RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 LNPKQ9C0E8 428 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 NDE1Q9NXR1 346 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 KRT4P19013 534 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 ZNF75DP51815 510 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 CFAP221Q4G0U5 840 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 ZBTB41Q5SVQ8 909 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 MAATS1Q7Z4T9 603 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 CIDEBQ9UHD4 219 aa6.81□□□□□ -1.32
LINC02397-201ENST00000504409 EIF4G3O43432 1585 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 ARHGEF5Q12774 1597 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 LSM1O15116 133 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 CCDC14Q49A88 953 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 SLC30A9Q6PML9 568 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 MSANTD4Q8NCY6 345 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 GRAMD1AQ96CP6 724 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 BAG1Q99933 345 aaPredicted RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 A1CFQ9NQ94 594 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 KLHL14Q9P2G3 628 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 STOML1Q9UBI4 398 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 SAMD9LQ8IVG5 1584 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 XPO1O14980 1071 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 ESRRGP62508 458 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 PPP1R21Q6ZMI0 780 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 MLKLQ8NB16 471 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 ANKRD7Q92527 254 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 KIFAP3Q92845 792 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 KIFC3Q9BVG8 833 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 TM6SF1Q9BZW5 370 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 KIF9Q9HAQ2 790 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 CLTAP09496 248 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 RAD51AP2Q09MP3 1159 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 MUM1Q2TAK8 710 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 PDP2Q9P2J9 529 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 CETN3O15182 167 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 C9orf78Q9NZ63 289 aaPredicted RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 RARSP54136 660 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 CUL3Q13618 768 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 ZNF449Q6P9G9 518 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 CCDC84Q86UT8 332 aaPredicted RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 CXorf56Q9H5V9 222 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 UBN2Q6ZU65 1347 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 LRRIQ3A6PVS8 624 aaPredicted RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 STXBP3O00186 592 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 IKBKBO14920 756 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 CYTH3O43739 400 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 MYL5Q02045 173 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 TMC6Q7Z403 805 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 SIL1Q9H173 461 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 A0A0G2JS52 829 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 APAF1O14727 1248 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 TCP1P17987 556 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 CCDC96Q2M329 555 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 CLSTN2Q9H4D0 955 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 TYW1Q9NV66 732 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 DIS3Q9Y2L1 958 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 ADGRL3Q9HAR2 1447 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 LRRIQ1Q96JM4 1722 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 HSPA9P38646 679 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 MFN1Q8IWA4 741 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 NAP1L4Q99733 375 aaKnown RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 RNF41Q9H4P4 317 aaPredicted RBP6.8□□□□□ -1.32
LINC02397-201ENST00000504409 HAUS4Q9H6D7 363 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 SYCP2Q9BX26 1530 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 LAMC3Q9Y6N6 1575 aa6.8□□□□□ -1.32
LINC02397-201ENST00000504409 ETF1P62495 437 aaKnown RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 MAP3K12Q12852 859 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 NONOQ15233 471 aaKnown RBP eCLIP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 BHMTQ93088 406 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 COG3Q96JB2 828 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 STRN4Q9NRL3 753 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 CTNNAL1Q9UBT7 734 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 RTL1A6NKG5 1358 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 SUN1O94901 812 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 GAS8O95995 478 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 KRT5P13647 590 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 PHBP35232 272 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 BRPF1P55201 1214 aaPredicted RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 RBM6P78332 1123 aaKnown RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 UTP11Q9Y3A2 253 aaKnown RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 A0A087WZG4 1122 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 AKR1B15C9JRZ8 316 aaPredicted RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 N4BP2L2Q92802 583 aaPredicted RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 TRIM63Q969Q1 353 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 JADE2Q9NQC1 790 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 SPDYE4A6NLX3 237 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 TDRD7Q8NHU6 1098 aaKnown RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 PPIP5K1Q6PFW1 1433 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 PRIM1P49642 420 aaKnown RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 SPAG5Q96R06 1193 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 CARMIL3Q8ND23 1372 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 RIPK4P57078 832 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 A0A1B0GVL5 298 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 WDHD1O75717 1129 aaPredicted RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 KRT2P35908 639 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 TSNARE1Q96NA8 513 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 RPL26L1Q9UNX3 145 aaKnown RBP6.79□□□□□ -1.32
LINC02397-201ENST00000504409 RAPGEF6Q8TEU7 1601 aa6.79□□□□□ -1.32
LINC02397-201ENST00000504409 MARCH6O60337 910 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms