RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 NTSR2O95665 410 aa18.53■□□□□ 0.56
ATP2C1-224ENST00000533801 NAA16Q6N069 864 aaPredicted RBP18.53■□□□□ 0.56
ATP2C1-224ENST00000533801 APOA5Q6Q788 366 aa18.53■□□□□ 0.56
ATP2C1-224ENST00000533801 GLI3P10071 1580 aa18.53■□□□□ 0.56
ATP2C1-224ENST00000533801 UBE3CQ15386 1083 aa18.53■□□□□ 0.56
ATP2C1-224ENST00000533801 PARP10Q53GL7 1025 aa18.53■□□□□ 0.56
ATP2C1-224ENST00000533801 C11orf57Q6ZUT1 292 aaPredicted RBP18.53■□□□□ 0.56
ATP2C1-224ENST00000533801 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.56
ATP2C1-224ENST00000533801 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.52■□□□□ 0.56
ATP2C1-224ENST00000533801 ADGRA1Q86SQ6 560 aa18.52■□□□□ 0.56
ATP2C1-224ENST00000533801 TSC1Q92574 1164 aa18.52■□□□□ 0.56
ATP2C1-224ENST00000533801 ANKIB1Q9P2G1 1089 aa18.52■□□□□ 0.56
ATP2C1-224ENST00000533801 EP400Q96L91 3159 aa18.52■□□□□ 0.56
ATP2C1-224ENST00000533801 TOM1O60784 492 aa18.52■□□□□ 0.56
ATP2C1-224ENST00000533801 ILDR1Q86SU0 546 aaPredicted RBP18.52■□□□□ 0.56
ATP2C1-224ENST00000533801 CCNL1Q9UK58 526 aaPredicted RBP18.52■□□□□ 0.56
ATP2C1-224ENST00000533801 PATL2C9JE40 543 aaKnown RBP18.52■□□□□ 0.55
ATP2C1-224ENST00000533801 NDUFA8P51970 172 aa18.52■□□□□ 0.55
ATP2C1-224ENST00000533801 CCDC186Q7Z3E2 898 aa18.52■□□□□ 0.55
ATP2C1-224ENST00000533801 GNL3LQ9NVN8 582 aaKnown RBP18.52■□□□□ 0.55
ATP2C1-224ENST00000533801 AATFQ9NY61 560 aaKnown RBP eCLIP18.52■□□□□ 0.55
ATP2C1-224ENST00000533801 EVX2Q03828 476 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 LRMPQ12912 555 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 KRT40Q6A162 431 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 PDILTQ8N807 584 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 FBXO18Q8NFZ0 1043 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 CLIC6Q96NY7 704 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 SPTLC2O15270 562 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 WTAPQ15007 396 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 ELP1O95163 1332 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 LAMB4A4D0S4 1761 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 MAGEB6P1A0A0J9YX57 407 aa18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 SART3Q15020 963 aaKnown RBP18.51■□□□□ 0.55
ATP2C1-224ENST00000533801 GSG1L2A8MUP6 293 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 MYSM1Q5VVJ2 828 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 ARID4AP29374 1257 aaPredicted RBP18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 GUCY1A2P33402 732 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 PTPN21Q16825 1174 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 UVSSAQ2YD98 709 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 MRPS27Q92552 414 aaKnown RBP18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 FUCA2Q9BTY2 467 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 SPATA31A5Q5VU36 1347 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 SPATA31A7Q8IWB4 1347 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 SH2B2O14492 632 aaPredicted RBP18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 AKNAD1Q5T1N1 836 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 NLRP3Q96P20 1036 aa18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 CDCA7Q9BWT1 371 aaPredicted RBP18.5■□□□□ 0.55
ATP2C1-224ENST00000533801 AOPEPQ8N6M6 819 aa18.49■□□□□ 0.55
ATP2C1-224ENST00000533801 FGFR2P21802 821 aa18.49■□□□□ 0.55
ATP2C1-224ENST00000533801 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
ATP2C1-224ENST00000533801 SSRP1Q08945 709 aaKnown RBP18.49■□□□□ 0.55
ATP2C1-224ENST00000533801 TJP1Q07157 1748 aa18.49■□□□□ 0.55
ATP2C1-224ENST00000533801 FAM47AQ5JRC9 791 aa18.48■□□□□ 0.55
ATP2C1-224ENST00000533801 ZNF592Q92610 1267 aa18.48■□□□□ 0.55
ATP2C1-224ENST00000533801 UQCRHLA0A096LP55 91 aa18.48■□□□□ 0.55
ATP2C1-224ENST00000533801 UQCRHP07919 91 aa18.48■□□□□ 0.55
ATP2C1-224ENST00000533801 USP21Q9UK80 565 aa18.48■□□□□ 0.55
ATP2C1-224ENST00000533801 PYCARDQ9ULZ3 195 aa18.48■□□□□ 0.55
ATP2C1-224ENST00000533801 PDIA4P13667 645 aaKnown RBP18.48■□□□□ 0.55
ATP2C1-224ENST00000533801 TACC3Q9Y6A5 838 aa18.48■□□□□ 0.55
ATP2C1-224ENST00000533801 GOLGA6L6A8MZA4 724 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 RTN1Q16799 776 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 CLIP2Q9UDT6 1046 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 RCOR1Q9UKL0 485 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 TCRBV5S4A2TA0A5A2 114 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 BTBD18B2RXH4 712 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 OFD1O75665 1012 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 SMC2O95347 1197 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 RFC4P35249 363 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 FAM160A1Q05DH4 1040 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 TRIM22Q8IYM9 498 aa18.47■□□□□ 0.55
ATP2C1-224ENST00000533801 CDKL5O76039 1030 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 PRKCSHP14314 528 aaPredicted RBP18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 ANO1Q5XXA6 986 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 AMIGO3Q86WK7 504 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 AGXT2Q9BYV1 514 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 RTCBQ9Y3I0 505 aaKnown RBP18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 NMT2O60551 498 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 PRDX5P30044 214 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 KIF23Q02241 960 aaPredicted RBP18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 PPARAQ07869 468 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 SAFBQ15424 915 aaKnown RBP eCLIP18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 LY9Q9HBG7 655 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 ROBO1Q9Y6N7 1651 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 ABCC6O95255 1503 aa18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 RPS8P62241 208 aaKnown RBP18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 NOLC1Q14978 699 aaKnown RBP eCLIP18.46■□□□□ 0.55
ATP2C1-224ENST00000533801 ZMYM6O95789 1325 aa18.46■□□□□ 0.54
ATP2C1-224ENST00000533801 DISP2A7MBM2 1401 aa18.45■□□□□ 0.54
ATP2C1-224ENST00000533801 USP17L12C9JPN9 530 aa18.45■□□□□ 0.54
ATP2C1-224ENST00000533801 USP17L21D6R901 530 aa18.45■□□□□ 0.54
ATP2C1-224ENST00000533801 NR5A1Q13285 461 aa18.45■□□□□ 0.54
ATP2C1-224ENST00000533801 ARID5BQ14865 1188 aa18.45■□□□□ 0.54
ATP2C1-224ENST00000533801 LINC00301Q8NCQ3 95 aa18.45■□□□□ 0.54
ATP2C1-224ENST00000533801 TXNRD3Q86VQ6 643 aa18.45■□□□□ 0.54
ATP2C1-224ENST00000533801 ITGB4P16144 1822 aa18.45■□□□□ 0.54
ATP2C1-224ENST00000533801 NUP188Q5SRE5 1749 aa18.45■□□□□ 0.54
ATP2C1-224ENST00000533801 CYP2D6P10635 497 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms