RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 FERP16591 822 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 ATP2A2P16615 1042 aaKnown RBP7.34□□□□□ -1.23
CTNND1-212ENST00000525902 PRKAR2BP31323 418 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 CYLC1P35663 651 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-212ENST00000525902 NFE2L2Q16236 605 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 FKBP15Q5T1M5 1219 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 MFN1Q8IWA4 741 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 MRPS27Q92552 414 aaKnown RBP7.34□□□□□ -1.23
CTNND1-212ENST00000525902 SIL1Q9H173 461 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 DNAJC25Q9H1X3 360 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 CLSTN2Q9H4D0 955 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 RGL1Q9NZL6 768 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 PTPRKQ15262 1439 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 ENO4A6NNW6 628 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 CUL4BQ13620 913 aa7.34□□□□□ -1.23
CTNND1-212ENST00000525902 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.34□□□□□ -1.23
CTNND1-212ENST00000525902 IPO5O00410 1097 aaKnown RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 BRD1O95696 1058 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 CETN2P41208 172 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 AMPHP49418 695 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 NANOGNBQ7Z5D8 188 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 ARHGEF2Q92974 986 aaKnown RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 TEKT1Q969V4 418 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 MAML3Q96JK9 1138 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 GDAP1L1Q96MZ0 367 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 NAP1L4Q99733 375 aaKnown RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 ESYT1Q9BSJ8 1104 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 AATFQ9NY61 560 aaKnown RBP eCLIP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 PSD3Q9NYI0 1048 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 RASAL2Q9UJF2 1139 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 G3BP2Q9UN86 482 aaKnown RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 TTF2Q9UNY4 1162 aaKnown RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 GSTTP1A0A1W2PQM5 241 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 STXBP3O00186 592 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 ARHGAP6O43182 974 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 EIF2S2P20042 333 aaKnown RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 CLEC17AQ6ZS10 378 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 STAMBPL1Q96FJ0 436 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 TSG101Q99816 390 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 SH3GL1Q99961 368 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 SPTLC3Q9NUV7 552 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 TMEM63CQ9P1W3 806 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 U3KPZ7 1027 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 TARSL2A2RTX5 802 aaKnown RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 MCF2LO15068 1137 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 PHEXP78562 749 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 LMNB2Q03252 620 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 ICA1Q05084 483 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 KIAA0753Q2KHM9 967 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 ERCC6LQ2NKX8 1250 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 ZNF280DQ6N043 979 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 FERMT3Q86UX7 667 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 NUP88Q99567 741 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 BICDL2A1A5D9 508 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 ARHGEF9O43307 516 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 STK3Q13188 491 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 MTMR3Q13615 1198 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 CCDC102BQ68D86 513 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 SENP3Q9H4L4 574 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 FAM204AQ9H8W3 233 aa7.33□□□□□ -1.24
CTNND1-212ENST00000525902 C6orf203Q9P0P8 240 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 PUF60Q9UHX1 559 aaKnown RBP7.33□□□□□ -1.24
CTNND1-212ENST00000525902 SMIM23A6NLE4 172 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 KRT86O43790 486 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 CHRM1P11229 460 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-212ENST00000525902 DHX9Q08211 1270 aaKnown RBP7.32□□□□□ -1.24
CTNND1-212ENST00000525902 Q4G0T1 1027 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 TCERG1LQ5VWI1 586 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 FYB2Q5VWT5 728 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 AOPEPQ8N6M6 819 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 BBOF1Q8ND07 529 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 FAM169AQ9Y6X4 670 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 SCAF11Q99590 1463 aaKnown RBP7.32□□□□□ -1.24
CTNND1-212ENST00000525902 ARHGAP10A1A4S6 786 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 PNMA6AP0CW24 399 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-212ENST00000525902 SDSP20132 328 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 ESRRGP62508 458 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 TRIM14Q14142 442 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 CWC27Q6UX04 472 aaKnown RBP7.32□□□□□ -1.24
CTNND1-212ENST00000525902 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.32□□□□□ -1.243e-6■■■■■ 50.8
CTNND1-212ENST00000525902 CAPZA3Q96KX2 299 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 SELENOOQ9BVL4 669 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 TSGA10Q9BZW7 698 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-212ENST00000525902 TTC41PQ6P2S7 1318 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 SSH2Q76I76 1423 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 CCDC151A5D8V7 595 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 PHLPP2Q6ZVD8 1323 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 PARP9Q8IXQ6 854 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 FAM186BQ8IYM0 893 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 CTTNBP2Q8WZ74 1663 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 NAPGQ99747 312 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-212ENST00000525902 NSD3Q9BZ95 1437 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 C10orf88Q9H8K7 445 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 KLC4Q9NSK0 619 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 NKIRAS1Q9NYS0 192 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 UHRF1BP1Q6BDS2 1440 aa7.32□□□□□ -1.24
CTNND1-212ENST00000525902 S100BP04271 92 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-212ENST00000525902 CHGBP05060 677 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms