RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 GOLGA6L4A6NEF3 574 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 SGSM2O43147 1006 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 INTS5Q6P9B9 1019 aaKnown RBP10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 CPLX2Q6PUV4 134 aaKnown RBP10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 FERMT3Q86UX7 667 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 ERC1Q8IUD2 1116 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 PROM2Q8N271 834 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 JPH2Q9BR39 696 aaPredicted RBP10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 GNL3LQ9NVN8 582 aaKnown RBP10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 IMPACTQ9P2X3 320 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 TUBGCP6Q96RT7 1819 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 KLHL33A6NCF5 533 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 USP8P40818 1118 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 CNNM3Q8NE01 707 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 RABGGTAQ92696 567 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 TACO1Q9BSH4 297 aaKnown RBP10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 TBC1D2BQ9UPU7 963 aa10.53□□□□□ -0.72
AC138869.3-201ENST00000563960 BECN2A8MW95 431 aa10.52□□□□□ -0.72
AC138869.3-201ENST00000563960 CALRP27797 417 aaKnown RBP10.52□□□□□ -0.72
AC138869.3-201ENST00000563960 NAIF1Q69YI7 327 aaPredicted RBP10.52□□□□□ -0.72
AC138869.3-201ENST00000563960 GBP6Q6ZN66 633 aa10.52□□□□□ -0.72
AC138869.3-201ENST00000563960 CCDC150Q8NCX0 1101 aa10.52□□□□□ -0.72
AC138869.3-201ENST00000563960 STAG1Q8WVM7 1258 aa10.52□□□□□ -0.72
AC138869.3-201ENST00000563960 RILPL2Q969X0 211 aa10.52□□□□□ -0.72
AC138869.3-201ENST00000563960 MAP3K2Q9Y2U5 619 aa10.52□□□□□ -0.72
AC138869.3-201ENST00000563960 C5P01031 1676 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 SFPQP23246 707 aaKnown RBP eCLIP10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 MAP3K9P80192 1104 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 PPP2R3AQ06190 1150 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 BRD3Q15059 726 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 BEND6Q5SZJ8 279 aaPredicted RBP10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 TTC19Q6DKK2 380 aaPredicted RBP10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 CDC37L1Q7L3B6 337 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 RIC3Q7Z5B4 369 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 AMIGO3Q86WK7 504 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 GIMAP7Q8NHV1 300 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 PGBD1Q96JS3 809 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 SPATA32Q96LK8 384 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 A1CFQ9NQ94 594 aaKnown RBP10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 CCDC87Q9NVE4 849 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 TFIP11Q9UBB9 837 aaKnown RBP10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 SNX14Q9Y5W7 946 aa10.52□□□□□ -0.73
AC138869.3-201ENST00000563960 A0A087WWV3 80 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 SCRN1Q12765 414 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 JAKMIP3Q5VZ66 844 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 ANKRD13DQ6ZTN6 518 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 SALL3Q9BXA9 1300 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 NEBLO76041 1014 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 CPA1P15085 419 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 PAX7P23759 505 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 ELF1P32519 619 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 TXLNAP40222 546 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 CCT4P50991 539 aaKnown RBP10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 EN1Q05925 392 aaPredicted RBP10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 ST3GAL1Q11201 340 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 STX1AQ16623 288 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 TXNRD1Q16881 649 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 SKIDA1Q1XH10 827 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 HDXQ7Z353 690 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 MSL3Q8N5Y2 521 aaKnown RBP10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 LEO1Q8WVC0 666 aaPredicted RBP10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 BORCS6Q96GS4 357 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 SCAND2PQ9GZW5 306 aaPredicted RBP10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 FAM107BQ9H098 131 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 SLC24A3Q9HC58 644 aa10.51□□□□□ -0.73
AC138869.3-201ENST00000563960 ADCY9O60503 1353 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 ATP5J2-PTCD1G3V325 749 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 H0YHG0 523 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 PHACTR2O75167 634 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 GPTP24298 496 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 SARNPP82979 210 aaKnown RBP10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 CWF19L2Q2TBE0 894 aaKnown RBP10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 ISM2Q6H9L7 571 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 KSR2Q6VAB6 950 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 TMC6Q7Z403 805 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 DEFB132Q7Z7B7 95 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 RASEFQ8IZ41 740 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 BICD2Q8TD16 824 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 HNRNPLLQ8WVV9 542 aaKnown RBP10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 SUGCTQ9HAC7 445 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 MRFAP1Q9Y605 127 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 SRCAPQ6ZRS2 3230 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 HMMRO75330 724 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 FAM204AQ9H8W3 233 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 PAPPAQ13219 1627 aa10.5□□□□□ -0.73
AC138869.3-201ENST00000563960 BTAF1O14981 1849 aa10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 UBR2Q8IWV8 1755 aa10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 GNPATO15228 680 aa10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 CCP110O43303 1012 aa10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 EPB41L2O43491 1005 aaKnown RBP10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 EIF3JO75822 258 aaKnown RBP10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 NEDD9Q14511 834 aa10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 LARP1BQ659C4 914 aaKnown RBP10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 WWC2Q6AWC2 1192 aa10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 GOLGA1Q92805 767 aa10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 MCM8Q9UJA3 840 aa10.49□□□□□ -0.73
AC138869.3-201ENST00000563960 L1RE1Q9UN81 338 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms