RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 GNL3LQ9NVN8 582 aaKnown RBP15.2■□□□□ 0.02
SNHG4-208ENST00000514110 PTPN22Q9Y2R2 807 aa15.2■□□□□ 0.02
SNHG4-208ENST00000514110 CENPFP49454 3210 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 SLC34A2O95436 690 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 LDHBP07195 334 aaKnown RBP15.19■□□□□ 0.02
SNHG4-208ENST00000514110 TCP10Q12799 353 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 NFIAQ12857 509 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 TAF1CQ15572 869 aaPredicted RBP15.19■□□□□ 0.02
SNHG4-208ENST00000514110 DCAF15Q66K64 600 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 INTS3Q68E01 1043 aaKnown RBP15.19■□□□□ 0.02
SNHG4-208ENST00000514110 FAM151AQ8WW52 585 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 HOOK2Q96ED9 719 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 EFCC1Q9HA90 598 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 ZFYVE28Q9HCC9 887 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 DENND2AQ9ULE3 1009 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 HDAC5Q9UQL6 1122 aa15.19■□□□□ 0.02
SNHG4-208ENST00000514110 SALL1Q9NSC2 1324 aa15.18■□□□□ 0.02
SNHG4-208ENST00000514110 IRF6O14896 467 aa15.18■□□□□ 0.02
SNHG4-208ENST00000514110 INPP5BP32019 993 aa15.18■□□□□ 0.02
SNHG4-208ENST00000514110 PPIL2Q13356 520 aa15.18■□□□□ 0.02
SNHG4-208ENST00000514110 CCDC102BQ68D86 513 aa15.18■□□□□ 0.02
SNHG4-208ENST00000514110 ARHGAP45Q92619 1136 aa15.18■□□□□ 0.02
SNHG4-208ENST00000514110 ZNF341Q9BYN7 854 aa15.18■□□□□ 0.02
SNHG4-208ENST00000514110 FAM198AQ9UFP1 575 aa15.18■□□□□ 0.02
SNHG4-208ENST00000514110 POTEFA5A3E0 1075 aa15.17■□□□□ 0.02
SNHG4-208ENST00000514110 SEMA3EO15041 775 aa15.17■□□□□ 0.02
SNHG4-208ENST00000514110 CETPP11597 493 aa15.17■□□□□ 0.02
SNHG4-208ENST00000514110 TIMM10P62072 90 aa15.17■□□□□ 0.02
SNHG4-208ENST00000514110 ZFPM1Q8IX07 1006 aa15.17■□□□□ 0.02
SNHG4-208ENST00000514110 USP40Q9NVE5 1235 aa15.17■□□□□ 0.02
SNHG4-208ENST00000514110 TNNQ9UQP3 1299 aa15.17■□□□□ 0.02
SNHG4-208ENST00000514110 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.17■□□□□ 0.02
SNHG4-208ENST00000514110 BTBD19C9JJ37 291 aa15.16■□□□□ 0.02
SNHG4-208ENST00000514110 SRGAP3O43295 1099 aa15.16■□□□□ 0.02
SNHG4-208ENST00000514110 GNAI3P08754 354 aa15.16■□□□□ 0.02
SNHG4-208ENST00000514110 SNAPC2Q13487 334 aa15.16■□□□□ 0.02
SNHG4-208ENST00000514110 RASGRF1Q13972 1273 aa15.16■□□□□ 0.02
SNHG4-208ENST00000514110 ZNF112Q9UJU3 913 aa15.16■□□□□ 0.02
SNHG4-208ENST00000514110 PDE4DIPQ5VU43 2346 aa15.15■□□□□ 0.02
SNHG4-208ENST00000514110 ZBTB22O15209 634 aa15.15■□□□□ 0.02
SNHG4-208ENST00000514110 TRIM27P14373 513 aa15.15■□□□□ 0.02
SNHG4-208ENST00000514110 PPATQ06203 517 aa15.15■□□□□ 0.02
SNHG4-208ENST00000514110 TFCP2Q12800 502 aa15.15■□□□□ 0.02
SNHG4-208ENST00000514110 MTX1Q13505 466 aa15.15■□□□□ 0.02
SNHG4-208ENST00000514110 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.15■□□□□ 0.02
SNHG4-208ENST00000514110 ARMC5Q96C12 935 aa15.15■□□□□ 0.02
SNHG4-208ENST00000514110 AK9Q5TCS8 1911 aa15.14■□□□□ 0.01
SNHG4-208ENST00000514110 MYH2Q9UKX2 1941 aa15.14■□□□□ 0.01
SNHG4-208ENST00000514110 MKI67P46013 3256 aaKnown RBP15.14■□□□□ 0.01
SNHG4-208ENST00000514110 A0A1B0GUL7 405 aa15.14■□□□□ 0.01
SNHG4-208ENST00000514110 TLR2O60603 784 aa15.14■□□□□ 0.01
SNHG4-208ENST00000514110 BCAR3O75815 825 aa15.14■□□□□ 0.01
SNHG4-208ENST00000514110 PRPF38BQ5VTL8 546 aaKnown RBP15.14■□□□□ 0.01
SNHG4-208ENST00000514110 XAGE2Q96GT9 111 aa15.14■□□□□ 0.01
SNHG4-208ENST00000514110 ARHGAP39Q9C0H5 1083 aa15.14■□□□□ 0.01
SNHG4-208ENST00000514110 ZCCHC17Q9NP64 241 aaKnown RBP15.14■□□□□ 0.01
SNHG4-208ENST00000514110 ZSWIM8A7E2V4 1837 aa15.14■□□□□ 0.01
SNHG4-208ENST00000514110 GAKO14976 1311 aa15.14■□□□□ 0.01
SNHG4-208ENST00000514110 PDS5AQ29RF7 1337 aaKnown RBP15.14■□□□□ 0.01
SNHG4-208ENST00000514110 ATRNL1Q5VV63 1379 aa15.13■□□□□ 0.01
SNHG4-208ENST00000514110 BRCA2P51587 3418 aa15.13■□□□□ 0.01
SNHG4-208ENST00000514110 RGS3P49796 1198 aa15.13■□□□□ 0.01
SNHG4-208ENST00000514110 ZGPATQ8N5A5 531 aaKnown RBP15.13■□□□□ 0.01
SNHG4-208ENST00000514110 IDI2Q9BXS1 227 aa15.13■□□□□ 0.01
SNHG4-208ENST00000514110 ABCF2Q9UG63 623 aa15.13■□□□□ 0.01
SNHG4-208ENST00000514110 AKAP2Q9Y2D5 859 aa15.13■□□□□ 0.01
SNHG4-208ENST00000514110 PTCH2Q9Y6C5 1203 aa15.13■□□□□ 0.01
SNHG4-208ENST00000514110 RBBP6Q7Z6E9 1792 aaKnown RBP15.13■□□□□ 0.01
SNHG4-208ENST00000514110 RFX7Q2KHR2 1363 aa15.12■□□□□ 0.01
SNHG4-208ENST00000514110 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
SNHG4-208ENST00000514110 WDHD1O75717 1129 aaPredicted RBP15.12■□□□□ 0.01
SNHG4-208ENST00000514110 MOGSQ13724 837 aa15.12■□□□□ 0.01
SNHG4-208ENST00000514110 ARHGEF6Q15052 776 aa15.12■□□□□ 0.01
SNHG4-208ENST00000514110 NOL9Q5SY16 702 aaKnown RBP15.12■□□□□ 0.01
SNHG4-208ENST00000514110 ATF7IPQ6VMQ6 1270 aa15.12■□□□□ 0.01
SNHG4-208ENST00000514110 SH3BP5LQ7L8J4 393 aa15.12■□□□□ 0.01
SNHG4-208ENST00000514110 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
SNHG4-208ENST00000514110 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
SNHG4-208ENST00000514110 CLUAP1Q96AJ1 413 aa15.12■□□□□ 0.01
SNHG4-208ENST00000514110 KCNH4Q9UQ05 1017 aa15.12■□□□□ 0.01
SNHG4-208ENST00000514110 DOCK2Q92608 1830 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 PNMA6EA0A0J9YXQ4 647 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 PHF20L1A8MW92 1017 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 ENTPD3O75355 529 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 GNAI2P04899 355 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 SLURP2P0DP57 97 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 EN2P19622 333 aaPredicted RBP15.11■□□□□ 0.01
SNHG4-208ENST00000514110 LACTBP83111 547 aaPredicted RBP15.11■□□□□ 0.01
SNHG4-208ENST00000514110 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
SNHG4-208ENST00000514110 ANKRD23Q86SG2 305 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 ZNF384Q8TF68 577 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 FAM163AQ96GL9 167 aaPredicted RBP15.11■□□□□ 0.01
SNHG4-208ENST00000514110 ZNF333Q96JL9 665 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 NEUROD6Q96NK8 337 aa15.11■□□□□ 0.01
SNHG4-208ENST00000514110 DDX4Q9NQI0 724 aaKnown RBP15.11■□□□□ 0.01
SNHG4-208ENST00000514110 DDTLA6NHG4 134 aaPredicted RBP15.1■□□□□ 0.01
SNHG4-208ENST00000514110 PDHXO00330 501 aa15.1■□□□□ 0.01
SNHG4-208ENST00000514110 BTDP43251 543 aa15.1■□□□□ 0.01
SNHG4-208ENST00000514110 MECOMQ03112 1051 aa15.1■□□□□ 0.01
SNHG4-208ENST00000514110 SLC9C1Q4G0N8 1177 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms