RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 DYNC1LI2O43237 492 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-218ENST00000560236 PTPN12Q05209 780 aaKnown RBP6.91□□□□□ -1.3
LRRC28-218ENST00000560236 SEZ6L2Q6UXD5 910 aa6.91□□□□□ -1.3
LRRC28-218ENST00000560236 ASIC4Q96FT7 647 aa6.91□□□□□ -1.3
LRRC28-218ENST00000560236 FAM129BQ96TA1 746 aa6.91□□□□□ -1.3
LRRC28-218ENST00000560236 WDR18Q9BV38 432 aa6.91□□□□□ -1.3
LRRC28-218ENST00000560236 PAK6Q9NQU5 681 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-218ENST00000560236 COL19A1Q14993 1142 aa6.9□□□□□ -1.3
LRRC28-218ENST00000560236 OGFOD3Q6PK18 319 aa6.9□□□□□ -1.3
LRRC28-218ENST00000560236 TMC1Q8TDI8 760 aa6.9□□□□□ -1.3
LRRC28-218ENST00000560236 CITED4Q96RK1 184 aa6.9□□□□□ -1.3
LRRC28-218ENST00000560236 ABCB6Q9NP58 842 aa6.9□□□□□ -1.3
LRRC28-218ENST00000560236 PPP1R9AQ9ULJ8 1098 aa6.9□□□□□ -1.3
LRRC28-218ENST00000560236 GADD45BO75293 160 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-218ENST00000560236 RPS26P11Q5JNZ5 115 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-218ENST00000560236 PRPF40BQ6NWY9 871 aaKnown RBP6.89□□□□□ -1.31
LRRC28-218ENST00000560236 CCDC74AQ96AQ1 378 aa6.89□□□□□ -1.31
LRRC28-218ENST00000560236 DNAJC25Q9H1X3 360 aa6.89□□□□□ -1.31
LRRC28-218ENST00000560236 SLC5A6Q9Y289 635 aa6.89□□□□□ -1.31
LRRC28-218ENST00000560236 SYNGAP1Q96PV0 1343 aa6.89□□□□□ -1.31
LRRC28-218ENST00000560236 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
LRRC28-218ENST00000560236 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
LRRC28-218ENST00000560236 EIF1AYO14602 144 aaKnown RBP6.88□□□□□ -1.31
LRRC28-218ENST00000560236 JUNBP17275 347 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-218ENST00000560236 ITGB5P18084 799 aa6.88□□□□□ -1.31
LRRC28-218ENST00000560236 ZNF157P51786 506 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-218ENST00000560236 CYP27C1Q4G0S4 372 aa6.88□□□□□ -1.31
LRRC28-218ENST00000560236 OGFOD2Q6N063 350 aa6.88□□□□□ -1.31
LRRC28-218ENST00000560236 BCL7CQ8WUZ0 217 aaPredicted RBP6.88□□□□□ -1.31
LRRC28-218ENST00000560236 PIDD1Q9HB75 910 aa6.88□□□□□ -1.31
LRRC28-218ENST00000560236 TRAK1Q9UPV9 953 aa6.88□□□□□ -1.31
LRRC28-218ENST00000560236 TMPRSS2O15393 492 aa6.87□□□□□ -1.31
LRRC28-218ENST00000560236 SLFN14P0C7P3 912 aa6.87□□□□□ -1.31
LRRC28-218ENST00000560236 LIG1P18858 919 aa6.87□□□□□ -1.31
LRRC28-218ENST00000560236 STK11IPQ8N1F8 1099 aa6.87□□□□□ -1.31
LRRC28-218ENST00000560236 ZC3H12CQ9C0D7 883 aaKnown RBP6.87□□□□□ -1.31
LRRC28-218ENST00000560236 NIF3L1Q9GZT8 377 aa6.87□□□□□ -1.31
LRRC28-218ENST00000560236 CCDC86Q9H6F5 360 aaKnown RBP6.87□□□□□ -1.31
LRRC28-218ENST00000560236 CRIM1Q9NZV1 1036 aa6.87□□□□□ -1.31
LRRC28-218ENST00000560236 GPR182O15218 404 aa6.86□□□□□ -1.31
LRRC28-218ENST00000560236 HNRNPUQ00839 825 aaKnown RBP eCLIP6.86□□□□□ -1.31
LRRC28-218ENST00000560236 FAAP100Q0VG06 881 aa6.86□□□□□ -1.31
LRRC28-218ENST00000560236 CDK5R2Q13319 367 aa6.86□□□□□ -1.31
LRRC28-218ENST00000560236 FZD5Q13467 585 aa6.86□□□□□ -1.31
LRRC28-218ENST00000560236 GRM2Q14416 872 aa6.86□□□□□ -1.31
LRRC28-218ENST00000560236 PLCL1Q15111 1095 aa6.86□□□□□ -1.31
LRRC28-218ENST00000560236 WDR89Q96FK6 387 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-218ENST00000560236 ATXN3LQ9H3M9 355 aa6.86□□□□□ -1.31
LRRC28-218ENST00000560236 FAM87AP0C7U9 286 aa6.85□□□□□ -1.31
LRRC28-218ENST00000560236 ID3Q02535 119 aa6.85□□□□□ -1.31
LRRC28-218ENST00000560236 ZNF574Q6ZN55 896 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-218ENST00000560236 FANCD2OSQ96PS1 177 aa6.85□□□□□ -1.31
LRRC28-218ENST00000560236 ZNF862O60290 1169 aa6.84□□□□□ -1.31
LRRC28-218ENST00000560236 GSTP1P09211 210 aaKnown RBP6.84□□□□□ -1.31
LRRC28-218ENST00000560236 DTHD1Q6ZMT9 781 aa6.84□□□□□ -1.31
LRRC28-218ENST00000560236 SPRED2Q7Z698 418 aa6.84□□□□□ -1.31
LRRC28-218ENST00000560236 POU5F2Q8N7G0 328 aa6.84□□□□□ -1.31
LRRC28-218ENST00000560236 GLIS3Q8NEA6 775 aa6.84□□□□□ -1.31
LRRC28-218ENST00000560236 EPS8L3Q8TE67 593 aaKnown RBP6.84□□□□□ -1.31
LRRC28-218ENST00000560236 MISP3Q96FF7 219 aa6.84□□□□□ -1.31
LRRC28-218ENST00000560236 CSRNP1Q96S65 589 aa6.84□□□□□ -1.31
LRRC28-218ENST00000560236 IGHA2P01877 340 aa6.83□□□□□ -1.32
LRRC28-218ENST00000560236 PPP2R3AQ06190 1150 aa6.83□□□□□ -1.32
LRRC28-218ENST00000560236 KIF4BQ2VIQ3 1234 aa6.83□□□□□ -1.32
LRRC28-218ENST00000560236 ZNF792Q3KQV3 632 aa6.83□□□□□ -1.32
LRRC28-218ENST00000560236 SMYD4Q8IYR2 804 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-218ENST00000560236 FAM181AQ8N9Y4 354 aa6.83□□□□□ -1.32
LRRC28-218ENST00000560236 DMRTB1Q96MA1 342 aa6.83□□□□□ -1.32
LRRC28-218ENST00000560236 DISC1Q9NRI5 854 aa6.83□□□□□ -1.32
LRRC28-218ENST00000560236 KRT82Q9NSB4 513 aa6.83□□□□□ -1.32
LRRC28-218ENST00000560236 PPP4R2Q9NY27 417 aa6.83□□□□□ -1.32
LRRC28-218ENST00000560236 GPN3Q9UHW5 284 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-218ENST00000560236 BIN1O00499 593 aa6.82□□□□□ -1.32
LRRC28-218ENST00000560236 RNGTTO60942 597 aaKnown RBP6.82□□□□□ -1.32
LRRC28-218ENST00000560236 PAPLNO95428 1278 aa6.82□□□□□ -1.32
LRRC28-218ENST00000560236 FCGRTP55899 365 aa6.82□□□□□ -1.32
LRRC28-218ENST00000560236 BNIP3Q12983 259 aa6.82□□□□□ -1.32
LRRC28-218ENST00000560236 TTLL4Q14679 1199 aa6.82□□□□□ -1.32
LRRC28-218ENST00000560236 TXNDC2Q86VQ3 553 aa6.82□□□□□ -1.32
LRRC28-218ENST00000560236 WFDC3Q8IUB2 231 aa6.82□□□□□ -1.32
LRRC28-218ENST00000560236 PLD6Q8N2A8 252 aaKnown RBP6.82□□□□□ -1.32
LRRC28-218ENST00000560236 NETO1Q8TDF5 533 aa6.82□□□□□ -1.32
LRRC28-218ENST00000560236 TMEM39AQ9NV64 488 aa6.82□□□□□ -1.32
LRRC28-218ENST00000560236 C8AP07357 584 aa6.81□□□□□ -1.32
LRRC28-218ENST00000560236 HCLS1P14317 486 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-218ENST00000560236 C14orf37Q86TY3 774 aa6.81□□□□□ -1.32
LRRC28-218ENST00000560236 KCNB2Q92953 911 aa6.81□□□□□ -1.32
LRRC28-218ENST00000560236 ALKBH8Q96BT7 664 aaKnown RBP6.81□□□□□ -1.32
LRRC28-218ENST00000560236 RBCK1Q9BYM8 510 aa6.81□□□□□ -1.32
LRRC28-218ENST00000560236 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
LRRC28-218ENST00000560236 PCDHGC5Q9Y5F6 944 aa6.81□□□□□ -1.32
LRRC28-218ENST00000560236 ARHGAP27Q6ZUM4 889 aa6.8□□□□□ -1.32
LRRC28-218ENST00000560236 SSU72Q9NP77 194 aaKnown RBP6.8□□□□□ -1.32
LRRC28-218ENST00000560236 PCOLCE2Q9UKZ9 415 aa6.8□□□□□ -1.32
LRRC28-218ENST00000560236 LEFTY1O75610 366 aa6.79□□□□□ -1.32
LRRC28-218ENST00000560236 CD8BP10966 210 aa6.79□□□□□ -1.32
LRRC28-218ENST00000560236 XRCC5P13010 732 aaKnown RBP6.79□□□□□ -1.32
LRRC28-218ENST00000560236 FUT4P22083 530 aa6.79□□□□□ -1.32
LRRC28-218ENST00000560236 JAG1P78504 1218 aa6.79□□□□□ -1.32
LRRC28-218ENST00000560236 PRKCQQ04759 706 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms