RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 SND1Q7KZF4 910 aaKnown RBP eCLIP11.47□□□□□ -0.571e-7■■■□□ 16.2
GTF3C1-202ENST00000561623 G2E3Q7L622 706 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 CARD14Q9BXL6 1004 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 COMMD10Q9Y6G5 202 aa11.47□□□□□ -0.57
GTF3C1-202ENST00000561623 ACEP12821 1306 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 TTC21AQ8NDW8 1320 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 ALDH1L1O75891 902 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 MTHFSDQ2M296 383 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 MRRFQ96E11 262 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 PRAG1Q86YV5 1406 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 KIF14Q15058 1648 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 SYNRGQ9UMZ2 1314 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 LPXNO60711 386 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 BRD1O95696 1058 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 ADKP55263 362 aaKnown RBP11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 IDI1Q13907 227 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 IQUBQ8NA54 791 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 PPFIBP2Q8ND30 876 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 RNF123Q5XPI4 1314 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 E7EVH7 732 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 ARHGAP6O43182 974 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 ZNF202O95125 648 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 TCIRG1Q13488 830 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 STMN2Q93045 179 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 FAM227BQ96M60 508 aa11.46□□□□□ -0.57
GTF3C1-202ENST00000561623 POLR2DO15514 142 aaKnown RBP11.46□□□□□ -0.58
GTF3C1-202ENST00000561623 SNRPA1P09661 255 aaKnown RBP11.46□□□□□ -0.58
GTF3C1-202ENST00000561623 EIF4A2Q14240 407 aaKnown RBP11.46□□□□□ -0.58
GTF3C1-202ENST00000561623 ATL3Q6DD88 541 aa11.46□□□□□ -0.58
GTF3C1-202ENST00000561623 TRMT44Q8IYL2 757 aaKnown RBP11.46□□□□□ -0.58
GTF3C1-202ENST00000561623 SLF1Q9BQI6 1058 aa11.46□□□□□ -0.58
GTF3C1-202ENST00000561623 JAK2O60674 1132 aa11.46□□□□□ -0.58
GTF3C1-202ENST00000561623 TBC1D8BQ0IIM8 1120 aa11.46□□□□□ -0.58
GTF3C1-202ENST00000561623 MIGA1Q8NAN2 632 aa11.46□□□□□ -0.58
GTF3C1-202ENST00000561623 ERMNQ8TAM6 284 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 MPHOSPH6Q99547 160 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 SYNCQ9H7C4 482 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 EHMT1Q9H9B1 1298 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 CAPN7Q9Y6W3 813 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 IQGAP2Q13576 1575 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 KRT28Q7Z3Y7 464 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 KLHL7Q8IXQ5 586 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 CABS1Q96KC9 395 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 TRIM7Q9C029 511 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 MKRN1Q9UHC7 482 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 RXRBP28702 533 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 CALCOCO2Q13137 446 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 PRKG1Q13976 671 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 DCAF17Q5H9S7 520 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 CEP85LQ5SZL2 805 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 SECISBP2LQ93073 1101 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 TESK2Q96S53 571 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 POLKQ9UBT6 870 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 PIK3C2GO75747 1445 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 ATP2A1O14983 1001 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 ARHGAP25P42331 645 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 TAF12Q16514 161 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 IFT74Q96LB3 600 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 TAB2Q9NYJ8 693 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 NKIRAS1Q9NYS0 192 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 IL15P40933 162 aaPredicted RBP11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 LMNTD2Q8IXW0 634 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 IFT20Q8IY31 132 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 DESI2Q9BSY9 194 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 PHF8Q9UPP1 1060 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 ATP6V0A2Q9Y487 856 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 TUBB2AQ13885 445 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 DTHD1Q6ZMT9 781 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 CCDC26Q8TAB7 109 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 TUBB2BQ9BVA1 445 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 NFE2L3Q9Y4A8 694 aa11.45□□□□□ -0.58
GTF3C1-202ENST00000561623 ARID4AP29374 1257 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 GPR161Q8N6U8 529 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 F8W031 263 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 BAIAP2L1Q9UHR4 511 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 ERCC3P19447 782 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 LIG3P49916 1009 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 CDCA7Q9BWT1 371 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 SWAP70Q9UH65 585 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 BAG3O95817 575 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 BIRC2Q13490 618 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 SPOUT1Q5T280 376 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 BEND3Q5T5X7 828 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 CALM1P0DP23 149 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 CALM2P0DP24 149 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 CALM3P0DP25 149 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 PSMC4P43686 418 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 UAP1Q16222 522 aaPredicted RBP11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 MAGEB6Q8N7X4 407 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 WDR66Q8TBY9 1149 aa11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 PPANQ9NQ55 473 aaKnown RBP11.44□□□□□ -0.58
GTF3C1-202ENST00000561623 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 GNGT1P63211 74 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 KRT79Q5XKE5 535 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 IFNL2Q8IZJ0 200 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 TACO1Q9BSH4 297 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.43□□□□□ -0.582e-6■■■■■ 29.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms