RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 ERO1BQ86YB8 467 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 CDAN1Q8IWY9 1227 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 OPTNQ96CV9 577 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 PTPN18Q99952 460 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 IDI2Q9BXS1 227 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 R3HDMLQ9H3Y0 253 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 CSADQ9Y600 493 aa18.8■□□□□ 0.6
CMTM3-212ENST00000566121 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
CMTM3-212ENST00000566121 PRDX5P30044 214 aa18.79■□□□□ 0.6
CMTM3-212ENST00000566121 TIMM10P62072 90 aa18.79■□□□□ 0.6
CMTM3-212ENST00000566121 DIEXFQ68CQ4 756 aaKnown RBP18.79■□□□□ 0.6
CMTM3-212ENST00000566121 CDC42EP5Q6NZY7 148 aa18.79■□□□□ 0.6
CMTM3-212ENST00000566121 HTTP42858 3142 aa18.78■□□□□ 0.6
CMTM3-212ENST00000566121 A0A1B0GUL7 405 aa18.78■□□□□ 0.6
CMTM3-212ENST00000566121 POLA2Q14181 598 aa18.78■□□□□ 0.6
CMTM3-212ENST00000566121 MIER1Q8N108 512 aa18.78■□□□□ 0.6
CMTM3-212ENST00000566121 XAGE2Q96GT9 111 aa18.78■□□□□ 0.6
CMTM3-212ENST00000566121 ZNF341Q9BYN7 854 aa18.78■□□□□ 0.6
CMTM3-212ENST00000566121 ELP3Q9H9T3 547 aa18.78■□□□□ 0.6
CMTM3-212ENST00000566121 HPS5Q9UPZ3 1129 aa18.78■□□□□ 0.6
CMTM3-212ENST00000566121 TNRC18O15417 2968 aaPredicted RBP18.77■□□□□ 0.6
CMTM3-212ENST00000566121 ENTPD3O75355 529 aa18.77■□□□□ 0.6
CMTM3-212ENST00000566121 PPATQ06203 517 aa18.77■□□□□ 0.6
CMTM3-212ENST00000566121 TFCP2Q12800 502 aa18.77■□□□□ 0.6
CMTM3-212ENST00000566121 RASGRF1Q13972 1273 aa18.77■□□□□ 0.6
CMTM3-212ENST00000566121 SSH3Q8TE77 659 aa18.77■□□□□ 0.6
CMTM3-212ENST00000566121 SNCAIPQ9Y6H5 919 aa18.77■□□□□ 0.6
CMTM3-212ENST00000566121 ZBED9Q6R2W3 1325 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 PDE4DIPQ5VU43 2346 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 ADORA1P30542 326 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 CACNB3P54284 484 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 G3BP1Q13283 466 aaKnown RBP eCLIP18.76■□□□□ 0.59
CMTM3-212ENST00000566121 PPIL2Q13356 520 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 DIXDC1Q155Q3 683 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 NOL9Q5SY16 702 aaKnown RBP18.76■□□□□ 0.59
CMTM3-212ENST00000566121 BRI3BPQ8WY22 251 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
CMTM3-212ENST00000566121 ERO1AQ96HE7 468 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 FAM198AQ9UFP1 575 aa18.76■□□□□ 0.59
CMTM3-212ENST00000566121 CETPP11597 493 aa18.75■□□□□ 0.59
CMTM3-212ENST00000566121 ARID4AP29374 1257 aaPredicted RBP18.75■□□□□ 0.59
CMTM3-212ENST00000566121 ATP8B2P98198 1209 aa18.75■□□□□ 0.59
CMTM3-212ENST00000566121 HNRNPUQ00839 825 aaKnown RBP eCLIP18.75■□□□□ 0.59
CMTM3-212ENST00000566121 CRHR2Q13324 411 aa18.75■□□□□ 0.59
CMTM3-212ENST00000566121 TMEM57Q8N5G2 664 aa18.75■□□□□ 0.59
CMTM3-212ENST00000566121 WRNIP1Q96S55 665 aa18.75■□□□□ 0.59
CMTM3-212ENST00000566121 USP40Q9NVE5 1235 aa18.75■□□□□ 0.59
CMTM3-212ENST00000566121 NOP58Q9Y2X3 529 aaKnown RBP18.75■□□□□ 0.59
CMTM3-212ENST00000566121 OTOFQ9HC10 1997 aa18.74■□□□□ 0.59
CMTM3-212ENST00000566121 RFX7Q2KHR2 1363 aa18.74■□□□□ 0.59
CMTM3-212ENST00000566121 GPR75-ASB3A0A0A6YYF3 556 aa18.74■□□□□ 0.59
CMTM3-212ENST00000566121 PNMA6EA0A0J9YXQ4 647 aa18.74■□□□□ 0.59
CMTM3-212ENST00000566121 ZBTB7BO15156 539 aaPredicted RBP18.74■□□□□ 0.59
CMTM3-212ENST00000566121 SNAPC2Q13487 334 aa18.74■□□□□ 0.59
CMTM3-212ENST00000566121 ARHGEF6Q15052 776 aa18.74■□□□□ 0.59
CMTM3-212ENST00000566121 ZNF512BQ96KM6 892 aaPredicted RBP18.74■□□□□ 0.59
CMTM3-212ENST00000566121 KCNH4Q9UQ05 1017 aa18.74■□□□□ 0.59
CMTM3-212ENST00000566121 CCL15-CCL14A0A0B4J2E2 113 aa18.73■□□□□ 0.59
CMTM3-212ENST00000566121 WDHD1O75717 1129 aaPredicted RBP18.73■□□□□ 0.59
CMTM3-212ENST00000566121 UQCRFS1P1P0C7P4 283 aa18.73■□□□□ 0.59
CMTM3-212ENST00000566121 SP3Q02447 781 aa18.73■□□□□ 0.59
CMTM3-212ENST00000566121 NFIAQ12857 509 aa18.73■□□□□ 0.59
CMTM3-212ENST00000566121 CCL15Q16663 113 aa18.73■□□□□ 0.59
CMTM3-212ENST00000566121 ZFYVE28Q9HCC9 887 aa18.73■□□□□ 0.59
CMTM3-212ENST00000566121 ATRNL1Q5VV63 1379 aa18.72■□□□□ 0.59
CMTM3-212ENST00000566121 LDHCP07864 332 aa18.72■□□□□ 0.59
CMTM3-212ENST00000566121 OTOP1Q7RTM1 612 aa18.72■□□□□ 0.59
CMTM3-212ENST00000566121 ZKSCAN4Q969J2 545 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-212ENST00000566121 HMG20BQ9P0W2 317 aa18.72■□□□□ 0.59
CMTM3-212ENST00000566121 TNNQ9UQP3 1299 aa18.72■□□□□ 0.59
CMTM3-212ENST00000566121 CXCL11O14625 94 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 IRF6O14896 467 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 TBC1D12O60347 775 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 GSTO1P78417 241 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 TMED8Q6PL24 325 aaPredicted RBP18.71■□□□□ 0.59
CMTM3-212ENST00000566121 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 SPATA5Q8NB90 893 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 CLUAP1Q96AJ1 413 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 OTUD5Q96G74 571 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 MROH7-TTC4A0A0A0MT08 1334 aa18.71■□□□□ 0.59
CMTM3-212ENST00000566121 PHF20L1A8MW92 1017 aa18.7■□□□□ 0.58
CMTM3-212ENST00000566121 TLR2O60603 784 aa18.7■□□□□ 0.58
CMTM3-212ENST00000566121 GNRH1P01148 92 aa18.7■□□□□ 0.58
CMTM3-212ENST00000566121 MS4A1P11836 297 aa18.7■□□□□ 0.58
CMTM3-212ENST00000566121 DZIP1Q86YF9 867 aaKnown RBP18.7■□□□□ 0.58
CMTM3-212ENST00000566121 NSUN4Q96CB9 384 aaKnown RBP18.7■□□□□ 0.58
CMTM3-212ENST00000566121 NEUROD6Q96NK8 337 aa18.7■□□□□ 0.58
CMTM3-212ENST00000566121 ABCF2Q9UG63 623 aa18.7■□□□□ 0.58
CMTM3-212ENST00000566121 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-212ENST00000566121 RGS3P49796 1198 aa18.69■□□□□ 0.58
CMTM3-212ENST00000566121 RHBDL3P58872 404 aa18.69■□□□□ 0.58
CMTM3-212ENST00000566121 MECOMQ03112 1051 aa18.69■□□□□ 0.58
CMTM3-212ENST00000566121 MIGA2Q7L4E1 593 aa18.69■□□□□ 0.58
CMTM3-212ENST00000566121 ANKRD23Q86SG2 305 aa18.69■□□□□ 0.58
CMTM3-212ENST00000566121 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
CMTM3-212ENST00000566121 ZNF384Q8TF68 577 aa18.69■□□□□ 0.58
CMTM3-212ENST00000566121 EFCC1Q9HA90 598 aa18.69■□□□□ 0.58
CMTM3-212ENST00000566121 PTPN22Q9Y2R2 807 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms