RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 OTUD6AQ7L8S5 288 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 CEP63Q96MT8 703 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 MAP3K19Q56UN5 1328 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 A0A1W2PP64 1363 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 PPIP5K2O43314 1243 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 Q6ZUG5 572 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 NSMCE1Q8WV22 266 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 CD2APQ9Y5K6 639 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 ABCD1P33897 745 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 SHROOM2Q13796 1616 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 ADGRL2O95490 1459 aa9.41□□□□□ -0.9
CHD8-213ENST00000557364 SPTLC2O15270 562 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 EXOC8Q8IYI6 725 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.4□□□□□ -0.93e-7■■■□□ 17.5
CHD8-213ENST00000557364 EFCAB6Q5THR3 1501 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 SDSP20132 328 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 LIN9Q5TKA1 542 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 KRT25Q7Z3Z0 450 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 SPATA24Q86W54 205 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 APPBP2Q92624 585 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 MIS12Q9H081 205 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 ARPP21Q9UBL0 812 aaPredicted RBP9.4□□□□□ -0.9
CHD8-213ENST00000557364 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 NLRP1Q9C000 1473 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 A0A1W2PRG0 241 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 UBASH3AP57075 661 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 KIF5AQ12840 1032 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 MEIS3Q99687 375 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 URI1O94763 535 aaPredicted RBP9.4□□□□□ -0.9
CHD8-213ENST00000557364 RXRBP28702 533 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 CEP135Q66GS9 1140 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 TMC6Q7Z403 805 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 IQSEC3Q9UPP2 1182 aaPredicted RBP9.4□□□□□ -0.9
CHD8-213ENST00000557364 TRIM14Q14142 442 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 MCF2L2Q86YR7 1114 aa9.4□□□□□ -0.9
CHD8-213ENST00000557364 TRMT1LQ7Z2T5 733 aaKnown RBP9.4□□□□□ -0.91
CHD8-213ENST00000557364 SLC17A8Q8NDX2 589 aa9.4□□□□□ -0.91
CHD8-213ENST00000557364 SRRTQ9BXP5 876 aaKnown RBP9.4□□□□□ -0.91
CHD8-213ENST00000557364 CGNQ9P2M7 1197 aaKnown RBP9.4□□□□□ -0.91
CHD8-213ENST00000557364 INTS4Q96HW7 963 aaKnown RBP9.39□□□□□ -0.91
CHD8-213ENST00000557364 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.39□□□□□ -0.91
CHD8-213ENST00000557364 PARD3Q8TEW0 1356 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 ARHGEF35A5YM69 484 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 ARHGEF37A1IGU5 675 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 RNF216Q9NWF9 866 aaPredicted RBP9.39□□□□□ -0.91
CHD8-213ENST00000557364 TPCN1Q9ULQ1 816 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 UBE4AQ14139 1066 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 GSTA5Q7RTV2 222 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 DCTPP1Q9H773 170 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 ATP6V0A2Q9Y487 856 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 KDM5DQ9BY66 1539 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 EEF2P13639 858 aaKnown RBP9.39□□□□□ -0.91
CHD8-213ENST00000557364 CFAP58Q5T655 872 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 FAM212AQ96EL1 285 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 NACA2Q9H009 215 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 GCC2Q8IWJ2 1684 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 ZEB2O60315 1214 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 HSF2BPO75031 334 aa9.39□□□□□ -0.91
CHD8-213ENST00000557364 TMED8Q6PL24 325 aaPredicted RBP9.39□□□□□ -0.91
CHD8-213ENST00000557364 DDX23Q9BUQ8 820 aaKnown RBP9.39□□□□□ -0.91
CHD8-213ENST00000557364 BICC1Q9H694 974 aaKnown RBP9.39□□□□□ -0.91
CHD8-213ENST00000557364 KDM3AQ9Y4C1 1321 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 ATP10DQ9P241 1426 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 SLC4A8Q2Y0W8 1093 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 SUPT20HL1Q3ZLR7 823 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 KRT26Q7Z3Y9 468 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 MTRF1LQ9UGC7 380 aaKnown RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 KIF24Q5T7B8 1368 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 MBD4O95243 580 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 ARL1P40616 181 aaPredicted RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 TFCP2Q12800 502 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 PRPF31Q8WWY3 499 aaKnown RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 ZNF830Q96NB3 372 aaPredicted RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 FAM169AQ9Y6X4 670 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 TNNT1P13805 278 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 NMIQ13287 307 aaPredicted RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 BIRC2Q13490 618 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 CCDC42Q96M95 316 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 JPH2Q9BR39 696 aaPredicted RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 NT5C3AQ9H0P0 336 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 THRAP3Q9Y2W1 955 aaKnown RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 AFAP1L2Q8N4X5 818 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 SEMA3EO15041 775 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 ANXA1P04083 346 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 ATF7P17544 494 aaPredicted RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 ADCY7P51828 1080 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 SNW1Q13573 536 aaKnown RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 GOLGA5Q8TBA6 731 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 MMRN2Q9H8L6 949 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 PALM3A6NDB9 673 aaPredicted RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 GOLGA6CA6NDK9 693 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 GOLGA6BA6NDN3 693 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 GOLGA6DP0CG33 693 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 GOLGA6AQ9NYA3 693 aa9.38□□□□□ -0.91
CHD8-213ENST00000557364 ANGEL1Q9UNK9 670 aaKnown RBP9.38□□□□□ -0.91
CHD8-213ENST00000557364 PLEKHG3A1L390 1219 aa9.37□□□□□ -0.91
CHD8-213ENST00000557364 PRIM1P49642 420 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms