RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TBC1D32Q96NH3 1257 aa6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 SAP130Q9H0E3 1048 aa6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 CTTNBP2Q8WZ74 1663 aa6.26□□□□□ -1.41
PDLIM5-218ENST00000513341 ARHGEF12Q9NZN5 1544 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 LOC100289279A0A1B0GTE1 492 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 ZAP70P43403 619 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 CEBPAP49715 358 aaPredicted RBP6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 USP11P51784 963 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 PKN1Q16512 942 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 DUSP27Q5VZP5 1158 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 CDPF1Q6NVV7 123 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 FNBP4Q8N3X1 1017 aaPredicted RBP6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 C2CD4AQ8NCU7 369 aaPredicted RBP6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 BCL7CQ8WUZ0 217 aaPredicted RBP6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 TMEM40Q8WWA1 233 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 DZANK1Q9NVP4 752 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 ZC3H7BQ9UGR2 993 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 SLC5A6Q9Y289 635 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 ATP10AO60312 1499 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 CFAP74Q9C0B2 1584 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 ZFYVE16Q7Z3T8 1539 aa6.25□□□□□ -1.41
PDLIM5-218ENST00000513341 PDE2AO00408 941 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-218ENST00000513341 XKR5Q6UX68 686 aa6.24□□□□□ -1.41
PDLIM5-218ENST00000513341 WFDC3Q8IUB2 231 aa6.24□□□□□ -1.41
PDLIM5-218ENST00000513341 TMEM102Q8N9M5 508 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-218ENST00000513341 FBLIM1Q8WUP2 373 aa6.24□□□□□ -1.41
PDLIM5-218ENST00000513341 SLC7A3Q8WY07 619 aa6.24□□□□□ -1.41
PDLIM5-218ENST00000513341 MISP3Q96FF7 219 aa6.24□□□□□ -1.41
PDLIM5-218ENST00000513341 ELP3Q9H9T3 547 aa6.24□□□□□ -1.41
PDLIM5-218ENST00000513341 SOX1O00570 391 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-218ENST00000513341 SOX4Q06945 474 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-218ENST00000513341 OCLNQ16625 522 aa6.23□□□□□ -1.41
PDLIM5-218ENST00000513341 ZNF792Q3KQV3 632 aa6.23□□□□□ -1.41
PDLIM5-218ENST00000513341 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
PDLIM5-218ENST00000513341 TRAPPC8Q9Y2L5 1435 aa6.23□□□□□ -1.41
PDLIM5-218ENST00000513341 ARID3CA6NKF2 412 aa6.22□□□□□ -1.41
PDLIM5-218ENST00000513341 FAM170BA6NMN3 283 aa6.22□□□□□ -1.41
PDLIM5-218ENST00000513341 RPLP1P05386 114 aaKnown RBP6.22□□□□□ -1.41
PDLIM5-218ENST00000513341 MAP7Q14244 749 aa6.22□□□□□ -1.41
PDLIM5-218ENST00000513341 KSR1Q8IVT5 923 aa6.22□□□□□ -1.41
PDLIM5-218ENST00000513341 BSNDQ8WZ55 320 aa6.22□□□□□ -1.41
PDLIM5-218ENST00000513341 PMEPA1Q969W9 287 aa6.22□□□□□ -1.41
PDLIM5-218ENST00000513341 ACIN1Q9UKV3 1341 aaKnown RBP6.22□□□□□ -1.41
PDLIM5-218ENST00000513341 SIGLEC1Q9BZZ2 1709 aa6.22□□□□□ -1.41
PDLIM5-218ENST00000513341 HECW1Q76N89 1606 aa6.21□□□□□ -1.41
PDLIM5-218ENST00000513341 TOM1O60784 492 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 DLGAP3O95886 979 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 LMOD1P29536 600 aaPredicted RBP6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 IKBKEQ14164 716 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 EFCAB2Q5VUJ9 269 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 HGSNATQ68CP4 663 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 VN1R5Q7Z5H4 357 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 CILP2Q8IUL8 1156 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 ABTB2Q8N961 1025 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 GLIS3Q8NEA6 775 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 GPR152Q8TDT2 470 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 TMEM63CQ9P1W3 806 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 STIM2Q9P246 746 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 C9orf84Q5VXU9 1444 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 SCAPERQ9BY12 1400 aa6.21□□□□□ -1.42
PDLIM5-218ENST00000513341 PLCH2O75038 1416 aa6.2□□□□□ -1.42
PDLIM5-218ENST00000513341 NCOA1Q15788 1441 aa6.2□□□□□ -1.42
PDLIM5-218ENST00000513341 DRD2P14416 443 aa6.2□□□□□ -1.42
PDLIM5-218ENST00000513341 PLCL1Q15111 1095 aa6.2□□□□□ -1.42
PDLIM5-218ENST00000513341 FAM168AQ92567 244 aa6.2□□□□□ -1.42
PDLIM5-218ENST00000513341 NXPE3Q969Y0 559 aa6.2□□□□□ -1.42
PDLIM5-218ENST00000513341 SLC38A3Q99624 504 aa6.2□□□□□ -1.42
PDLIM5-218ENST00000513341 CNTN3Q9P232 1028 aa6.2□□□□□ -1.42
PDLIM5-218ENST00000513341 RAPGEF6Q8TEU7 1601 aa6.2□□□□□ -1.42
PDLIM5-218ENST00000513341 FUT4P22083 530 aa6.19□□□□□ -1.42
PDLIM5-218ENST00000513341 ZNF765Q7L2R6 523 aa6.19□□□□□ -1.42
PDLIM5-218ENST00000513341 SPRED2Q7Z698 418 aa6.19□□□□□ -1.42
PDLIM5-218ENST00000513341 FAM84AQ96KN4 292 aa6.19□□□□□ -1.42
PDLIM5-218ENST00000513341 USP26Q9BXU7 913 aa6.19□□□□□ -1.42
PDLIM5-218ENST00000513341 KANSL3Q9P2N6 904 aa6.19□□□□□ -1.42
PDLIM5-218ENST00000513341 PRXQ9BXM0 1461 aa6.19□□□□□ -1.42
PDLIM5-218ENST00000513341 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.19□□□□□ -1.42
PDLIM5-218ENST00000513341 CNTLNQ9NXG0 1405 aa6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 NUP153P49790 1475 aaKnown RBP6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 CES1P23141 567 aa6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 HSPA1LP34931 641 aa6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 MESP2Q0VG99 397 aa6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 SEZ6L2Q6UXD5 910 aa6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 ZNF438Q7Z4V0 828 aa6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 PRIMPOLQ96LW4 560 aa6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 NRSN2Q9GZP1 204 aa6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 GSX1Q9H4S2 264 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 REREQ9P2R6 1566 aa6.18□□□□□ -1.42
PDLIM5-218ENST00000513341 NPATQ14207 1427 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 C3P01024 1663 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 AGLP35573 1532 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 ADH5P11766 374 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 ACPPP15309 386 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 TMEM132AQ24JP5 1023 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 OGFOD3Q6PK18 319 aa6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 PROSER2Q86WR7 435 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 CALR3Q96L12 384 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 BHLHE41Q9C0J9 482 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-218ENST00000513341 ACSS3Q9H6R3 686 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms