RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 RESTQ13127 1097 aa24.59■■□□□ 1.53
RITA1-201ENST00000548278 FAM173BQ6P4H8 233 aa24.59■■□□□ 1.53
RITA1-201ENST00000548278 NSUN4Q96CB9 384 aaKnown RBP24.59■■□□□ 1.53
RITA1-201ENST00000548278 H3BQV1 296 aa24.58■■□□□ 1.53
RITA1-201ENST00000548278 PLSCR1O15162 318 aa24.58■■□□□ 1.53
RITA1-201ENST00000548278 KRT85P78386 507 aa24.58■■□□□ 1.53
RITA1-201ENST00000548278 IFFO2Q5TF58 517 aa24.58■■□□□ 1.53
RITA1-201ENST00000548278 IGDCC4Q8TDY8 1250 aa24.58■■□□□ 1.53
RITA1-201ENST00000548278 STAG1Q8WVM7 1258 aa24.58■■□□□ 1.53
RITA1-201ENST00000548278 TMEM87BQ96K49 555 aa24.58■■□□□ 1.53
RITA1-201ENST00000548278 CNNM2Q9H8M5 875 aa24.58■■□□□ 1.53
RITA1-201ENST00000548278 FDPSP14324 419 aaKnown RBP24.57■■□□□ 1.52
RITA1-201ENST00000548278 MECOMQ03112 1051 aa24.57■■□□□ 1.52
RITA1-201ENST00000548278 SDR42E1Q8WUS8 393 aa24.57■■□□□ 1.52
RITA1-201ENST00000548278 PANK2Q9BZ23 570 aa24.57■■□□□ 1.52
RITA1-201ENST00000548278 DHX16O60231 1041 aaKnown RBP24.57■■□□□ 1.52
RITA1-201ENST00000548278 DYNLL1P63167 89 aaKnown RBP24.57■■□□□ 1.52
RITA1-201ENST00000548278 CHAF1AQ13111 956 aaPredicted RBP24.57■■□□□ 1.52
RITA1-201ENST00000548278 ZNF827Q17R98 1081 aa24.57■■□□□ 1.52
RITA1-201ENST00000548278 MFSD6Q6ZSS7 791 aa24.57■■□□□ 1.52
RITA1-201ENST00000548278 RBM17Q96I25 401 aaKnown RBP24.57■■□□□ 1.52
RITA1-201ENST00000548278 KRT23Q9C075 422 aa24.57■■□□□ 1.52
RITA1-201ENST00000548278 ZSWIM5Q9P217 1185 aa24.57■■□□□ 1.52
RITA1-201ENST00000548278 C15orf52Q6ZUT6 534 aaKnown RBP24.56■■□□□ 1.52
RITA1-201ENST00000548278 SYAP1Q96A49 352 aaPredicted RBP24.56■■□□□ 1.52
RITA1-201ENST00000548278 AKT1S1Q96B36 256 aa24.56■■□□□ 1.52
RITA1-201ENST00000548278 ZSCAN16Q9H4T2 348 aaPredicted RBP24.56■■□□□ 1.52
RITA1-201ENST00000548278 KDM4AO75164 1064 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 LY9Q9HBG7 655 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 SENP2Q9HC62 589 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 MAST2Q6P0Q8 1798 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 KLRG2A4D1S0 409 aaPredicted RBP24.55■■□□□ 1.52
RITA1-201ENST00000548278 PPFIA3O75145 1194 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 PRDX5P30044 214 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 HOXA10P31260 410 aaPredicted RBP24.55■■□□□ 1.52
RITA1-201ENST00000548278 GPSM2P81274 684 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 PPARAQ07869 468 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 TTC6Q86TZ1 520 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 SGMS1Q86VZ5 419 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 RAB11FIP4Q86YS3 637 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 ANAPC4Q9UJX5 808 aa24.55■■□□□ 1.52
RITA1-201ENST00000548278 ELP1O95163 1332 aa24.54■■□□□ 1.52
RITA1-201ENST00000548278 CCDC88AQ3V6T2 1871 aa24.54■■□□□ 1.52
RITA1-201ENST00000548278 SYCE3A1L190 88 aa24.54■■□□□ 1.52
RITA1-201ENST00000548278 APBA3O96018 575 aa24.54■■□□□ 1.52
RITA1-201ENST00000548278 TMED8Q6PL24 325 aaPredicted RBP24.54■■□□□ 1.52
RITA1-201ENST00000548278 BRIP1Q9BX63 1249 aa24.54■■□□□ 1.52
RITA1-201ENST00000548278 TMEM67Q5HYA8 995 aa24.54■■□□□ 1.52
RITA1-201ENST00000548278 TDRD7Q8NHU6 1098 aaKnown RBP24.54■■□□□ 1.52
RITA1-201ENST00000548278 LIFRP42702 1097 aa24.53■■□□□ 1.52
RITA1-201ENST00000548278 APOA5Q6Q788 366 aa24.53■■□□□ 1.52
RITA1-201ENST00000548278 LRSAM1Q6UWE0 723 aa24.53■■□□□ 1.52
RITA1-201ENST00000548278 RNF41Q9H4P4 317 aaPredicted RBP24.53■■□□□ 1.52
RITA1-201ENST00000548278 BBOX1O75936 387 aa24.52■■□□□ 1.52
RITA1-201ENST00000548278 SCAND2PQ9GZW5 306 aaPredicted RBP24.52■■□□□ 1.52
RITA1-201ENST00000548278 BAZ2AQ9UIF9 1905 aaKnown RBP24.52■■□□□ 1.52
RITA1-201ENST00000548278 FOSBP53539 338 aa24.52■■□□□ 1.52
RITA1-201ENST00000548278 GIMAP6Q6P9H5 292 aa24.52■■□□□ 1.52
RITA1-201ENST00000548278 COL23A1Q86Y22 540 aaPredicted RBP24.52■■□□□ 1.52
RITA1-201ENST00000548278 CRAMP1Q96RY5 1269 aa24.52■■□□□ 1.52
RITA1-201ENST00000548278 JAG2Q9Y219 1238 aa24.52■■□□□ 1.52
RITA1-201ENST00000548278 CPLX1O14810 134 aa24.51■■□□□ 1.51
RITA1-201ENST00000548278 IFIT3O14879 490 aaKnown RBP24.51■■□□□ 1.51
RITA1-201ENST00000548278 SPTY2D1Q68D10 685 aaPredicted RBP24.51■■□□□ 1.51
RITA1-201ENST00000548278 ZNF804AQ7Z570 1209 aa24.51■■□□□ 1.51
RITA1-201ENST00000548278 TFIP11Q9UBB9 837 aaKnown RBP24.51■■□□□ 1.51
RITA1-201ENST00000548278 MYH15Q9Y2K3 1946 aa24.51■■□□□ 1.51
RITA1-201ENST00000548278 MINDY4BA8MYZ0 360 aa24.5■■□□□ 1.51
RITA1-201ENST00000548278 METAP2P50579 478 aaKnown RBP eCLIP24.5■■□□□ 1.51
RITA1-201ENST00000548278 RRP12Q5JTH9 1297 aaKnown RBP24.5■■□□□ 1.51
RITA1-201ENST00000548278 WDR66Q8TBY9 1149 aa24.5■■□□□ 1.51
RITA1-201ENST00000548278 GPR101Q96P66 508 aaPredicted RBP24.5■■□□□ 1.51
RITA1-201ENST00000548278 ATP2B4P23634 1241 aa24.5■■□□□ 1.51
RITA1-201ENST00000548278 LEO1Q8WVC0 666 aaPredicted RBP24.5■■□□□ 1.51
RITA1-201ENST00000548278 MTA3Q9BTC8 594 aa24.5■■□□□ 1.51
RITA1-201ENST00000548278 ORC3Q9UBD5 711 aaPredicted RBP24.5■■□□□ 1.51
RITA1-201ENST00000548278 KIAA1551Q9HCM1 1747 aa24.5■■□□□ 1.51
RITA1-201ENST00000548278 ANKRD31Q8N7Z5 1873 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 IGSF3O75054 1194 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 RXRBP28702 533 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 NLGN1Q8N2Q7 840 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 SPATA32Q96LK8 384 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 AATFQ9NY61 560 aaKnown RBP eCLIP24.49■■□□□ 1.51
RITA1-201ENST00000548278 NRXN2Q9P2S2 1712 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 ZBTB43O43298 467 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 UFL1O94874 794 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 ADD1P35611 737 aaKnown RBP24.49■■□□□ 1.51
RITA1-201ENST00000548278 CCDC183Q5T5S1 534 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 NFXL1Q6ZNB6 911 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 STK11IPQ8N1F8 1099 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 TOMM22Q9NS69 142 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 PODXL2Q9NZ53 605 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 GGA1Q9UJY5 639 aa24.49■■□□□ 1.51
RITA1-201ENST00000548278 SMIM22K7EJ46 135 aa24.48■■□□□ 1.51
RITA1-201ENST00000548278 TPRNQ4KMQ1 711 aa24.48■■□□□ 1.51
RITA1-201ENST00000548278 MICU3Q86XE3 530 aa24.48■■□□□ 1.51
RITA1-201ENST00000548278 RXRAP19793 462 aa24.47■■□□□ 1.51
RITA1-201ENST00000548278 CDC27P30260 824 aa24.47■■□□□ 1.51
RITA1-201ENST00000548278 GUCY1B3Q02153 619 aa24.47■■□□□ 1.51
RITA1-201ENST00000548278 DZIP1Q86YF9 867 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms