RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 MFSD14CQ5VZR4 134 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 CCDC174Q6PII3 467 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 SIL1Q9H173 461 aa9.32□□□□□ -0.92
GNE-205ENST00000539815 U2AF1L4Q8WU68 220 aaKnown RBP9.31□□□□□ -0.92
GNE-205ENST00000539815 PPM1EQ8WY54 764 aa9.31□□□□□ -0.92
GNE-205ENST00000539815 TMEM39BQ9GZU3 492 aa9.31□□□□□ -0.92
GNE-205ENST00000539815 GRM8O00222 908 aa9.31□□□□□ -0.92
GNE-205ENST00000539815 GJB1P08034 283 aa9.31□□□□□ -0.92
GNE-205ENST00000539815 UBTFL1P0CB47 393 aaPredicted RBP9.31□□□□□ -0.92
GNE-205ENST00000539815 CYP2B6P20813 491 aa9.31□□□□□ -0.92
GNE-205ENST00000539815 ATP2B2Q01814 1243 aa9.31□□□□□ -0.92
GNE-205ENST00000539815 G3BP1Q13283 466 aaKnown RBP eCLIP9.31□□□□□ -0.92
GNE-205ENST00000539815 DEFB123Q8N688 67 aa9.31□□□□□ -0.92
GNE-205ENST00000539815 TAF1LQ8IZX4 1826 aa9.31□□□□□ -0.92
GNE-205ENST00000539815 SERPINA10Q9UK55 444 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 SCN4AP35499 1836 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 FAM155AB1AL88 458 aaPredicted RBP9.3□□□□□ -0.92
GNE-205ENST00000539815 ZKSCAN1P17029 563 aaPredicted RBP9.3□□□□□ -0.92
GNE-205ENST00000539815 VGLL4Q14135 290 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 ZNF697Q5TEC3 545 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 FTSJ3Q8IY81 847 aaKnown RBP9.3□□□□□ -0.92
GNE-205ENST00000539815 FAM161BQ96MY7 647 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 CRBNQ96SW2 442 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 SPC25Q9HBM1 224 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
GNE-205ENST00000539815 LACTBP83111 547 aaPredicted RBP9.3□□□□□ -0.92
GNE-205ENST00000539815 DPP9Q86TI2 863 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 ZKSCAN4Q969J2 545 aaPredicted RBP9.3□□□□□ -0.92
GNE-205ENST00000539815 TUBGCP6Q96RT7 1819 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 ARFGEF1Q9Y6D6 1849 aa9.3□□□□□ -0.92
GNE-205ENST00000539815 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 CDK11BP21127 795 aaKnown RBP9.29□□□□□ -0.92
GNE-205ENST00000539815 FLT3LGP49771 235 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 NUDT12Q9BQG2 462 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 WTIPA6NIX2 430 aaPredicted RBP9.29□□□□□ -0.92
GNE-205ENST00000539815 PPATQ06203 517 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 PPIL2Q13356 520 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 PLS1Q14651 629 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 STAP2Q9UGK3 403 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 VGLL3A8MV65 326 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 KBTBD13C9JR72 458 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 F6X3S4 739 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 LDLRAD1Q5T700 205 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 TEX2Q8IWB9 1127 aa9.29□□□□□ -0.92
GNE-205ENST00000539815 ZNF594Q96JF6 807 aaPredicted RBP9.29□□□□□ -0.92
GNE-205ENST00000539815 ZNF830Q96NB3 372 aaPredicted RBP9.29□□□□□ -0.92
GNE-205ENST00000539815 MROH5Q6ZUA9 1318 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 MPHOSPH10O00566 681 aaKnown RBP9.28□□□□□ -0.92
GNE-205ENST00000539815 ATP2B3Q16720 1220 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 ARMC5Q96C12 935 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 PAWRQ96IZ0 340 aaKnown RBP9.28□□□□□ -0.92
GNE-205ENST00000539815 DENND2AQ9ULE3 1009 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 AKAP2Q9Y2D5 859 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 PKD1L3Q7Z443 1732 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 CXCL11O14625 94 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 CAPN2P17655 700 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 USP5P45974 858 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 BTBD19C9JJ37 291 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 IRF6O14896 467 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 PLCG2P16885 1265 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 SYN1P17600 705 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 GCLCP48506 637 aaPredicted RBP9.28□□□□□ -0.92
GNE-205ENST00000539815 BRI3BPQ8WY22 251 aa9.28□□□□□ -0.92
GNE-205ENST00000539815 PTPRZ1P23471 2315 aaPredicted RBP9.28□□□□□ -0.92
GNE-205ENST00000539815 CEP350Q5VT06 3117 aa9.27□□□□□ -0.92
GNE-205ENST00000539815 ATN1P54259 1190 aaPredicted RBP9.27□□□□□ -0.92
GNE-205ENST00000539815 ANKRD13CQ8N6S4 541 aa9.27□□□□□ -0.92
GNE-205ENST00000539815 SYMPKQ92797 1274 aaKnown RBP9.27□□□□□ -0.92
GNE-205ENST00000539815 BCCIPQ9P287 314 aaKnown RBP eCLIP9.27□□□□□ -0.92
GNE-205ENST00000539815 RBM27Q9P2N5 1060 aaKnown RBP9.27□□□□□ -0.92
GNE-205ENST00000539815 RTL9Q8NET4 1388 aa9.27□□□□□ -0.93
GNE-205ENST00000539815 SPDYE5A6NIY4 337 aa9.27□□□□□ -0.93
GNE-205ENST00000539815 SNAP23O00161 211 aa9.27□□□□□ -0.93
GNE-205ENST00000539815 ALDH1L1O75891 902 aa9.27□□□□□ -0.93
GNE-205ENST00000539815 IKQ13123 557 aaPredicted RBP9.27□□□□□ -0.93
GNE-205ENST00000539815 C8orf58Q8NAV2 365 aa9.27□□□□□ -0.93
GNE-205ENST00000539815 INHAP05111 366 aa9.27□□□□□ -0.93
GNE-205ENST00000539815 ELNP15502 786 aa9.27□□□□□ -0.93
GNE-205ENST00000539815 PUM3Q15397 648 aaKnown RBP9.27□□□□□ -0.93
GNE-205ENST00000539815 CCDC158Q5M9N0 1113 aa9.27□□□□□ -0.93
GNE-205ENST00000539815 CCDC88AQ3V6T2 1871 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 USP2O75604 605 aaPredicted RBP9.26□□□□□ -0.93
GNE-205ENST00000539815 HSP90AA1P07900 732 aaKnown RBP9.26□□□□□ -0.93
GNE-205ENST00000539815 SPP2Q13103 211 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 MTFR1Q15390 333 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 SPDYE2Q495Y8 402 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 RIC1Q4ADV7 1423 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 POLR3DP05423 398 aaPredicted RBP9.26□□□□□ -0.93
GNE-205ENST00000539815 EXOSC9Q06265 439 aaKnown RBP9.26□□□□□ -0.93
GNE-205ENST00000539815 GAS2L1Q99501 681 aaPredicted RBP9.26□□□□□ -0.93
GNE-205ENST00000539815 ATP11BQ9Y2G3 1177 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 IPO8O15397 1037 aaKnown RBP9.26□□□□□ -0.93
GNE-205ENST00000539815 SGPL1O95470 568 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 HDLBPQ00341 1268 aaKnown RBP9.26□□□□□ -0.93
GNE-205ENST00000539815 MVPQ14764 893 aaKnown RBP9.26□□□□□ -0.93
GNE-205ENST00000539815 PDIA6Q15084 440 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 TEX11Q8IYF3 940 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 FAM43AQ8N2R8 423 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 ARRDC4Q8NCT1 418 aa9.26□□□□□ -0.93
GNE-205ENST00000539815 FAM151AQ8WW52 585 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms