RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 BECN2A8MW95 431 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 ZBTB43O43298 467 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 PPFIA3O75145 1194 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 POLR3DP05423 398 aaPredicted RBP21.81■■□□□ 1.08
COPS7A-204ENST00000534947 CMA1P23946 247 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 RASGRF1Q13972 1273 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 OTUD7BQ6GQQ9 843 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 IFNL3Q8IZI9 196 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 SDF4Q9BRK5 362 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 ALG1Q9BT22 464 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 KRT23Q9C075 422 aa21.81■■□□□ 1.08
COPS7A-204ENST00000534947 B4E1Z4 1266 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 CAMTA2O94983 1202 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 SLC39A14Q15043 492 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 TIGD1Q96MW7 591 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 NAPBQ9H115 298 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 LY9Q9HBG7 655 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 NEDD4P46934 1319 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 PPP6R2O75170 966 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 CRKLP46109 303 aaKnown RBP21.8■■□□□ 1.08
COPS7A-204ENST00000534947 NDUFA8P51970 172 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 CHAF1AQ13111 956 aaPredicted RBP21.8■■□□□ 1.08
COPS7A-204ENST00000534947 DHX40Q8IX18 779 aaKnown RBP21.8■■□□□ 1.08
COPS7A-204ENST00000534947 C17orf53Q8N3J3 647 aaPredicted RBP21.8■■□□□ 1.08
COPS7A-204ENST00000534947 JMYQ8N9B5 988 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 KIAA1468Q9P260 1216 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 ZNF831Q5JPB2 1677 aa21.8■■□□□ 1.08
COPS7A-204ENST00000534947 SPATA31A1Q5TZJ5 1347 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 KIF28PB7ZC32 967 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 IGHMBP2P38935 993 aaKnown RBP21.79■■□□□ 1.08
COPS7A-204ENST00000534947 RCAN1P53805 252 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 MAGEB6Q8N7X4 407 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 NACAP1Q9BZK3 213 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 EPB41L4AQ9HCS5 686 aaPredicted RBP21.79■■□□□ 1.08
COPS7A-204ENST00000534947 A0A1B0GVL5 298 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 MBD4O95243 580 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 RBM6P78332 1123 aaKnown RBP21.79■■□□□ 1.08
COPS7A-204ENST00000534947 NTRK3Q16288 839 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 TMEM67Q5HYA8 995 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 AXDND1Q5T1B0 1012 aaPredicted RBP21.79■■□□□ 1.08
COPS7A-204ENST00000534947 AKNAD1Q5T1N1 836 aa21.79■■□□□ 1.08
COPS7A-204ENST00000534947 U2AF2P26368 475 aaKnown RBP eCLIP21.78■■□□□ 1.08
COPS7A-204ENST00000534947 ZRSR1Q15695 479 aaKnown RBP21.78■■□□□ 1.08
COPS7A-204ENST00000534947 DDB1Q16531 1140 aa21.78■■□□□ 1.08
COPS7A-204ENST00000534947 KRT40Q6A162 431 aa21.78■■□□□ 1.08
COPS7A-204ENST00000534947 VPS37DQ86XT2 251 aa21.78■■□□□ 1.08
COPS7A-204ENST00000534947 HELBQ8NG08 1087 aaPredicted RBP21.78■■□□□ 1.08
COPS7A-204ENST00000534947 WASF1Q92558 559 aa21.78■■□□□ 1.08
COPS7A-204ENST00000534947 FAM237AA0A1B0GTK4 181 aa21.77■■□□□ 1.08
COPS7A-204ENST00000534947 GOLGA8AA7E2F4 631 aa21.77■■□□□ 1.08
COPS7A-204ENST00000534947 IARSP41252 1262 aaKnown RBP21.77■■□□□ 1.08
COPS7A-204ENST00000534947 STAG1Q8WVM7 1258 aa21.77■■□□□ 1.08
COPS7A-204ENST00000534947 LOC102724428A0A0B4J2F2 783 aa21.77■■□□□ 1.07
COPS7A-204ENST00000534947 GSG1L2A8MUP6 293 aa21.77■■□□□ 1.07
COPS7A-204ENST00000534947 NTSR2O95665 410 aa21.77■■□□□ 1.07
COPS7A-204ENST00000534947 ATP6V1AP38606 617 aa21.77■■□□□ 1.07
COPS7A-204ENST00000534947 SIK1P57059 783 aa21.77■■□□□ 1.07
COPS7A-204ENST00000534947 TRIM29Q14134 588 aa21.77■■□□□ 1.07
COPS7A-204ENST00000534947 NFXL1Q6ZNB6 911 aa21.77■■□□□ 1.07
COPS7A-204ENST00000534947 DENND2AQ9ULE3 1009 aa21.77■■□□□ 1.07
COPS7A-204ENST00000534947 ZNF202O95125 648 aa21.76■■□□□ 1.07
COPS7A-204ENST00000534947 CDC27P30260 824 aa21.76■■□□□ 1.07
COPS7A-204ENST00000534947 CDC5LQ99459 802 aaKnown RBP21.76■■□□□ 1.07
COPS7A-204ENST00000534947 SLC12A7Q9Y666 1083 aa21.76■■□□□ 1.07
COPS7A-204ENST00000534947 BCL9LQ86UU0 1499 aa21.76■■□□□ 1.07
COPS7A-204ENST00000534947 MYH14Q7Z406 1995 aaKnown RBP21.76■■□□□ 1.07
COPS7A-204ENST00000534947 RGL2O15211 777 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 DHX8Q14562 1220 aaKnown RBP21.75■■□□□ 1.07
COPS7A-204ENST00000534947 SART3Q15020 963 aaKnown RBP21.75■■□□□ 1.07
COPS7A-204ENST00000534947 MFSD6Q6ZSS7 791 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 MICU3Q86XE3 530 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 RAB11FIP4Q86YS3 637 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 TMTC2Q8N394 836 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.75■■□□□ 1.07
COPS7A-204ENST00000534947 FAM217BQ9NTX9 383 aaPredicted RBP21.75■■□□□ 1.07
COPS7A-204ENST00000534947 NRBP1Q9UHY1 535 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 ZNF652Q9Y2D9 606 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 COL5A3P25940 1745 aaPredicted RBP21.75■■□□□ 1.07
COPS7A-204ENST00000534947 CCDC69A6NI79 296 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 SLC3A2P08195 630 aaKnown RBP21.75■■□□□ 1.07
COPS7A-204ENST00000534947 IFNAR1P17181 557 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 GLIPR1L2Q4G1C9 344 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 RNF41Q9H4P4 317 aaPredicted RBP21.75■■□□□ 1.07
COPS7A-204ENST00000534947 SEC31BQ9NQW1 1179 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 ZSWIM5Q9P217 1185 aa21.75■■□□□ 1.07
COPS7A-204ENST00000534947 IFIT3O14879 490 aaKnown RBP21.74■■□□□ 1.07
COPS7A-204ENST00000534947 FMNL1O95466 1100 aaPredicted RBP21.74■■□□□ 1.07
COPS7A-204ENST00000534947 SSRP1Q08945 709 aaKnown RBP21.74■■□□□ 1.07
COPS7A-204ENST00000534947 NKX2-3Q8TAU0 364 aa21.74■■□□□ 1.07
COPS7A-204ENST00000534947 SMARCC1Q92922 1105 aaPredicted RBP21.74■■□□□ 1.07
COPS7A-204ENST00000534947 ARMT1Q9H993 441 aa21.74■■□□□ 1.07
COPS7A-204ENST00000534947 A0A1B0GUL6 1792 aa21.74■■□□□ 1.07
COPS7A-204ENST00000534947 PFKFB1P16118 471 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 NLRP12P59046 1061 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 CLEC4GQ6UXB4 293 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 AOPEPQ8N6M6 819 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 GJB4Q9NTQ9 266 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 FAM13BQ9NYF5 915 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 HPSEQ9Y251 543 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 GNL2Q13823 731 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms