RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 ANO6Q4KMQ2 910 aa16.99■□□□□ 0.31
NEAT1-201ENST00000499732 PI16Q6UXB8 463 aa16.99■□□□□ 0.31
NEAT1-201ENST00000499732 HELLSQ9NRZ9 838 aa16.99■□□□□ 0.31
NEAT1-201ENST00000499732 RNF113AO15541 343 aaKnown RBP16.98■□□□□ 0.31
NEAT1-201ENST00000499732 ARID4AP29374 1257 aaPredicted RBP16.98■□□□□ 0.31
NEAT1-201ENST00000499732 CRY2Q49AN0 593 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 CCDC102BQ68D86 513 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 LUZP1Q86V48 1076 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 ZSCAN16Q9H4T2 348 aaPredicted RBP16.98■□□□□ 0.31
NEAT1-201ENST00000499732 PRDM4Q9UKN5 801 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 KLRG2A4D1S0 409 aaPredicted RBP16.98■□□□□ 0.31
NEAT1-201ENST00000499732 RIOK3O14730 519 aaKnown RBP16.98■□□□□ 0.31
NEAT1-201ENST00000499732 SLC5A1P13866 664 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 PTGS1P23219 599 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 CDC25BP30305 580 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 PHKA1P46020 1223 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 CAMK4Q16566 473 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 ANKRD7Q92527 254 aa16.98■□□□□ 0.31
NEAT1-201ENST00000499732 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
NEAT1-201ENST00000499732 DOCK2Q92608 1830 aa16.97■□□□□ 0.31
NEAT1-201ENST00000499732 SNAP23O00161 211 aa16.97■□□□□ 0.31
NEAT1-201ENST00000499732 ZNF75DP51815 510 aa16.97■□□□□ 0.31
NEAT1-201ENST00000499732 CHRNDQ07001 517 aa16.97■□□□□ 0.31
NEAT1-201ENST00000499732 RESTQ13127 1097 aa16.97■□□□□ 0.31
NEAT1-201ENST00000499732 SYCP1Q15431 976 aa16.97■□□□□ 0.31
NEAT1-201ENST00000499732 FAM173BQ6P4H8 233 aa16.97■□□□□ 0.31
NEAT1-201ENST00000499732 MAST3O60307 1309 aa16.97■□□□□ 0.31
NEAT1-201ENST00000499732 UTP14CQ5TAP6 766 aaKnown RBP16.96■□□□□ 0.31
NEAT1-201ENST00000499732 CKAP2LQ8IYA6 745 aa16.96■□□□□ 0.31
NEAT1-201ENST00000499732 BRIP1Q9BX63 1249 aa16.96■□□□□ 0.31
NEAT1-201ENST00000499732 CFAP45Q9UL16 551 aa16.96■□□□□ 0.31
NEAT1-201ENST00000499732 U3KPZ7 1027 aaPredicted RBP16.96■□□□□ 0.31
NEAT1-201ENST00000499732 DTNBO60941 627 aa16.96■□□□□ 0.3
NEAT1-201ENST00000499732 UQCRFS1P1P0C7P4 283 aa16.96■□□□□ 0.3
NEAT1-201ENST00000499732 TGFB2P61812 414 aa16.96■□□□□ 0.3
NEAT1-201ENST00000499732 COL9A3Q14050 684 aaPredicted RBP16.96■□□□□ 0.3
NEAT1-201ENST00000499732 BICD2Q8TD16 824 aa16.96■□□□□ 0.3
NEAT1-201ENST00000499732 RPGRQ92834 1020 aaKnown RBP16.96■□□□□ 0.3
NEAT1-201ENST00000499732 NEK1Q96PY6 1258 aa16.96■□□□□ 0.3
NEAT1-201ENST00000499732 TAF6LQ9Y6J9 622 aa16.96■□□□□ 0.3
NEAT1-201ENST00000499732 ANKRD31Q8N7Z5 1873 aa16.96■□□□□ 0.3
NEAT1-201ENST00000499732 ZFYP08048 801 aaPredicted RBP16.95■□□□□ 0.3
NEAT1-201ENST00000499732 GRAPQ13588 217 aa16.95■□□□□ 0.3
NEAT1-201ENST00000499732 LRRFIP1Q32MZ4 808 aaKnown RBP16.95■□□□□ 0.3
NEAT1-201ENST00000499732 CCDC186Q7Z3E2 898 aa16.95■□□□□ 0.3
NEAT1-201ENST00000499732 GRAPLQ8TC17 118 aaPredicted RBP16.95■□□□□ 0.3
NEAT1-201ENST00000499732 TSC1Q92574 1164 aa16.95■□□□□ 0.3
NEAT1-201ENST00000499732 PGBD1Q96JS3 809 aa16.95■□□□□ 0.3
NEAT1-201ENST00000499732 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
NEAT1-201ENST00000499732 LLPHQ9BRT6 129 aaKnown RBP16.95■□□□□ 0.3
NEAT1-201ENST00000499732 M0R2C6 588 aa16.94■□□□□ 0.3
NEAT1-201ENST00000499732 CTAGE5O15320 804 aa16.94■□□□□ 0.3
NEAT1-201ENST00000499732 NR1I2O75469 434 aa16.94■□□□□ 0.3
NEAT1-201ENST00000499732 HOXA10P31260 410 aaPredicted RBP16.94■□□□□ 0.3
NEAT1-201ENST00000499732 ZNF165P49910 485 aa16.94■□□□□ 0.3
NEAT1-201ENST00000499732 SARM1Q6SZW1 724 aa16.94■□□□□ 0.3
NEAT1-201ENST00000499732 PDCL2Q8N4E4 241 aa16.94■□□□□ 0.3
NEAT1-201ENST00000499732 OSBP2Q969R2 916 aa16.94■□□□□ 0.3
NEAT1-201ENST00000499732 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
NEAT1-201ENST00000499732 TRIM5Q9C035 493 aa16.94■□□□□ 0.3
NEAT1-201ENST00000499732 MINPP1Q9UNW1 487 aa16.94■□□□□ 0.3
NEAT1-201ENST00000499732 SMTNL1A8MU46 457 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 STK3Q13188 491 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 ZSCAN25Q6NSZ9 544 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 SMARCC2Q8TAQ2 1214 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 BRF1Q92994 677 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 ARID3AQ99856 593 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 DSCC1Q9BVC3 393 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 ANKRD2Q9GZV1 360 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 TFIP11Q9UBB9 837 aaKnown RBP16.93■□□□□ 0.3
NEAT1-201ENST00000499732 H3BQV1 296 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 HMGB1P09429 215 aaKnown RBP16.93■□□□□ 0.3
NEAT1-201ENST00000499732 TTF1Q15361 905 aaPredicted RBP16.93■□□□□ 0.3
NEAT1-201ENST00000499732 PPP4R3BQ5MIZ7 849 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 IFFO2Q5TF58 517 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 CRAMP1Q96RY5 1269 aa16.93■□□□□ 0.3
NEAT1-201ENST00000499732 PIH1D3Q9NQM4 214 aaKnown RBP16.93■□□□□ 0.3
NEAT1-201ENST00000499732 NEMFO60524 1076 aa16.92■□□□□ 0.3
NEAT1-201ENST00000499732 PDE6BP35913 854 aa16.92■□□□□ 0.3
NEAT1-201ENST00000499732 DMTNQ08495 405 aa16.92■□□□□ 0.3
NEAT1-201ENST00000499732 RASGRF1Q13972 1273 aa16.92■□□□□ 0.3
NEAT1-201ENST00000499732 UBE4AQ14139 1066 aa16.92■□□□□ 0.3
NEAT1-201ENST00000499732 ATL3Q6DD88 541 aa16.92■□□□□ 0.3
NEAT1-201ENST00000499732 NAA16Q6N069 864 aaPredicted RBP16.92■□□□□ 0.3
NEAT1-201ENST00000499732 Q6ZUG5 572 aa16.92■□□□□ 0.3
NEAT1-201ENST00000499732 APPBP2Q92624 585 aa16.92■□□□□ 0.3
NEAT1-201ENST00000499732 GPBP1L1Q9HC44 474 aaPredicted RBP16.92■□□□□ 0.3
NEAT1-201ENST00000499732 PAXBP1Q9Y5B6 917 aa16.92■□□□□ 0.3
NEAT1-201ENST00000499732 COL11A2P13942 1736 aaPredicted RBP16.92■□□□□ 0.3
NEAT1-201ENST00000499732 JAK2O60674 1132 aa16.91■□□□□ 0.3
NEAT1-201ENST00000499732 BBOX1O75936 387 aa16.91■□□□□ 0.3
NEAT1-201ENST00000499732 HSPD1P10809 573 aaKnown RBP16.91■□□□□ 0.3
NEAT1-201ENST00000499732 SPATA5Q8NB90 893 aa16.91■□□□□ 0.3
NEAT1-201ENST00000499732 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.91■□□□□ 0.3
NEAT1-201ENST00000499732 DNAJC25Q9H1X3 360 aa16.91■□□□□ 0.3
NEAT1-201ENST00000499732 CLIP2Q9UDT6 1046 aa16.91■□□□□ 0.3
NEAT1-201ENST00000499732 CYP21A2P08686 494 aa16.91■□□□□ 0.3
NEAT1-201ENST00000499732 ADD2P35612 726 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms