RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MTA3Q9BTC8 594 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 ANO10Q9NW15 660 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 PCDHA7Q9UN72 937 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 STK36Q9NRP7 1315 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 MYH14Q7Z406 1995 aaKnown RBP7.62□□□□□ -1.19
PTPRO-208ENST00000542557 UQCRHLA0A096LP55 91 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 LOC102724428A0A0B4J2F2 783 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 RAD21O60216 631 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 UQCRHP07919 91 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 GNAT2P19087 354 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 LIFRP42702 1097 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 SIK1P57059 783 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 STK38Q15208 465 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 APOA5Q6Q788 366 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 CNNM2Q9H8M5 875 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 NEDD4P46934 1319 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 DYNC1I1O14576 645 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 RGL2O15211 777 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 IGHMBP2P38935 993 aaKnown RBP7.62□□□□□ -1.19
PTPRO-208ENST00000542557 IGDCC4Q8TDY8 1250 aa7.62□□□□□ -1.19
PTPRO-208ENST00000542557 EPB41L4AQ9HCS5 686 aaPredicted RBP7.62□□□□□ -1.19
PTPRO-208ENST00000542557 KAT6BQ8WYB5 2073 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 SCN7AQ01118 1682 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 B4E1Z4 1266 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 GOLGA6L19H0YKK7 550 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 SPTLC2O15270 562 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 MBD4O95243 580 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 APPP05067 770 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 ATP6V1AP38606 617 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 IFNL3Q8IZI9 196 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 MAGEB6Q8N7X4 407 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 SPC24Q8NBT2 197 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 MRFAP1L1Q96HT8 127 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 TRIM5Q9C035 493 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 KRT23Q9C075 422 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 NAPBQ9H115 298 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 LY9Q9HBG7 655 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 CLIC4Q9Y696 253 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 KIF28PB7ZC32 967 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 ZBTB43O43298 467 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 RCAN1P53805 252 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 SF3A1Q15459 793 aaKnown RBP7.61□□□□□ -1.19
PTPRO-208ENST00000542557 NTRK3Q16288 839 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 ANO1Q5XXA6 986 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 OTUD7BQ6GQQ9 843 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 SYNE3Q6ZMZ3 975 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 BARGINQ6ZT62 677 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 C11orf57Q6ZUT1 292 aaPredicted RBP7.61□□□□□ -1.19
PTPRO-208ENST00000542557 CEP57L1Q8IYX8 460 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 MPNDQ8N594 471 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 HELBQ8NG08 1087 aaPredicted RBP7.61□□□□□ -1.19
PTPRO-208ENST00000542557 SMARCC1Q92922 1105 aaPredicted RBP7.61□□□□□ -1.19
PTPRO-208ENST00000542557 CDC5LQ99459 802 aaKnown RBP7.61□□□□□ -1.19
PTPRO-208ENST00000542557 ZNF652Q9Y2D9 606 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 CASZ1Q86V15 1759 aa7.61□□□□□ -1.19
PTPRO-208ENST00000542557 SPATA31A5Q5VU36 1347 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 SPATA31A7Q8IWB4 1347 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 PPFIA3O75145 1194 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 ITPK1Q13572 414 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 AKNAD1Q5T1N1 836 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 MARCH10Q8NA82 808 aaPredicted RBP7.6□□□□□ -1.19
PTPRO-208ENST00000542557 MYRIPQ8NFW9 859 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 STAG1Q8WVM7 1258 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 BPIFA3Q9BQP9 254 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 ALG1Q9BT22 464 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 NACAP1Q9BZK3 213 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 NAT10Q9H0A0 1025 aaKnown RBP7.6□□□□□ -1.19
PTPRO-208ENST00000542557 SEC31BQ9NQW1 1179 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 DENND2AQ9ULE3 1009 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 PYCARDQ9ULZ3 195 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 ZNF804BA4D1E1 1349 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 FAM237AA0A1B0GTK4 181 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 GOLGA8AA7E2F4 631 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 GSG1L2A8MUP6 293 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 PPP6R2O75170 966 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 POLR3DP05423 398 aaPredicted RBP7.6□□□□□ -1.19
PTPRO-208ENST00000542557 PTGS1P23219 599 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 CMA1P23946 247 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 GTF2F1P35269 517 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTPRO-208ENST00000542557 NDUFA8P51970 172 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 SLC39A14Q15043 492 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 TMEM67Q5HYA8 995 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 AXDND1Q5T1B0 1012 aaPredicted RBP7.6□□□□□ -1.19
PTPRO-208ENST00000542557 CLEC4GQ6UXB4 293 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 VPS37DQ86XT2 251 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 NKX2-3Q8TAU0 364 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 TIGD1Q96MW7 591 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 NIP7Q9Y221 180 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTPRO-208ENST00000542557 LTBP4Q8N2S1 1624 aa7.6□□□□□ -1.19
PTPRO-208ENST00000542557 U2AF2P26368 475 aaKnown RBP eCLIP7.59□□□□□ -1.19
PTPRO-208ENST00000542557 CDC27P30260 824 aa7.59□□□□□ -1.19
PTPRO-208ENST00000542557 HSP90AA2PQ14568 343 aaPredicted RBP7.59□□□□□ -1.19
PTPRO-208ENST00000542557 DNTTIP2Q5QJE6 756 aaKnown RBP7.59□□□□□ -1.19
PTPRO-208ENST00000542557 KRT40Q6A162 431 aa7.59□□□□□ -1.19
PTPRO-208ENST00000542557 CCDC186Q7Z3E2 898 aa7.59□□□□□ -1.19
PTPRO-208ENST00000542557 MICU3Q86XE3 530 aa7.59□□□□□ -1.19
PTPRO-208ENST00000542557 RAB11FIP4Q86YS3 637 aa7.59□□□□□ -1.19
PTPRO-208ENST00000542557 DHX40Q8IX18 779 aaKnown RBP7.59□□□□□ -1.19
PTPRO-208ENST00000542557 JMYQ8N9B5 988 aa7.59□□□□□ -1.19
PTPRO-208ENST00000542557 WASF1Q92558 559 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms