RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 USP50Q70EL3 339 aaPredicted RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 SAMD7Q7Z3H4 446 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 DZIP1Q86YF9 867 aaKnown RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 MICALL2Q8IY33 904 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 RUFY2Q8WXA3 655 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 FAM227BQ96M60 508 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 SEC62Q99442 399 aaKnown RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 IDI2Q9BXS1 227 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 TAF1DQ9H5J8 278 aaPredicted RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 RRAGCQ9HB90 399 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 HACL1Q9UJ83 578 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 PCDHAC2Q9Y5I4 1007 aa7.07□□□□□ -1.28
ABCF1-207ENST00000542772 RPAP1Q9BWH6 1393 aaPredicted RBP7.07□□□□□ -1.28
ABCF1-207ENST00000542772 A0A0D9SFI3 127 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 MAGEB6P1A0A0J9YX57 407 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 GSG1L2A8MUP6 293 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 M0R2C6 588 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 CDC45O75419 566 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 PLCG2P16885 1265 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 GNAT2P19087 354 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 LMOD1P29536 600 aaPredicted RBP7.06□□□□□ -1.28
ABCF1-207ENST00000542772 EPHX2P34913 555 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 BTDP43251 543 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 DYNLL1P63167 89 aaKnown RBP7.06□□□□□ -1.28
ABCF1-207ENST00000542772 ALX1Q15699 326 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 SPDYE2Q495Y8 402 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 GIMAP6Q6P9H5 292 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 CWC27Q6UX04 472 aaKnown RBP7.06□□□□□ -1.28
ABCF1-207ENST00000542772 FAM83AQ86UY5 434 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 PNMA8AQ86V59 439 aaPredicted RBP7.06□□□□□ -1.28
ABCF1-207ENST00000542772 ESYT1Q9BSJ8 1104 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 IL25Q9H293 177 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 TDRD3Q9H7E2 651 aaKnown RBP7.06□□□□□ -1.28
ABCF1-207ENST00000542772 DIAPH3Q9NSV4 1193 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 ATP8A2Q9NTI2 1148 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 USP40Q9NVE5 1235 aa7.06□□□□□ -1.28
ABCF1-207ENST00000542772 AATFQ9NY61 560 aaKnown RBP eCLIP7.06□□□□□ -1.28
ABCF1-207ENST00000542772 ZNF70Q9UC06 446 aaPredicted RBP7.06□□□□□ -1.28
ABCF1-207ENST00000542772 MAST2Q6P0Q8 1798 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 RAD50Q92878 1312 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 PITPNM2Q9BZ72 1349 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 FOXP2O15409 715 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 GPAA1O43292 621 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 ENTPD3O75355 529 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 WDHD1O75717 1129 aaPredicted RBP7.05□□□□□ -1.28
ABCF1-207ENST00000542772 HSPD1P10809 573 aaKnown RBP7.05□□□□□ -1.28
ABCF1-207ENST00000542772 RBM5P52756 815 aaKnown RBP eCLIP7.05□□□□□ -1.288e-7■□□□□ 8.3
ABCF1-207ENST00000542772 MFAP1P55081 439 aaKnown RBP7.05□□□□□ -1.28
ABCF1-207ENST00000542772 MAP3K10Q02779 954 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 KIF4BQ2VIQ3 1234 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 C8orf34Q49A92 452 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 TBC1D10BQ4KMP7 808 aaPredicted RBP7.05□□□□□ -1.28
ABCF1-207ENST00000542772 SBK1Q52WX2 424 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 RBM26Q5T8P6 1007 aaKnown RBP7.05□□□□□ -1.28
ABCF1-207ENST00000542772 ZNF589Q86UQ0 364 aaPredicted RBP7.05□□□□□ -1.28
ABCF1-207ENST00000542772 LCORLQ8N3X6 602 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 TRPM4Q8TD43 1214 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 SH3RF3Q8TEJ3 882 aaPredicted RBP7.05□□□□□ -1.28
ABCF1-207ENST00000542772 MAP4K1Q92918 833 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 AIDAQ96BJ3 306 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 ARMT1Q9H993 441 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 FAM198AQ9UFP1 575 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 POLR2AP24928 1970 aaKnown RBP7.05□□□□□ -1.28
ABCF1-207ENST00000542772 ECM29Q5VYK3 1845 aa7.05□□□□□ -1.28
ABCF1-207ENST00000542772 PRKAB2O43741 272 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 MYO1BO43795 1136 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 EIF5BO60841 1220 aaKnown RBP7.04□□□□□ -1.28
ABCF1-207ENST00000542772 FGAP02671 866 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 NECTIN1Q15223 517 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 CASC1Q6TDU7 716 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 CCDC129Q6ZRS4 1044 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 METTL16Q86W50 562 aaKnown RBP7.04□□□□□ -1.28
ABCF1-207ENST00000542772 IFNL3Q8IZI9 196 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 MIGA1Q8NAN2 632 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 TGFBRAP1Q8WUH2 860 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 FAM151AQ8WW52 585 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 NOL10Q9BSC4 688 aaKnown RBP7.04□□□□□ -1.28
ABCF1-207ENST00000542772 DSCC1Q9BVC3 393 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 USP26Q9BXU7 913 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 CRNKL1Q9BZJ0 848 aaKnown RBP7.04□□□□□ -1.28
ABCF1-207ENST00000542772 LSG1Q9H089 658 aaKnown RBP7.04□□□□□ -1.28
ABCF1-207ENST00000542772 DCP1AQ9NPI6 582 aaPredicted RBP7.04□□□□□ -1.28
ABCF1-207ENST00000542772 TAOK2Q9UL54 1235 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 CDK5RAP2Q96SN8 1893 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 FOCADQ5VW36 1801 aa7.04□□□□□ -1.28
ABCF1-207ENST00000542772 ZMYM6O95789 1325 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 CCDC171Q6TFL3 1326 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 ADAMTSL1Q8N6G6 1762 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 KIF3CO14782 793 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 TBC1D12O60347 775 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 MBD4O95243 580 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 SEC24BO95487 1268 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 FGRP09769 529 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 PTH1RQ03431 593 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 NFIAQ12857 509 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 TSGA10IPQ3SY00 556 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 VPS53Q5VIR6 699 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 FOXP4Q8IVH2 680 aaPredicted RBP7.03□□□□□ -1.28
ABCF1-207ENST00000542772 ZFPM1Q8IX07 1006 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 TEX11Q8IYF3 940 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms