RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ADORA1P30542 326 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 RGS19P49795 217 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 GTF2A2P52657 109 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 DIXDC1Q155Q3 683 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 CDC42EP5Q6NZY7 148 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 DZIP1Q86YF9 867 aaKnown RBP11.56□□□□□ -0.56
YBX3-218ENST00000546298 CDAN1Q8IWY9 1227 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 ZNF341Q9BYN7 854 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 USP40Q9NVE5 1235 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 ABCF2Q9UG63 623 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 TNNQ9UQP3 1299 aa11.56□□□□□ -0.56
YBX3-218ENST00000546298 RPAP1Q9BWH6 1393 aaPredicted RBP11.55□□□□□ -0.56
YBX3-218ENST00000546298 SPDYE5A6NIY4 337 aa11.55□□□□□ -0.56
YBX3-218ENST00000546298 IGF2BP3O00425 579 aaKnown RBP eCLIP11.55□□□□□ -0.56
YBX3-218ENST00000546298 GJA5P36382 358 aa11.55□□□□□ -0.56
YBX3-218ENST00000546298 ATP8B2P98198 1209 aa11.55□□□□□ -0.56
YBX3-218ENST00000546298 MLLT1Q03111 559 aaPredicted RBP11.55□□□□□ -0.56
YBX3-218ENST00000546298 OS9Q13438 667 aaPredicted RBP11.55□□□□□ -0.56
YBX3-218ENST00000546298 RASGRF1Q13972 1273 aa11.55□□□□□ -0.56
YBX3-218ENST00000546298 VGLL4Q14135 290 aa11.55□□□□□ -0.56
YBX3-218ENST00000546298 ERO1BQ86YB8 467 aa11.55□□□□□ -0.56
YBX3-218ENST00000546298 FAM163AQ96GL9 167 aaPredicted RBP11.55□□□□□ -0.56
YBX3-218ENST00000546298 WRNIP1Q96S55 665 aa11.55□□□□□ -0.56
YBX3-218ENST00000546298 ZNF646O15015 1829 aaPredicted RBP11.55□□□□□ -0.56
YBX3-218ENST00000546298 ZBED9Q6R2W3 1325 aa11.55□□□□□ -0.56
YBX3-218ENST00000546298 CCL15-CCL14A0A0B4J2E2 113 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 PNMA6EA0A0J9YXQ4 647 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 ENTPD3O75355 529 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 LDHCP07864 332 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 UQCRFS1P1P0C7P4 283 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 CETPP11597 493 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 MS4A1P11836 297 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 TCP10Q12799 353 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 CCL15Q16663 113 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 FBXO46Q6PJ61 603 aaPredicted RBP11.54□□□□□ -0.56
YBX3-218ENST00000546298 POTEHQ6S545 545 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 ERICH6Q7L0X2 663 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 ITPRIPQ8IWB1 547 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 ERO1AQ96HE7 468 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 MS4A4AQ96JQ5 239 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 GPR108Q9NPR9 543 aa11.54□□□□□ -0.56
YBX3-218ENST00000546298 GSTO1P78417 241 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 SNAPC2Q13487 334 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 POLA2Q14181 598 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 ARHGEF6Q15052 776 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 MIGA2Q7L4E1 593 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 SPATA5Q8NB90 893 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 SSH3Q8TE77 659 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 BRI3BPQ8WY22 251 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 IDI2Q9BXS1 227 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 R3HDMLQ9H3Y0 253 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 ZFYVE28Q9HCC9 887 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 SNCAIPQ9Y6H5 919 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 GAKO14976 1311 aa11.53□□□□□ -0.56
YBX3-218ENST00000546298 ZBTB7BO15156 539 aaPredicted RBP11.52□□□□□ -0.57
YBX3-218ENST00000546298 SURF6O75683 361 aaKnown RBP11.52□□□□□ -0.57
YBX3-218ENST00000546298 MAP4K4O95819 1239 aaPredicted RBP11.52□□□□□ -0.57
YBX3-218ENST00000546298 PPATQ06203 517 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 NFIAQ12857 509 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 CRHR2Q13324 411 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 PPIL2Q13356 520 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 TAF1CQ15572 869 aaPredicted RBP11.52□□□□□ -0.57
YBX3-218ENST00000546298 CCDC158Q5M9N0 1113 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 ZSCAN29Q8IWY8 852 aaPredicted RBP11.52□□□□□ -0.57
YBX3-218ENST00000546298 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 ZKSCAN4Q969J2 545 aaPredicted RBP11.52□□□□□ -0.57
YBX3-218ENST00000546298 PTPN18Q99952 460 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 ZCCHC17Q9NP64 241 aaKnown RBP11.52□□□□□ -0.57
YBX3-218ENST00000546298 HMG20BQ9P0W2 317 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 FAM198AQ9UFP1 575 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 ZNF112Q9UJU3 913 aa11.52□□□□□ -0.57
YBX3-218ENST00000546298 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 CASP8AP2Q9UKL3 1982 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 GPR75-ASB3A0A0A6YYF3 556 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 IGSF3O75054 1194 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 ARID4AP29374 1257 aaPredicted RBP11.51□□□□□ -0.57
YBX3-218ENST00000546298 BTDP43251 543 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 RGS3P49796 1198 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 SP3Q02447 781 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 RAI14Q9P0K7 980 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 LRP2BPQ9P2M1 347 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 NOP58Q9Y2X3 529 aaKnown RBP11.51□□□□□ -0.57
YBX3-218ENST00000546298 TRIM17Q9Y577 477 aa11.51□□□□□ -0.57
YBX3-218ENST00000546298 IRF6O14896 467 aa11.5□□□□□ -0.57
YBX3-218ENST00000546298 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
YBX3-218ENST00000546298 INPP5BP32019 993 aa11.5□□□□□ -0.57
YBX3-218ENST00000546298 MECOMQ03112 1051 aa11.5□□□□□ -0.57
YBX3-218ENST00000546298 TNNI3KQ59H18 835 aa11.5□□□□□ -0.57
YBX3-218ENST00000546298 TTC39AQ5SRH9 613 aa11.5□□□□□ -0.57
YBX3-218ENST00000546298 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
YBX3-218ENST00000546298 NOL10Q9BSC4 688 aaKnown RBP11.5□□□□□ -0.57
YBX3-218ENST00000546298 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
YBX3-218ENST00000546298 FPGT-TNNI3KV9GXZ4 949 aa11.5□□□□□ -0.57
YBX3-218ENST00000546298 MROH7-TTC4A0A0A0MT08 1334 aa11.5□□□□□ -0.57
YBX3-218ENST00000546298 RLBP1P12271 317 aa11.49□□□□□ -0.57
YBX3-218ENST00000546298 SOX10P56693 466 aa11.49□□□□□ -0.57
YBX3-218ENST00000546298 TBC1D9Q6ZT07 1266 aa11.49□□□□□ -0.57
YBX3-218ENST00000546298 OTOP1Q7RTM1 612 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms