RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 CCDC102BQ68D86 513 aa24.75■■□□□ 1.55
UBE2D3-220ENST00000505307 WRNIP1Q96S55 665 aa24.75■■□□□ 1.55
UBE2D3-220ENST00000505307 PDS5AQ29RF7 1337 aaKnown RBP24.75■■□□□ 1.55
UBE2D3-220ENST00000505307 CCL15-CCL14A0A0B4J2E2 113 aa24.74■■□□□ 1.55
UBE2D3-220ENST00000505307 WDHD1O75717 1129 aaPredicted RBP24.74■■□□□ 1.55
UBE2D3-220ENST00000505307 DIXDC1Q155Q3 683 aa24.74■■□□□ 1.55
UBE2D3-220ENST00000505307 CCL15Q16663 113 aa24.74■■□□□ 1.55
UBE2D3-220ENST00000505307 CDC42EP5Q6NZY7 148 aa24.74■■□□□ 1.55
UBE2D3-220ENST00000505307 OTUD5Q96G74 571 aa24.74■■□□□ 1.55
UBE2D3-220ENST00000505307 ZNF341Q9BYN7 854 aa24.74■■□□□ 1.55
UBE2D3-220ENST00000505307 GNAI2P04899 355 aa24.73■■□□□ 1.55
UBE2D3-220ENST00000505307 SLF2Q8IX21 1173 aa24.73■■□□□ 1.55
UBE2D3-220ENST00000505307 CNKSR2Q8WXI2 1034 aa24.73■■□□□ 1.55
UBE2D3-220ENST00000505307 BRI3BPQ8WY22 251 aa24.73■■□□□ 1.55
UBE2D3-220ENST00000505307 TRIM17Q9Y577 477 aa24.73■■□□□ 1.55
UBE2D3-220ENST00000505307 SNCAIPQ9Y6H5 919 aa24.73■■□□□ 1.55
UBE2D3-220ENST00000505307 CETPP11597 493 aa24.72■■□□□ 1.55
UBE2D3-220ENST00000505307 SP3Q02447 781 aa24.72■■□□□ 1.55
UBE2D3-220ENST00000505307 MVPQ14764 893 aaKnown RBP24.72■■□□□ 1.55
UBE2D3-220ENST00000505307 SPTY2D1Q68D10 685 aaPredicted RBP24.72■■□□□ 1.55
UBE2D3-220ENST00000505307 OTOP1Q7RTM1 612 aa24.72■■□□□ 1.55
UBE2D3-220ENST00000505307 FRAT1Q92837 279 aaPredicted RBP24.72■■□□□ 1.55
UBE2D3-220ENST00000505307 ZFYVE28Q9HCC9 887 aa24.72■■□□□ 1.55
UBE2D3-220ENST00000505307 ZCCHC17Q9NP64 241 aaKnown RBP24.72■■□□□ 1.55
UBE2D3-220ENST00000505307 A0A1B0GUL7 405 aa24.71■■□□□ 1.55
UBE2D3-220ENST00000505307 BCAR3O75815 825 aa24.71■■□□□ 1.55
UBE2D3-220ENST00000505307 ADORA1P30542 326 aa24.71■■□□□ 1.55
UBE2D3-220ENST00000505307 TIMM10P62072 90 aa24.71■■□□□ 1.55
UBE2D3-220ENST00000505307 ARHGEF6Q15052 776 aa24.71■■□□□ 1.55
UBE2D3-220ENST00000505307 USP40Q9NVE5 1235 aa24.71■■□□□ 1.55
UBE2D3-220ENST00000505307 TFCP2Q12800 502 aa24.7■■□□□ 1.54
UBE2D3-220ENST00000505307 PPIL2Q13356 520 aa24.7■■□□□ 1.54
UBE2D3-220ENST00000505307 SNAPC2Q13487 334 aa24.7■■□□□ 1.54
UBE2D3-220ENST00000505307 TAF1CQ15572 869 aaPredicted RBP24.7■■□□□ 1.54
UBE2D3-220ENST00000505307 ZKSCAN4Q969J2 545 aaPredicted RBP24.7■■□□□ 1.54
UBE2D3-220ENST00000505307 PPATQ06203 517 aa24.69■■□□□ 1.54
UBE2D3-220ENST00000505307 TCP10Q12799 353 aa24.69■■□□□ 1.54
UBE2D3-220ENST00000505307 RASGRF1Q13972 1273 aa24.69■■□□□ 1.54
UBE2D3-220ENST00000505307 MIGA2Q7L4E1 593 aa24.69■■□□□ 1.54
UBE2D3-220ENST00000505307 FAM163AQ96GL9 167 aaPredicted RBP24.69■■□□□ 1.54
UBE2D3-220ENST00000505307 XAGE2Q96GT9 111 aa24.69■■□□□ 1.54
UBE2D3-220ENST00000505307 EFCC1Q9HA90 598 aa24.69■■□□□ 1.54
UBE2D3-220ENST00000505307 ZNF112Q9UJU3 913 aa24.69■■□□□ 1.54
UBE2D3-220ENST00000505307 GAKO14976 1311 aa24.68■■□□□ 1.54
UBE2D3-220ENST00000505307 ZKSCAN2Q63HK3 967 aa24.68■■□□□ 1.54
UBE2D3-220ENST00000505307 DZIP1Q86YF9 867 aaKnown RBP24.68■■□□□ 1.54
UBE2D3-220ENST00000505307 CD99L2Q8TCZ2 262 aa24.68■■□□□ 1.54
UBE2D3-220ENST00000505307 IRF6O14896 467 aa24.67■■□□□ 1.54
UBE2D3-220ENST00000505307 NFIAQ12857 509 aa24.67■■□□□ 1.54
UBE2D3-220ENST00000505307 G3BP1Q13283 466 aaKnown RBP eCLIP24.67■■□□□ 1.54
UBE2D3-220ENST00000505307 FAM43AQ8N2R8 423 aa24.67■■□□□ 1.54
UBE2D3-220ENST00000505307 CLUAP1Q96AJ1 413 aa24.67■■□□□ 1.54
UBE2D3-220ENST00000505307 IDI2Q9BXS1 227 aa24.67■■□□□ 1.54
UBE2D3-220ENST00000505307 FAM198AQ9UFP1 575 aa24.67■■□□□ 1.54
UBE2D3-220ENST00000505307 ABCF2Q9UG63 623 aa24.67■■□□□ 1.54
UBE2D3-220ENST00000505307 ENTPD3O75355 529 aa24.66■■□□□ 1.54
UBE2D3-220ENST00000505307 NEUROD6Q96NK8 337 aa24.66■■□□□ 1.54
UBE2D3-220ENST00000505307 PTPN22Q9Y2R2 807 aa24.66■■□□□ 1.54
UBE2D3-220ENST00000505307 INPP5BP32019 993 aa24.65■■□□□ 1.54
UBE2D3-220ENST00000505307 NOL9Q5SY16 702 aaKnown RBP24.65■■□□□ 1.54
UBE2D3-220ENST00000505307 GORABQ5T7V8 394 aa24.65■■□□□ 1.54
UBE2D3-220ENST00000505307 HNRNPUQ00839 825 aaKnown RBP eCLIP24.64■■□□□ 1.54
UBE2D3-220ENST00000505307 ERICH6Q7L0X2 663 aa24.64■■□□□ 1.54
UBE2D3-220ENST00000505307 PNMA6EA0A0J9YXQ4 647 aa24.63■■□□□ 1.53
UBE2D3-220ENST00000505307 BTBD19C9JJ37 291 aa24.63■■□□□ 1.53
UBE2D3-220ENST00000505307 TLR2O60603 784 aa24.63■■□□□ 1.53
UBE2D3-220ENST00000505307 RGS3P49796 1198 aa24.63■■□□□ 1.53
UBE2D3-220ENST00000505307 TMEM57Q8N5G2 664 aa24.63■■□□□ 1.53
UBE2D3-220ENST00000505307 TNNQ9UQP3 1299 aa24.63■■□□□ 1.53
UBE2D3-220ENST00000505307 PDE4DIPQ5VU43 2346 aa24.62■■□□□ 1.53
UBE2D3-220ENST00000505307 MAP4K4O95819 1239 aaPredicted RBP24.62■■□□□ 1.53
UBE2D3-220ENST00000505307 KCNH4Q9UQ05 1017 aa24.62■■□□□ 1.53
UBE2D3-220ENST00000505307 MROH7-TTC4A0A0A0MT08 1334 aa24.61■■□□□ 1.53
UBE2D3-220ENST00000505307 AK9Q5TCS8 1911 aa24.61■■□□□ 1.53
UBE2D3-220ENST00000505307 MYH2Q9UKX2 1941 aa24.61■■□□□ 1.53
UBE2D3-220ENST00000505307 LDHCP07864 332 aa24.61■■□□□ 1.53
UBE2D3-220ENST00000505307 GSTO1P78417 241 aa24.61■■□□□ 1.53
UBE2D3-220ENST00000505307 SPATA5Q8NB90 893 aa24.61■■□□□ 1.53
UBE2D3-220ENST00000505307 HMG20BQ9P0W2 317 aa24.61■■□□□ 1.53
UBE2D3-220ENST00000505307 GPR75-ASB3A0A0A6YYF3 556 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 NPM3O75607 178 aaKnown RBP24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 UQCRFS1P1P0C7P4 283 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 ARID4AP29374 1257 aaPredicted RBP24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 BTDP43251 543 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 MECOMQ03112 1051 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 KIF22Q14807 665 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 ANKRD23Q86SG2 305 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 ZFPM1Q8IX07 1006 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 MIER1Q8N108 512 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 ARMC5Q96C12 935 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 GPR108Q9NPR9 543 aa24.6■■□□□ 1.53
UBE2D3-220ENST00000505307 TNRC18O15417 2968 aaPredicted RBP24.59■■□□□ 1.53
UBE2D3-220ENST00000505307 RFX7Q2KHR2 1363 aa24.59■■□□□ 1.53
UBE2D3-220ENST00000505307 CXCL11O14625 94 aa24.59■■□□□ 1.53
UBE2D3-220ENST00000505307 MAP3K10Q02779 954 aa24.59■■□□□ 1.53
UBE2D3-220ENST00000505307 POLA2Q14181 598 aa24.59■■□□□ 1.53
UBE2D3-220ENST00000505307 DIEXFQ68CQ4 756 aaKnown RBP24.59■■□□□ 1.53
UBE2D3-220ENST00000505307 ZSCAN29Q8IWY8 852 aaPredicted RBP24.59■■□□□ 1.53
UBE2D3-220ENST00000505307 FTSJ3Q8IY81 847 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms