RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 NFAT5O94916 1531 aa5.78□□□□□ -1.48
SNHG1-208ENST00000538266 CPDO75976 1380 aa5.78□□□□□ -1.48
SNHG1-208ENST00000538266 KIAA0232Q92628 1395 aa5.78□□□□□ -1.48
SNHG1-208ENST00000538266 LTN1O94822 1766 aa5.78□□□□□ -1.48
SNHG1-208ENST00000538266 COL14A1Q05707 1796 aaKnown RBP5.78□□□□□ -1.48
SNHG1-208ENST00000538266 H3BRB1 525 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 PPM1GO15355 546 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-208ENST00000538266 MAP2K3P46734 347 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 AMPHP49418 695 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 DNM1Q05193 864 aaKnown RBP5.77□□□□□ -1.49
SNHG1-208ENST00000538266 SPEM2Q0P670 501 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 CCINQ13939 588 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 CHRNA2Q15822 529 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 SLC30A3Q99726 388 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 GSX2Q9BZM3 304 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 TUT1Q9H6E5 874 aaKnown RBP5.77□□□□□ -1.49
SNHG1-208ENST00000538266 C11orf16Q9NQ32 467 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 ABCC6O95255 1503 aa5.77□□□□□ -1.49
SNHG1-208ENST00000538266 PLCH1Q4KWH8 1693 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 SMG6Q86US8 1419 aaKnown RBP5.76□□□□□ -1.49
SNHG1-208ENST00000538266 SOWAHDA6NJG2 315 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 ANP32CO43423 234 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 WIPF1O43516 503 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 XYLBO75191 536 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 SASH3O75995 380 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 GRNP28799 593 aaKnown RBP5.76□□□□□ -1.49
SNHG1-208ENST00000538266 EVA1CP58658 441 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 RRS1Q15050 365 aaKnown RBP5.76□□□□□ -1.49
SNHG1-208ENST00000538266 RALBP1Q15311 655 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 ECM1Q16610 540 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 TTC16Q8NEE8 873 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 EDEM1Q92611 657 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 BHMTQ93088 406 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 BIN2Q9UBW5 565 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-208ENST00000538266 FNDC3AQ9Y2H6 1198 aaKnown RBP5.76□□□□□ -1.49
SNHG1-208ENST00000538266 RTL1A6NKG5 1358 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 FLT4P35916 1363 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 KIF24Q5T7B8 1368 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 AATKQ6ZMQ8 1374 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 NWD2Q9ULI1 1742 aa5.76□□□□□ -1.49
SNHG1-208ENST00000538266 MAP3K19Q56UN5 1328 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 BLMP54132 1417 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-208ENST00000538266 FAM83GA6ND36 823 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 SLURP2P0DP57 97 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 PCSK2P16519 638 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 TARSP26639 723 aaKnown RBP5.75□□□□□ -1.49
SNHG1-208ENST00000538266 PCBP4P57723 403 aaKnown RBP5.75□□□□□ -1.49
SNHG1-208ENST00000538266 ZNF772Q68DY9 489 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-208ENST00000538266 KRT25Q7Z3Z0 450 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 ARHGEF25Q86VW2 580 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 CFAP53Q96M91 514 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 PNMA5Q96PV4 448 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 OXCT2Q9BYC2 517 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-208ENST00000538266 BTG4Q9NY30 223 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 USP21Q9UK80 565 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 CCDC9Q9Y3X0 531 aaKnown RBP5.75□□□□□ -1.49
SNHG1-208ENST00000538266 KCNMB2Q9Y691 235 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 PARD3Q8TEW0 1356 aa5.75□□□□□ -1.49
SNHG1-208ENST00000538266 CDK12Q9NYV4 1490 aaPredicted RBP5.75□□□□□ -1.49
SNHG1-208ENST00000538266 AFF2P51816 1311 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 MAP2P11137 1827 aaKnown RBP5.74□□□□□ -1.49
SNHG1-208ENST00000538266 FZD6O60353 706 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 RPLP1P05386 114 aaKnown RBP5.74□□□□□ -1.49
SNHG1-208ENST00000538266 ARAFP10398 606 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 FBLN1P23142 703 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 MZF1P28698 734 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-208ENST00000538266 C8orf34Q49A92 452 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 ZNF468Q5VIY5 522 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-208ENST00000538266 RAB44Q7Z6P3 723 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-208ENST00000538266 SYT9Q86SS6 491 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 IP6K1Q92551 441 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 ACDQ96AP0 544 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 IGFLR1Q9H665 355 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 EFCC1Q9HA90 598 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 CCDC87Q9NVE4 849 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 POLKQ9UBT6 870 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 KLF15Q9UIH9 416 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 GGA1Q9UJY5 639 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 BRPF3Q9ULD4 1205 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 POLIQ9UNA4 740 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-208ENST00000538266 COL5A2P05997 1499 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-208ENST00000538266 LMO7Q8WWI1 1683 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.74□□□□□ -1.49
SNHG1-208ENST00000538266 SLIT2O94813 1529 aa5.74□□□□□ -1.49
SNHG1-208ENST00000538266 MYBBP1AQ9BQG0 1328 aaKnown RBP5.74□□□□□ -1.49
SNHG1-208ENST00000538266 FAM208AQ9UK61 1670 aaKnown RBP5.73□□□□□ -1.49
SNHG1-208ENST00000538266 CAMTA1Q9Y6Y1 1673 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 INSRP06213 1382 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 NEURL1BA8MQ27 555 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 EGFRP00533 1210 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 PDGFAP04085 211 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 ADH6P28332 368 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 PPP2R1AP30153 589 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 HOXC9P31274 260 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 MTHFSP49914 203 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 ARHGAP4P98171 946 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 LYPD4Q6UWN0 246 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 TOM1L2Q6ZVM7 507 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 UNC5CLQ8IV45 518 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 265.4 ms