RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 SEZ6L2Q6UXD5 910 aa6.52□□□□□ -1.37
USP48-215ENST00000534705 WFDC3Q8IUB2 231 aa6.52□□□□□ -1.37
USP48-215ENST00000534705 GJD3Q8N144 294 aa6.52□□□□□ -1.37
USP48-215ENST00000534705 PI4K2BQ8TCG2 481 aa6.52□□□□□ -1.37
USP48-215ENST00000534705 GGNBP2Q9H3C7 697 aa6.52□□□□□ -1.37
USP48-215ENST00000534705 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
USP48-215ENST00000534705 SOWAHDA6NJG2 315 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 ASPAP45381 313 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 BNIP3Q12983 259 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 ECM1Q16610 540 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 NETO1Q8TDF5 533 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 TOX2Q96NM4 488 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 NRSN2Q9GZP1 204 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 GSX1Q9H4S2 264 aaPredicted RBP6.51□□□□□ -1.37
USP48-215ENST00000534705 ANO2Q9NQ90 1003 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 C1GALT1Q9NS00 363 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 FAM105AQ9NUU6 356 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 FAM53CQ9NYF3 392 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 POLIQ9UNA4 740 aa6.51□□□□□ -1.37
USP48-215ENST00000534705 PHACTR2O75167 634 aa6.5□□□□□ -1.37
USP48-215ENST00000534705 RNASE1P07998 156 aaKnown RBP6.5□□□□□ -1.37
USP48-215ENST00000534705 MAOBP27338 520 aa6.5□□□□□ -1.37
USP48-215ENST00000534705 ARHGAP4P98171 946 aa6.5□□□□□ -1.37
USP48-215ENST00000534705 POU4F3Q15319 338 aa6.5□□□□□ -1.37
USP48-215ENST00000534705 AKAP4Q5JQC9 854 aa6.5□□□□□ -1.37
USP48-215ENST00000534705 DDX54Q8TDD1 881 aaKnown RBP6.5□□□□□ -1.37
USP48-215ENST00000534705 EREGO14944 169 aa6.49□□□□□ -1.37
USP48-215ENST00000534705 CD8BP10966 210 aa6.49□□□□□ -1.37
USP48-215ENST00000534705 PRKCQQ04759 706 aa6.49□□□□□ -1.37
USP48-215ENST00000534705 MESP2Q0VG99 397 aa6.49□□□□□ -1.37
USP48-215ENST00000534705 ZSCAN18Q8TBC5 510 aaPredicted RBP6.49□□□□□ -1.37
USP48-215ENST00000534705 CITED4Q96RK1 184 aa6.49□□□□□ -1.37
USP48-215ENST00000534705 MBNL3Q9NUK0 354 aaKnown RBP6.49□□□□□ -1.37
USP48-215ENST00000534705 AP4E1Q9UPM8 1137 aa6.49□□□□□ -1.37
USP48-215ENST00000534705 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
USP48-215ENST00000534705 NDUFB5O43674 189 aa6.48□□□□□ -1.37
USP48-215ENST00000534705 AAMPQ13685 434 aa6.48□□□□□ -1.37
USP48-215ENST00000534705 SNX29Q8TEQ0 813 aa6.48□□□□□ -1.37
USP48-215ENST00000534705 BRPF3Q9ULD4 1205 aa6.48□□□□□ -1.37
USP48-215ENST00000534705 DAGLAQ9Y4D2 1042 aa6.48□□□□□ -1.37
USP48-215ENST00000534705 SYNGAP1Q96PV0 1343 aa6.48□□□□□ -1.37
USP48-215ENST00000534705 A6NHS1 94 aa6.47□□□□□ -1.37
USP48-215ENST00000534705 LRRC10BA6NIK2 292 aa6.47□□□□□ -1.37
USP48-215ENST00000534705 TNFRSF21O75509 655 aa6.47□□□□□ -1.37
USP48-215ENST00000534705 RAP1GAPP47736 663 aa6.47□□□□□ -1.37
USP48-215ENST00000534705 PCDH1Q08174 1060 aa6.47□□□□□ -1.37
USP48-215ENST00000534705 LRRN4CLQ8ND94 238 aa6.47□□□□□ -1.37
USP48-215ENST00000534705 CORO1BQ9BR76 489 aa6.47□□□□□ -1.37
USP48-215ENST00000534705 CLEC4MQ9H2X3 399 aaPredicted RBP6.47□□□□□ -1.37
USP48-215ENST00000534705 MKNK2Q9HBH9 465 aa6.47□□□□□ -1.37
USP48-215ENST00000534705 CCDC87Q9NVE4 849 aa6.47□□□□□ -1.37
USP48-215ENST00000534705 PDE3BQ13370 1112 aa6.46□□□□□ -1.38
USP48-215ENST00000534705 LILRA6Q6PI73 481 aa6.46□□□□□ -1.38
USP48-215ENST00000534705 SIAH1Q8IUQ4 282 aa6.46□□□□□ -1.38
USP48-215ENST00000534705 PLD6Q8N2A8 252 aaKnown RBP6.46□□□□□ -1.38
USP48-215ENST00000534705 PPP1R16BQ96T49 567 aa6.46□□□□□ -1.38
USP48-215ENST00000534705 FAM129BQ96TA1 746 aa6.46□□□□□ -1.38
USP48-215ENST00000534705 RBCK1Q9BYM8 510 aa6.46□□□□□ -1.38
USP48-215ENST00000534705 AMOTL2Q9Y2J4 779 aa6.46□□□□□ -1.38
USP48-215ENST00000534705 IVNS1ABPQ9Y6Y0 642 aa6.46□□□□□ -1.38
USP48-215ENST00000534705 A0A096LPE4 126 aa6.45□□□□□ -1.38
USP48-215ENST00000534705 A0A1W2PPZ6 126 aa6.45□□□□□ -1.38
USP48-215ENST00000534705 DYNC1LI2O43237 492 aaPredicted RBP6.45□□□□□ -1.38
USP48-215ENST00000534705 ZNF865P0CJ78 1059 aaPredicted RBP6.45□□□□□ -1.38
USP48-215ENST00000534705 PDIA4P13667 645 aaKnown RBP6.45□□□□□ -1.38
USP48-215ENST00000534705 IFI16Q16666 785 aaKnown RBP6.45□□□□□ -1.38
USP48-215ENST00000534705 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
USP48-215ENST00000534705 ADAMTS6Q9UKP5 1117 aa6.45□□□□□ -1.38
USP48-215ENST00000534705 NEFLP07196 543 aa6.44□□□□□ -1.38
USP48-215ENST00000534705 CTSBP07858 339 aa6.44□□□□□ -1.38
USP48-215ENST00000534705 ZNF423Q2M1K9 1284 aa6.44□□□□□ -1.38
USP48-215ENST00000534705 PEAR1Q5VY43 1037 aaPredicted RBP6.44□□□□□ -1.38
USP48-215ENST00000534705 SLC23A3Q6PIS1 610 aa6.44□□□□□ -1.38
USP48-215ENST00000534705 ARHGAP27Q6ZUM4 889 aa6.44□□□□□ -1.38
USP48-215ENST00000534705 FLAD1Q8NFF5 587 aa6.44□□□□□ -1.38
USP48-215ENST00000534705 HRASLS5Q96KN8 279 aa6.44□□□□□ -1.38
USP48-215ENST00000534705 LGR6Q9HBX8 967 aa6.44□□□□□ -1.38
USP48-215ENST00000534705 TMEM265A0A087WTH1 108 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 PRRG2O14669 202 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 AOC2O75106 756 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 FAM87AP0C7U9 286 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 CFPP27918 469 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 KCNMB1Q16558 191 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 AOC3Q16853 763 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 ANGEL2Q5VTE6 544 aaKnown RBP6.43□□□□□ -1.38
USP48-215ENST00000534705 ZSWIM9Q86XI8 627 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 CILP2Q8IUL8 1156 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 ALKBH8Q96BT7 664 aaKnown RBP6.43□□□□□ -1.38
USP48-215ENST00000534705 DMRTB1Q96MA1 342 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 DCTN4Q9UJW0 460 aa6.43□□□□□ -1.38
USP48-215ENST00000534705 METTL12A8MUP2 240 aa6.42□□□□□ -1.38
USP48-215ENST00000534705 TSPAN15O95858 294 aa6.42□□□□□ -1.38
USP48-215ENST00000534705 IGHA2P01877 340 aa6.42□□□□□ -1.38
USP48-215ENST00000534705 MLANAQ16655 118 aa6.42□□□□□ -1.38
USP48-215ENST00000534705 ANKLE2Q86XL3 938 aa6.42□□□□□ -1.38
USP48-215ENST00000534705 CCNJLQ8IV13 435 aa6.42□□□□□ -1.38
USP48-215ENST00000534705 LATS2Q9NRM7 1088 aa6.42□□□□□ -1.38
USP48-215ENST00000534705 NCANO14594 1321 aa6.42□□□□□ -1.38
USP48-215ENST00000534705 B8ZZF3 427 aa6.41□□□□□ -1.38
USP48-215ENST00000534705 HNRNPUQ00839 825 aaKnown RBP eCLIP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms