RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 C17orf99Q6UX52 265 aa19.34■□□□□ 0.69
BRF1-220ENST00000552127 C15orf52Q6ZUT6 534 aaKnown RBP19.34■□□□□ 0.69
BRF1-220ENST00000552127 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.34■□□□□ 0.69
BRF1-220ENST00000552127 USP44Q9H0E7 712 aa19.34■□□□□ 0.69
BRF1-220ENST00000552127 CSADQ9Y600 493 aa19.34■□□□□ 0.69
BRF1-220ENST00000552127 SNAP23O00161 211 aa19.33■□□□□ 0.68
BRF1-220ENST00000552127 CETPP11597 493 aa19.33■□□□□ 0.68
BRF1-220ENST00000552127 HOXD10P28358 340 aa19.33■□□□□ 0.68
BRF1-220ENST00000552127 BMP8BP34820 402 aa19.33■□□□□ 0.68
BRF1-220ENST00000552127 RBM5P52756 815 aaKnown RBP eCLIP19.33■□□□□ 0.68
BRF1-220ENST00000552127 RARSP54136 660 aaKnown RBP19.33■□□□□ 0.68
BRF1-220ENST00000552127 UBXN2AP68543 259 aa19.33■□□□□ 0.68
BRF1-220ENST00000552127 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.33■□□□□ 0.68
BRF1-220ENST00000552127 TEPSINQ96N21 525 aa19.33■□□□□ 0.68
BRF1-220ENST00000552127 GDF15Q99988 308 aa19.33■□□□□ 0.68
BRF1-220ENST00000552127 API5Q9BZZ5 524 aaKnown RBP19.33■□□□□ 0.68
BRF1-220ENST00000552127 NOB1Q9ULX3 412 aaKnown RBP19.33■□□□□ 0.68
BRF1-220ENST00000552127 MYPNQ86TC9 1320 aa19.32■□□□□ 0.68
BRF1-220ENST00000552127 KIF16BQ96L93 1317 aa19.32■□□□□ 0.68
BRF1-220ENST00000552127 SPDYE5A6NIY4 337 aa19.32■□□□□ 0.68
BRF1-220ENST00000552127 FMNL1O95466 1100 aaPredicted RBP19.32■□□□□ 0.68
BRF1-220ENST00000552127 SGPL1O95470 568 aa19.32■□□□□ 0.68
BRF1-220ENST00000552127 TNFAIP1Q13829 316 aa19.32■□□□□ 0.68
BRF1-220ENST00000552127 UNC93B1Q9H1C4 597 aa19.32■□□□□ 0.68
BRF1-220ENST00000552127 CPA4Q9UI42 421 aa19.32■□□□□ 0.68
BRF1-220ENST00000552127 PLIN1O60240 522 aa19.31■□□□□ 0.68
BRF1-220ENST00000552127 HNRNPUQ00839 825 aaKnown RBP eCLIP19.31■□□□□ 0.68
BRF1-220ENST00000552127 ZNF804AQ7Z570 1209 aa19.31■□□□□ 0.68
BRF1-220ENST00000552127 LRIT3Q3SXY7 679 aa19.3■□□□□ 0.68
BRF1-220ENST00000552127 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
BRF1-220ENST00000552127 PUS3Q9BZE2 481 aaKnown RBP19.3■□□□□ 0.68
BRF1-220ENST00000552127 ZNF70Q9UC06 446 aaPredicted RBP19.3■□□□□ 0.68
BRF1-220ENST00000552127 MROH5Q6ZUA9 1318 aa19.29■□□□□ 0.68
BRF1-220ENST00000552127 EYSQ5T1H1 3165 aa19.29■□□□□ 0.68
BRF1-220ENST00000552127 IRF6O14896 467 aa19.29■□□□□ 0.68
BRF1-220ENST00000552127 BCAMP50895 628 aa19.29■□□□□ 0.68
BRF1-220ENST00000552127 SNAPC2Q13487 334 aa19.29■□□□□ 0.68
BRF1-220ENST00000552127 TMEM39BQ9GZU3 492 aa19.29■□□□□ 0.68
BRF1-220ENST00000552127 JAG2Q9Y219 1238 aa19.29■□□□□ 0.68
BRF1-220ENST00000552127 IL1R1P14778 569 aa19.28■□□□□ 0.68
BRF1-220ENST00000552127 FKBP1AP62942 108 aaKnown RBP19.28■□□□□ 0.68
BRF1-220ENST00000552127 PRKCZQ05513 592 aa19.28■□□□□ 0.68
BRF1-220ENST00000552127 UBE4AQ14139 1066 aa19.28■□□□□ 0.68
BRF1-220ENST00000552127 ERO1BQ86YB8 467 aa19.28■□□□□ 0.68
BRF1-220ENST00000552127 TDRD3Q9H7E2 651 aaKnown RBP19.28■□□□□ 0.68
BRF1-220ENST00000552127 SNCAIPQ9Y6H5 919 aa19.28■□□□□ 0.68
BRF1-220ENST00000552127 MGAMO43451 1857 aa19.27■□□□□ 0.68
BRF1-220ENST00000552127 TCP10L2B9ZVM9 353 aa19.27■□□□□ 0.68
BRF1-220ENST00000552127 TFRCP02786 760 aaKnown RBP19.27■□□□□ 0.68
BRF1-220ENST00000552127 UBTFL1P0CB47 393 aaPredicted RBP19.27■□□□□ 0.68
BRF1-220ENST00000552127 SLAIN1Q8ND83 568 aa19.27■□□□□ 0.68
BRF1-220ENST00000552127 ARHGAP45Q92619 1136 aa19.27■□□□□ 0.68
BRF1-220ENST00000552127 PRDM6Q9NQX0 595 aa19.27■□□□□ 0.68
BRF1-220ENST00000552127 LRRC24Q50LG9 513 aa19.26■□□□□ 0.67
BRF1-220ENST00000552127 KLHDC4Q8TBB5 520 aa19.26■□□□□ 0.67
BRF1-220ENST00000552127 ADGRA2Q96PE1 1338 aa19.25■□□□□ 0.67
BRF1-220ENST00000552127 METTL24Q5JXM2 366 aa19.25■□□□□ 0.67
BRF1-220ENST00000552127 C7orf61Q8IZ16 206 aa19.25■□□□□ 0.67
BRF1-220ENST00000552127 ZKSCAN4Q969J2 545 aaPredicted RBP19.25■□□□□ 0.67
BRF1-220ENST00000552127 PAWRQ96IZ0 340 aaKnown RBP19.25■□□□□ 0.67
BRF1-220ENST00000552127 DEFB118Q96PH6 123 aa19.25■□□□□ 0.67
BRF1-220ENST00000552127 ZMYND8Q9ULU4 1186 aaPredicted RBP19.25■□□□□ 0.67
BRF1-220ENST00000552127 GABRQQ9UN88 632 aa19.25■□□□□ 0.67
BRF1-220ENST00000552127 RFX5P48382 616 aaPredicted RBP19.24■□□□□ 0.67
BRF1-220ENST00000552127 PPIL2Q13356 520 aa19.24■□□□□ 0.67
BRF1-220ENST00000552127 TDHQ8IZJ6 230 aa19.24■□□□□ 0.67
BRF1-220ENST00000552127 VGLL2Q8N8G2 317 aa19.24■□□□□ 0.67
BRF1-220ENST00000552127 WRNIP1Q96S55 665 aa19.24■□□□□ 0.67
BRF1-220ENST00000552127 PDHXO00330 501 aa19.23■□□□□ 0.67
BRF1-220ENST00000552127 CAPN2P17655 700 aa19.23■□□□□ 0.67
BRF1-220ENST00000552127 GYG1P46976 350 aa19.23■□□□□ 0.67
BRF1-220ENST00000552127 TNNI2P48788 182 aa19.23■□□□□ 0.67
BRF1-220ENST00000552127 ANKRD23Q86SG2 305 aa19.23■□□□□ 0.67
BRF1-220ENST00000552127 SERPINA10Q9UK55 444 aa19.23■□□□□ 0.67
BRF1-220ENST00000552127 LAMA2P24043 3122 aaKnown RBP19.23■□□□□ 0.67
BRF1-220ENST00000552127 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
BRF1-220ENST00000552127 RPTORQ8N122 1335 aa19.23■□□□□ 0.67
BRF1-220ENST00000552127 IPO8O15397 1037 aaKnown RBP19.22■□□□□ 0.67
BRF1-220ENST00000552127 ADCY3O60266 1144 aa19.22■□□□□ 0.67
BRF1-220ENST00000552127 BCAR3O75815 825 aa19.22■□□□□ 0.67
BRF1-220ENST00000552127 PDE8BO95263 885 aa19.22■□□□□ 0.67
BRF1-220ENST00000552127 HIBADHP31937 336 aaKnown RBP19.22■□□□□ 0.67
BRF1-220ENST00000552127 FCGRTP55899 365 aa19.22■□□□□ 0.67
BRF1-220ENST00000552127 NECAB2Q7Z6G3 386 aa19.22■□□□□ 0.67
BRF1-220ENST00000552127 DZIP1LQ8IYY4 767 aaKnown RBP19.22■□□□□ 0.67
BRF1-220ENST00000552127 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.22■□□□□ 0.67
BRF1-220ENST00000552127 TDRD7Q8NHU6 1098 aaKnown RBP19.22■□□□□ 0.67
BRF1-220ENST00000552127 DIS3LQ8TF46 1054 aaKnown RBP19.22■□□□□ 0.67
BRF1-220ENST00000552127 FAM84BQ96KN1 310 aaPredicted RBP19.22■□□□□ 0.67
BRF1-220ENST00000552127 MEIS3Q99687 375 aa19.22■□□□□ 0.67
BRF1-220ENST00000552127 TTF2Q9UNY4 1162 aaKnown RBP19.22■□□□□ 0.67
BRF1-220ENST00000552127 HDAC5Q9UQL6 1122 aa19.22■□□□□ 0.67
BRF1-220ENST00000552127 LRRFIP2Q9Y608 721 aaKnown RBP19.22■□□□□ 0.67
BRF1-220ENST00000552127 FAM205AQ6ZU69 1335 aa19.22■□□□□ 0.67
BRF1-220ENST00000552127 EYA2O00167 538 aa19.21■□□□□ 0.67
BRF1-220ENST00000552127 INHAP05111 366 aa19.21■□□□□ 0.67
BRF1-220ENST00000552127 TRIM27P14373 513 aa19.21■□□□□ 0.67
BRF1-220ENST00000552127 ELNP15502 786 aa19.21■□□□□ 0.67
BRF1-220ENST00000552127 SYN1P17600 705 aa19.21■□□□□ 0.67
BRF1-220ENST00000552127 MAGEA10P43363 369 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms