RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 PBX4Q9BYU1 374 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 DZANK1Q9NVP4 752 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 NCOA2Q15596 1464 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 MBD5Q9P267 1494 aa5.45□□□□□ -1.54
UBE2D3-226ENST00000508635 PNMA6FA0A0J9YX94 578 aa5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 ANKRD33BA6NCL7 494 aa5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 HSPA2P54652 639 aa5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 PEAR1Q5VY43 1037 aaPredicted RBP5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 IL22RA1Q8N6P7 574 aa5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 CCDC74AQ96AQ1 378 aa5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 ALKBH8Q96BT7 664 aaKnown RBP5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 SETDB2Q96T68 719 aa5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 POP1Q99575 1024 aaKnown RBP5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 NPHS2Q9NP85 383 aa5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 PRDM6Q9NQX0 595 aa5.44□□□□□ -1.54
UBE2D3-226ENST00000508635 ATP7AQ04656 1500 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 INO80Q9ULG1 1556 aaPredicted RBP5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 A0A1W2PP55 124 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 NFKBIEO00221 500 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 TMCO4Q5TGY1 634 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 MSL1Q68DK7 614 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 TXNDC11Q6PKC3 985 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 PI16Q6UXB8 463 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 WFDC8Q8IUA0 241 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 GALNT12Q8IXK2 581 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 ASAP3Q8TDY4 903 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 EPS8L3Q8TE67 593 aaKnown RBP5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 TTC9Q92623 222 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 DNAJC25Q9H1X3 360 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 SH2B1Q9NRF2 756 aaPredicted RBP5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 WWC3Q9ULE0 1092 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 A2MP01023 1474 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 LRRC9Q6ZRR7 1453 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 MAP3K1Q13233 1512 aa5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 SUPT6HQ7KZ85 1726 aaKnown RBP5.43□□□□□ -1.54
UBE2D3-226ENST00000508635 PLXNC1O60486 1568 aa5.42□□□□□ -1.54
UBE2D3-226ENST00000508635 RTEL1-TNFRSF6BF6WH68 1400 aa5.42□□□□□ -1.54
UBE2D3-226ENST00000508635 CNTLNQ9NXG0 1405 aa5.42□□□□□ -1.54
UBE2D3-226ENST00000508635 METTL12A8MUP2 240 aa5.42□□□□□ -1.54
UBE2D3-226ENST00000508635 PDE2AO00408 941 aaPredicted RBP5.42□□□□□ -1.54
UBE2D3-226ENST00000508635 GADD45BO75293 160 aaPredicted RBP5.42□□□□□ -1.54
UBE2D3-226ENST00000508635 P4HBP07237 508 aaKnown RBP5.42□□□□□ -1.54
UBE2D3-226ENST00000508635 IRAK1P51617 712 aa5.42□□□□□ -1.54
UBE2D3-226ENST00000508635 RNF112Q9ULX5 631 aa5.42□□□□□ -1.54
UBE2D3-226ENST00000508635 CAMSAP2Q08AD1 1489 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 LINC01387J3KSC0 135 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 PTPRAP18433 802 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 CDC27P30260 824 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 FMR1Q06787 632 aaKnown RBP eCLIP5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 TRIM28Q13263 835 aaKnown RBP5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 ENOX2Q16206 610 aaKnown RBP5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 DNAJC14Q6Y2X3 702 aaPredicted RBP5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 ILDR2Q71H61 639 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 TMEM102Q8N9M5 508 aaPredicted RBP5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 NXPE3Q969Y0 559 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 EHD4Q9H223 541 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 LIN7BQ9HAP6 207 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 RNF114Q9Y508 228 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 ZMYM3Q14202 1370 aa5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 DHX29Q7Z478 1369 aaKnown RBP5.41□□□□□ -1.54
UBE2D3-226ENST00000508635 C3P01024 1663 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 PREX1Q8TCU6 1659 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 UHRF1BP1Q6BDS2 1440 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 CCDC141Q6ZP82 1450 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 A0A0A0MRY4 1105 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 FAM177BA6PVY3 158 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 EPHA1P21709 976 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 GRIK4Q16099 956 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 SPRED3Q2MJR0 410 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 GGT6Q6P531 493 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 NLRP2Q9NX02 1062 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 PPME1Q9Y570 386 aa5.4□□□□□ -1.54
UBE2D3-226ENST00000508635 ADGBQ8N7X0 1667 aa5.4□□□□□ -1.55
UBE2D3-226ENST00000508635 NPATQ14207 1427 aa5.4□□□□□ -1.55
UBE2D3-226ENST00000508635 ARHGEF5Q12774 1597 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 LDHBP07195 334 aaKnown RBP5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 TSPY4P0CV99 314 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 TSPY10P0CW01 314 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 GRIA4P48058 902 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 MFAP1P55081 439 aaKnown RBP5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 RAC1P63000 192 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 ATP2B2Q01814 1243 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 KIAA0319Q5VV43 1072 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 NPAS4Q8IUM7 802 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 CCNJLQ8IV13 435 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 TCF12Q99081 682 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 CARD10Q9BWT7 1032 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 MROH2AA6NES4 1674 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 MYOM3Q5VTT5 1437 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 MIA2Q96PC5 1412 aa5.39□□□□□ -1.55
UBE2D3-226ENST00000508635 A0A096LPE4 126 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 A0A1W2PPZ6 126 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 C9orf172C9J069 976 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 KIF3BO15066 747 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 DEAF1O75398 565 aaPredicted RBP5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 CABP4P57796 275 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 GRM2Q14416 872 aa5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 EAPPQ56P03 285 aaPredicted RBP5.38□□□□□ -1.55
UBE2D3-226ENST00000508635 SHISA2Q6UWI4 295 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms