RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 MMP14P50281 582 aa11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 KIF23Q02241 960 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 NBPF9Q3BBW0 867 aa11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 TTLL5Q6EMB2 1281 aa11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 LMBR1LQ6UX01 489 aa11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 OGFOD1Q8N543 542 aa11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 ABHD8Q96I13 439 aa11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 MYO3BQ8WXR4 1341 aa11.75□□□□□ -0.53
CTNNA1-221ENST00000520339 ARHGAP33O14559 1287 aa11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 TAF5LO75529 589 aa11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 ALDH1L1O75891 902 aa11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 KCNJ4P48050 445 aa11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 ZNF157P51786 506 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 FKBP1BP68106 108 aa11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 GTF2IP78347 998 aa11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 LHX8Q68G74 356 aa11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 HELBQ8NG08 1087 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 LIMD1Q9UGP4 676 aa11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 SCAF8Q9UPN6 1271 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-221ENST00000520339 SLC10A3P09131 477 aa11.73□□□□□ -0.53
CTNNA1-221ENST00000520339 PRAMEF18Q5VWM3 479 aa11.73□□□□□ -0.53
CTNNA1-221ENST00000520339 ZBED3Q96IU2 234 aaPredicted RBP11.73□□□□□ -0.53
CTNNA1-221ENST00000520339 SRCIN1Q9C0H9 1055 aa11.73□□□□□ -0.53
CTNNA1-221ENST00000520339 C9orf78Q9NZ63 289 aaPredicted RBP11.73□□□□□ -0.53
CTNNA1-221ENST00000520339 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
CTNNA1-221ENST00000520339 SCN9AQ15858 1988 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 THSD7BQ9C0I4 1608 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 MCM6Q14566 821 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 CCDC57Q2TAC2 916 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 SLC4A10Q6U841 1118 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 MOB2Q70IA6 237 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 RASAL3Q86YV0 1011 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 KIAA0825Q8IV33 1275 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 MRPL50Q8N5N7 158 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 KAZALD1Q96I82 304 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 ZNF594Q96JF6 807 aaPredicted RBP11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 CSRNP1Q96S65 589 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 HDAC9Q9UKV0 1011 aa11.72□□□□□ -0.53
CTNNA1-221ENST00000520339 UBE2Q2LH0YL09 131 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 SASH1O94885 1247 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 IL1R1P14778 569 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 LDHAL6AQ6ZMR3 332 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 CERS5Q8N5B7 392 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 CLUAP1Q96AJ1 413 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 SUCLG2Q96I99 432 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 RNF186Q9NXI6 227 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 SAGE1Q9NXZ1 904 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 RABGEF1Q9UJ41 708 aa11.71□□□□□ -0.53
CTNNA1-221ENST00000520339 UTYO14607 1347 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 MOXD2PA6NHM9 499 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 E9PSI1 815 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 ST18O60284 1047 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 NBPF7P0C2Y1 421 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 FKBP1AP62942 108 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 CSPP1Q1MSJ5 1256 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 TAF7LQ5H9L4 462 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 MTMR14Q8NCE2 650 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 MCOLN1Q9GZU1 580 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 CNNM1Q9NRU3 951 aa11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 SEPT9Q9UHD8 586 aaPredicted RBP11.7□□□□□ -0.54
CTNNA1-221ENST00000520339 SPTLC1O15269 473 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 PLIN1O60240 522 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 TRPA1O75762 1119 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 NDUFV2P19404 249 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 RFC5P40937 340 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 EMP3P54852 163 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 SLFN5Q08AF3 891 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 ZNF804AQ7Z570 1209 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 APOBEC3FQ8IUX4 373 aaKnown RBP11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 SSH1Q8WYL5 1049 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 PUS3Q9BZE2 481 aaKnown RBP11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 RIPOR2Q9Y4F9 1068 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 TRPM7Q96QT4 1865 aa11.69□□□□□ -0.54
CTNNA1-221ENST00000520339 UBE4AQ14139 1066 aa11.68□□□□□ -0.54
CTNNA1-221ENST00000520339 DLGAP5Q15398 846 aa11.68□□□□□ -0.54
CTNNA1-221ENST00000520339 RABL6Q3YEC7 729 aaPredicted RBP11.68□□□□□ -0.54
CTNNA1-221ENST00000520339 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-221ENST00000520339 HOMEZQ8IX15 550 aa11.68□□□□□ -0.54
CTNNA1-221ENST00000520339 TDRD7Q8NHU6 1098 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-221ENST00000520339 FAM84BQ96KN1 310 aaPredicted RBP11.68□□□□□ -0.54
CTNNA1-221ENST00000520339 PCDHAC2Q9Y5I4 1007 aa11.68□□□□□ -0.54
CTNNA1-221ENST00000520339 FAM205AQ6ZU69 1335 aa11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 CCDC85CA6NKD9 419 aa11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 NF2P35240 595 aa11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 PTPN12Q05209 780 aaKnown RBP11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 CFAP100Q494V2 611 aa11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 LDLRAD1Q5T700 205 aa11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 ANKRD44Q8N8A2 993 aa11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 PRMT6Q96LA8 375 aaPredicted RBP11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 SLC4A5Q9BY07 1137 aa11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 DEFB129Q9H1M3 183 aa11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 BICC1Q9H694 974 aaKnown RBP11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 JAG2Q9Y219 1238 aa11.67□□□□□ -0.54
CTNNA1-221ENST00000520339 PTPRCP08575 1304 aa11.66□□□□□ -0.54
CTNNA1-221ENST00000520339 A6NJR5 290 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms