q9BXS1 227 aa17.14■□□□□ 0.33
GTF3C1-211ENST00000569653 ATAD5Q96QE3 1844 aa17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 POTEFA5A3E0 1075 aa17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 MCAMP43121 646 aa17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 BTDP43251 543 aa17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 MVPQ14764 893 aaKnown RBP17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 NOL9Q5SY16 702 aaKnown RBP17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 DZIP1Q86YF9 867 aaKnown RBP17.13■□□□□ 0.33
GTF3C1-211ENST00000569653 NEUROD6Q96NK8 337 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 337.9 ms