RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 SLITRK4Q8IW52 837 aa8.78□□□□□ -1
MARK3-220ENST00000560417 UBXN4Q92575 508 aa8.78□□□□□ -1
MARK3-220ENST00000560417 CBX8Q9HC52 389 aa8.78□□□□□ -1
MARK3-220ENST00000560417 KRT82Q9NSB4 513 aa8.78□□□□□ -1
MARK3-220ENST00000560417 ADAM11O75078 769 aa8.77□□□□□ -1.01
MARK3-220ENST00000560417 CILPO75339 1184 aa8.77□□□□□ -1.01
MARK3-220ENST00000560417 SOX9P48436 509 aa8.77□□□□□ -1.01
MARK3-220ENST00000560417 POU4F3Q15319 338 aa8.77□□□□□ -1.01
MARK3-220ENST00000560417 ARMC5Q96C12 935 aa8.77□□□□□ -1.01
MARK3-220ENST00000560417 TRIM11Q96F44 468 aa8.77□□□□□ -1.01
MARK3-220ENST00000560417 ENAMQ9NRM1 1142 aa8.77□□□□□ -1.01
MARK3-220ENST00000560417 WIPF1O43516 503 aa8.76□□□□□ -1.01
MARK3-220ENST00000560417 SELPP16109 830 aa8.76□□□□□ -1.01
MARK3-220ENST00000560417 LMNB1P20700 586 aa8.76□□□□□ -1.01
MARK3-220ENST00000560417 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
MARK3-220ENST00000560417 MAOBP27338 520 aa8.76□□□□□ -1.01
MARK3-220ENST00000560417 COL9A2Q14055 689 aaPredicted RBP8.76□□□□□ -1.01
MARK3-220ENST00000560417 MPP2Q14168 576 aa8.76□□□□□ -1.01
MARK3-220ENST00000560417 FOXD4L6Q3SYB3 417 aaPredicted RBP8.76□□□□□ -1.01
MARK3-220ENST00000560417 MAP1SQ66K74 1059 aaPredicted RBP8.76□□□□□ -1.01
MARK3-220ENST00000560417 FOXD4L3Q6VB84 417 aaPredicted RBP8.76□□□□□ -1.01
MARK3-220ENST00000560417 SVOPQ8N4V2 548 aa8.76□□□□□ -1.01
MARK3-220ENST00000560417 FBXO27Q8NI29 283 aa8.76□□□□□ -1.01
MARK3-220ENST00000560417 CORO1BQ9BR76 489 aa8.76□□□□□ -1.01
MARK3-220ENST00000560417 GINM1Q9NU53 330 aa8.76□□□□□ -1.01
MARK3-220ENST00000560417 A0A0A0MRY4 1105 aa8.75□□□□□ -1.01
MARK3-220ENST00000560417 ATP2B1P20020 1258 aa8.75□□□□□ -1.01
MARK3-220ENST00000560417 CD68P34810 354 aaPredicted RBP8.75□□□□□ -1.01
MARK3-220ENST00000560417 SNRPNP63162 240 aaKnown RBP8.75□□□□□ -1.01
MARK3-220ENST00000560417 APOBRQ0VD83 1088 aa8.75□□□□□ -1.01
MARK3-220ENST00000560417 NEDD1Q8NHV4 660 aa8.75□□□□□ -1.01
MARK3-220ENST00000560417 GPBAR1Q8TDU6 330 aa8.75□□□□□ -1.01
MARK3-220ENST00000560417 JARID2Q92833 1246 aaPredicted RBP8.75□□□□□ -1.01
MARK3-220ENST00000560417 CCDC86Q9H6F5 360 aaKnown RBP8.75□□□□□ -1.01
MARK3-220ENST00000560417 KCNK4Q9NYG8 393 aa8.75□□□□□ -1.01
MARK3-220ENST00000560417 LOC100289279A0A1B0GTE1 492 aa8.74□□□□□ -1.01
MARK3-220ENST00000560417 DLL1O00548 723 aa8.74□□□□□ -1.01
MARK3-220ENST00000560417 DDX3YO15523 660 aaKnown RBP8.74□□□□□ -1.01
MARK3-220ENST00000560417 ZNF862O60290 1169 aa8.74□□□□□ -1.01
MARK3-220ENST00000560417 TRAPPC3LQ5T215 181 aa8.74□□□□□ -1.01
MARK3-220ENST00000560417 FBXO11Q86XK2 927 aa8.74□□□□□ -1.01
MARK3-220ENST00000560417 FMR1NBQ8N0W7 255 aaPredicted RBP8.74□□□□□ -1.01
MARK3-220ENST00000560417 KCNB2Q92953 911 aa8.74□□□□□ -1.01
MARK3-220ENST00000560417 NKD1Q969G9 470 aa8.74□□□□□ -1.01
MARK3-220ENST00000560417 ZC3H12CQ9C0D7 883 aaKnown RBP8.74□□□□□ -1.01
MARK3-220ENST00000560417 EFR3BQ9Y2G0 817 aa8.74□□□□□ -1.01
MARK3-220ENST00000560417 DLGAP3O95886 979 aa8.73□□□□□ -1.01
MARK3-220ENST00000560417 NASPP49321 788 aaPredicted RBP8.73□□□□□ -1.01
MARK3-220ENST00000560417 NLRP12P59046 1061 aa8.73□□□□□ -1.01
MARK3-220ENST00000560417 RPL6Q02878 288 aaKnown RBP8.73□□□□□ -1.01
MARK3-220ENST00000560417 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.73□□□□□ -1.01
MARK3-220ENST00000560417 REC114Q7Z4M0 266 aa8.73□□□□□ -1.01
MARK3-220ENST00000560417 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.73□□□□□ -1.018e-7■□□□□ 10.2
MARK3-220ENST00000560417 RRAGCQ9HB90 399 aa8.73□□□□□ -1.01
MARK3-220ENST00000560417 RBL2Q08999 1139 aa8.72□□□□□ -1.01
MARK3-220ENST00000560417 CWF19L2Q2TBE0 894 aaKnown RBP8.72□□□□□ -1.01
MARK3-220ENST00000560417 KIF4BQ2VIQ3 1234 aa8.72□□□□□ -1.01
MARK3-220ENST00000560417 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
MARK3-220ENST00000560417 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
MARK3-220ENST00000560417 WDR89Q96FK6 387 aaPredicted RBP8.72□□□□□ -1.01
MARK3-220ENST00000560417 PPP1R1BQ9UD71 204 aaPredicted RBP8.72□□□□□ -1.01
MARK3-220ENST00000560417 GFRA2O00451 464 aa8.71□□□□□ -1.02
MARK3-220ENST00000560417 GNB5O14775 395 aa8.71□□□□□ -1.02
MARK3-220ENST00000560417 TLR3O15455 904 aaKnown RBP8.71□□□□□ -1.02
MARK3-220ENST00000560417 REXO1Q8N1G1 1221 aaKnown RBP8.71□□□□□ -1.02
MARK3-220ENST00000560417 DHX38Q92620 1227 aaKnown RBP8.71□□□□□ -1.02
MARK3-220ENST00000560417 PLVAPQ9BX97 442 aa8.71□□□□□ -1.02
MARK3-220ENST00000560417 STRIP2Q9ULQ0 834 aa8.71□□□□□ -1.02
MARK3-220ENST00000560417 PCDHGC5Q9Y5F6 944 aa8.71□□□□□ -1.02
MARK3-220ENST00000560417 SYNGAP1Q96PV0 1343 aa8.71□□□□□ -1.02
MARK3-220ENST00000560417 LIG1P18858 919 aa8.7□□□□□ -1.02
MARK3-220ENST00000560417 CDK8P49336 464 aa8.7□□□□□ -1.02
MARK3-220ENST00000560417 USP26Q9BXU7 913 aa8.7□□□□□ -1.02
MARK3-220ENST00000560417 PCDHA4Q9UN74 947 aa8.7□□□□□ -1.02
MARK3-220ENST00000560417 POLR3KQ9Y2Y1 108 aaPredicted RBP8.7□□□□□ -1.02
MARK3-220ENST00000560417 BPNT1O95861 308 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 GTF2F1P35269 517 aaKnown RBP eCLIP8.69□□□□□ -1.02
MARK3-220ENST00000560417 RAC1P63000 192 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 INPP5AQ14642 412 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 HP1BP3Q5SSJ5 553 aaPredicted RBP8.69□□□□□ -1.02
MARK3-220ENST00000560417 UBASH3BQ8TF42 649 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 WDR18Q9BV38 432 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 BRMS1Q9HCU9 246 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 MKL2Q9ULH7 1088 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 PRR36Q9H6K5 1346 aa8.69□□□□□ -1.02
MARK3-220ENST00000560417 ATE1O95260 518 aa8.68□□□□□ -1.02
MARK3-220ENST00000560417 WISP1O95388 367 aa8.68□□□□□ -1.02
MARK3-220ENST00000560417 ZNF165P49910 485 aa8.68□□□□□ -1.02
MARK3-220ENST00000560417 ZC3H12AQ5D1E8 599 aaKnown RBP8.68□□□□□ -1.02
MARK3-220ENST00000560417 EXOSC6Q5RKV6 272 aaKnown RBP8.68□□□□□ -1.02
MARK3-220ENST00000560417 DIEXFQ68CQ4 756 aaKnown RBP8.68□□□□□ -1.02
MARK3-220ENST00000560417 LRFN4Q6PJG9 635 aa8.68□□□□□ -1.02
MARK3-220ENST00000560417 ACSBG1Q96GR2 724 aa8.68□□□□□ -1.02
MARK3-220ENST00000560417 TMPRSS13Q9BYE2 586 aa8.68□□□□□ -1.02
MARK3-220ENST00000560417 EHMT1Q9H9B1 1298 aa8.68□□□□□ -1.02
MARK3-220ENST00000560417 LOC105371045A0A1W2PR82 267 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 MEGF11A6BM72 1044 aa8.67□□□□□ -1.02
MARK3-220ENST00000560417 SPDYE3A6NKU9 549 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms