RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 PKN2Q16513 984 aaKnown RBP7.15□□□□□ -1.26
PABPC1-223ENST00000523636 CLP1Q92989 425 aaKnown RBP7.15□□□□□ -1.26
PABPC1-223ENST00000523636 USP42Q9H9J4 1324 aaKnown RBP7.15□□□□□ -1.26
PABPC1-223ENST00000523636 TMEM229AB2RXF0 380 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 BACH1O14867 736 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 RPS6KA4O75676 772 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 ITGAEP38570 1179 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 SCNN1DP51172 638 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 GDF10P55107 478 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 B4GALNT3Q6L9W6 998 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 FBXO46Q6PJ61 603 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-223ENST00000523636 FAM177A1Q8N128 213 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-223ENST00000523636 ZNF296Q8WUU4 475 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-223ENST00000523636 HPS1Q92902 700 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 FAM122AQ96E09 287 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 TAOK3Q9H2K8 898 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 CD163L1Q9NR16 1453 aa7.14□□□□□ -1.27
PABPC1-223ENST00000523636 CACNA1GO43497 2377 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 SMG6Q86US8 1419 aaKnown RBP7.13□□□□□ -1.27
PABPC1-223ENST00000523636 PATL2C9JE40 543 aaKnown RBP7.13□□□□□ -1.27
PABPC1-223ENST00000523636 BRD1O95696 1058 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 AVPP01185 164 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 INHAP05111 366 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 RFC4P35249 363 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 KIF23Q02241 960 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-223ENST00000523636 AKAP4Q5JQC9 854 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 DLK2Q6UY11 383 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 Q7L0L9 218 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 C2CD5Q86YS7 1000 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 MEIOBQ8N635 442 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 CSRNP1Q96S65 589 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 GZF1Q9H116 711 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-223ENST00000523636 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 ETNK1Q9HBU6 452 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 ZNF358Q9NW07 568 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 STXBP5LQ9Y2K9 1186 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 XIRP2A4UGR9 3374 aa7.13□□□□□ -1.27
PABPC1-223ENST00000523636 POLR2AP24928 1970 aaKnown RBP7.13□□□□□ -1.27
PABPC1-223ENST00000523636 PKD1L2Q7Z442 2459 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 MUC6Q6W4X9 2439 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 CNTNAP4Q9C0A0 1308 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 SFI1A8K8P3 1242 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 NRG2O14511 850 aaPredicted RBP7.12□□□□□ -1.27
PABPC1-223ENST00000523636 EPS15P42566 896 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 PTGIRP43119 386 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 CBLBQ13191 982 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 KDF1Q8NAX2 398 aaPredicted RBP7.12□□□□□ -1.27
PABPC1-223ENST00000523636 LTV1Q96GA3 475 aaPredicted RBP7.12□□□□□ -1.27
PABPC1-223ENST00000523636 XAGE2Q96GT9 111 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 ATG3Q9NT62 314 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 ANKRD26Q9UPS8 1709 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 C5orf42Q9H799 3197 aa7.12□□□□□ -1.27
PABPC1-223ENST00000523636 TTC21AQ8NDW8 1320 aa7.11□□□□□ -1.27
PABPC1-223ENST00000523636 TJP1Q07157 1748 aa7.11□□□□□ -1.27
PABPC1-223ENST00000523636 FZD9O00144 591 aa7.11□□□□□ -1.27
PABPC1-223ENST00000523636 DGAT1O75907 488 aa7.11□□□□□ -1.27
PABPC1-223ENST00000523636 CLN3Q13286 438 aa7.11□□□□□ -1.27
PABPC1-223ENST00000523636 USHBP1Q8N6Y0 703 aa7.11□□□□□ -1.27
PABPC1-223ENST00000523636 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.11□□□□□ -1.27
PABPC1-223ENST00000523636 IP6K1Q92551 441 aa7.11□□□□□ -1.27
PABPC1-223ENST00000523636 TSEN34Q9BSV6 310 aaKnown RBP7.11□□□□□ -1.27
PABPC1-223ENST00000523636 GLIS2Q9BZE0 524 aaPredicted RBP7.11□□□□□ -1.27
PABPC1-223ENST00000523636 MAP3K19Q56UN5 1328 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 SYNGAP1Q96PV0 1343 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 FAM187AA6NFU0 413 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 CAPN5O15484 640 aaPredicted RBP7.1□□□□□ -1.27
PABPC1-223ENST00000523636 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
PABPC1-223ENST00000523636 NFIXQ14938 502 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 CTC1Q2NKJ3 1217 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 NBPF6Q5VWK0 638 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 C7orf43Q8WVR3 580 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 NBPF4Q96M43 638 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 ESYT1Q9BSJ8 1104 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 BCL11AQ9H165 835 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 ARHGEF10LQ9HCE6 1279 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 MTMR10Q9NXD2 777 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 SNED1Q8TER0 1413 aa7.1□□□□□ -1.27
PABPC1-223ENST00000523636 A0A1W2PRU2 124 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 IL2RAP01589 272 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 GPC1P35052 558 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 EPHA4P54764 986 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 KCNA1Q09470 495 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 MTFR1Q15390 333 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 GAS2L2Q8NHY3 880 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 C1orf216Q8TAB5 229 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 CNKSR1Q969H4 720 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 ZNF277Q9NRM2 450 aaPredicted RBP7.09□□□□□ -1.27
PABPC1-223ENST00000523636 HRH3Q9Y5N1 445 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 REV3LO60673 3130 aa7.09□□□□□ -1.27
PABPC1-223ENST00000523636 PCDH11XQ9BZA7 1347 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 PCDH11YQ9BZA8 1340 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 BAHCC1Q9P281 2608 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 CARNS1A5YM72 827 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 H0YIN7 160 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 GFRA3O60609 400 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 UPP2O95045 317 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 TBC1D8O95759 1140 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 WEE1P30291 646 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 SMTNP53814 917 aa7.08□□□□□ -1.28
PABPC1-223ENST00000523636 HUNKP57058 714 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms