RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TIGD1Q96MW7 591 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 ZSCAN16Q9H4T2 348 aaPredicted RBP13.45□□□□□ -0.26
USP35-207ENST00000530546 BCL9LQ86UU0 1499 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
USP35-207ENST00000530546 FDPSP14324 419 aaKnown RBP13.45□□□□□ -0.26
USP35-207ENST00000530546 CLEC4GQ6UXB4 293 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 CKAP2LQ8IYA6 745 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 PGBD1Q96JS3 809 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 GJB4Q9NTQ9 266 aa13.45□□□□□ -0.26
USP35-207ENST00000530546 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
USP35-207ENST00000530546 NAA16Q6N069 864 aaPredicted RBP13.44□□□□□ -0.26
USP35-207ENST00000530546 IFNL3Q8IZI9 196 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 CELF1Q92879 486 aaKnown RBP13.44□□□□□ -0.26
USP35-207ENST00000530546 NUP62CLQ9H1M0 184 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 SENP2Q9HC62 589 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 EPB41L4AQ9HCS5 686 aaPredicted RBP13.44□□□□□ -0.26
USP35-207ENST00000530546 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 ELP1O95163 1332 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 MYO5AQ9Y4I1 1855 aaKnown RBP13.44□□□□□ -0.26
USP35-207ENST00000530546 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 VGLL3A8MV65 326 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 BRD2P25440 801 aaKnown RBP13.44□□□□□ -0.26
USP35-207ENST00000530546 DHX37Q8IY37 1157 aaKnown RBP13.44□□□□□ -0.26
USP35-207ENST00000530546 ORC3Q9UBD5 711 aaPredicted RBP13.44□□□□□ -0.26
USP35-207ENST00000530546 NEDD4P46934 1319 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 NPHP1O15259 732 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 TDO2P48775 406 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 TERF2Q15554 542 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 NFXL1Q6ZNB6 911 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 RAI14Q9P0K7 980 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 CCNL1Q9UK58 526 aaPredicted RBP13.44□□□□□ -0.26
USP35-207ENST00000530546 CFAP45Q9UL16 551 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 SLC4A4Q9Y6R1 1079 aa13.44□□□□□ -0.26
USP35-207ENST00000530546 SALL1Q9NSC2 1324 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 SMTNL1A8MU46 457 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 PATL2C9JE40 543 aaKnown RBP13.43□□□□□ -0.26
USP35-207ENST00000530546 ZPR1O75312 459 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
USP35-207ENST00000530546 SETDB2Q96T68 719 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 TSPYL1Q9H0U9 437 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 CALCOCO1Q9P1Z2 691 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 COL4A1P02462 1669 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 CYP7A1P22680 504 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 MICU3Q86XE3 530 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 C8orf76Q96K31 380 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 USP28Q96RU2 1077 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 MYL10Q9BUA6 226 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 LRP5O75197 1615 aa13.43□□□□□ -0.26
USP35-207ENST00000530546 NR1I2O75469 434 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
USP35-207ENST00000530546 EVCP57679 992 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 TNMDQ9H2S6 317 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 KCNF1Q9H3M0 494 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 ANGEL1Q9UNK9 670 aaKnown RBP13.42□□□□□ -0.26
USP35-207ENST00000530546 ATRNO75882 1429 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 GSG1L2A8MUP6 293 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 DHX16O60231 1041 aaKnown RBP13.42□□□□□ -0.26
USP35-207ENST00000530546 POLR3DP05423 398 aaPredicted RBP13.42□□□□□ -0.26
USP35-207ENST00000530546 MAP3K11Q16584 847 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
USP35-207ENST00000530546 MINPP1Q9UNW1 487 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 MYH7P12883 1935 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 RTL9Q8NET4 1388 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 CNTNAP4Q9C0A0 1308 aa13.42□□□□□ -0.26
USP35-207ENST00000530546 ZBTB22O15209 634 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 SF3B3Q15393 1217 aaKnown RBP13.41□□□□□ -0.26
USP35-207ENST00000530546 TMEM67Q5HYA8 995 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 KRT222Q8N1A0 295 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 ZKSCAN3Q9BRR0 538 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 PYCARDQ9ULZ3 195 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 DDX60Q8IY21 1712 aaKnown RBP13.41□□□□□ -0.26
USP35-207ENST00000530546 SH2B2O14492 632 aaPredicted RBP13.41□□□□□ -0.26
USP35-207ENST00000530546 RPS6KA4O75676 772 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 METAP2P50579 478 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP35-207ENST00000530546 FBXL16Q8N461 479 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 CHMP4CQ96CF2 233 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 AIFM3Q96NN9 605 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 FUCA2Q9BTY2 467 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 NARFQ9UHQ1 456 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 TACC3Q9Y6A5 838 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 TULP2O00295 520 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 CCDC192P0DO97 292 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 KLRK1P26718 216 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 ADGRA1Q86SQ6 560 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 ILDR1Q86SU0 546 aaPredicted RBP13.41□□□□□ -0.26
USP35-207ENST00000530546 FNBP4Q8N3X1 1017 aaPredicted RBP13.41□□□□□ -0.26
USP35-207ENST00000530546 KIF18AQ8NI77 898 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 GNL3LQ9NVN8 582 aaKnown RBP13.41□□□□□ -0.26
USP35-207ENST00000530546 TFCP2L1Q9NZI6 479 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
USP35-207ENST00000530546 PAXBP1Q9Y5B6 917 aa13.41□□□□□ -0.26
USP35-207ENST00000530546 MINDY4BA8MYZ0 360 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 IFIT3O14879 490 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms