RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 DZIP1Q86YF9 867 aaKnown RBP24.28■■□□□ 1.48
CTSD-206ENST00000497544 TRIM6-TRIM34B2RNG4 842 aa24.27■■□□□ 1.48
CTSD-206ENST00000497544 IGSF3O75054 1194 aa24.27■■□□□ 1.48
CTSD-206ENST00000497544 SLF2Q8IX21 1173 aa24.27■■□□□ 1.48
CTSD-206ENST00000497544 MYO5AQ9Y4I1 1855 aaKnown RBP24.26■■□□□ 1.47
CTSD-206ENST00000497544 SHTN1A0MZ66 631 aa24.26■■□□□ 1.47
CTSD-206ENST00000497544 RBM5P52756 815 aaKnown RBP eCLIP24.26■■□□□ 1.47
CTSD-206ENST00000497544 HDLBPQ00341 1268 aaKnown RBP24.26■■□□□ 1.47
CTSD-206ENST00000497544 NOGQ13253 232 aa24.26■■□□□ 1.47
CTSD-206ENST00000497544 RBM26Q5T8P6 1007 aaKnown RBP24.26■■□□□ 1.47
CTSD-206ENST00000497544 EVI5LQ96CN4 794 aa24.26■■□□□ 1.47
CTSD-206ENST00000497544 MRIQ9BWK5 157 aa24.26■■□□□ 1.47
CTSD-206ENST00000497544 LDHCP07864 332 aa24.25■■□□□ 1.47
CTSD-206ENST00000497544 ZNF280AP59817 542 aaPredicted RBP24.25■■□□□ 1.47
CTSD-206ENST00000497544 GSTO1P78417 241 aa24.25■■□□□ 1.47
CTSD-206ENST00000497544 MECOMQ03112 1051 aa24.25■■□□□ 1.47
CTSD-206ENST00000497544 RILPL2Q969X0 211 aa24.25■■□□□ 1.47
CTSD-206ENST00000497544 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.25■■□□□ 1.474e-7■■■□□ 16.7
CTSD-206ENST00000497544 CFAP100Q494V2 611 aa24.24■■□□□ 1.47
CTSD-206ENST00000497544 TTC22Q5TAA0 569 aa24.24■■□□□ 1.47
CTSD-206ENST00000497544 NAA16Q6N069 864 aaPredicted RBP24.24■■□□□ 1.47
CTSD-206ENST00000497544 SAMD7Q7Z3H4 446 aa24.24■■□□□ 1.47
CTSD-206ENST00000497544 KBTBD3Q8NAB2 608 aa24.24■■□□□ 1.47
CTSD-206ENST00000497544 TEKT1Q969V4 418 aa24.24■■□□□ 1.47
CTSD-206ENST00000497544 NSUN4Q96CB9 384 aaKnown RBP24.24■■□□□ 1.47
CTSD-206ENST00000497544 MYOZ2Q9NPC6 264 aa24.24■■□□□ 1.47
CTSD-206ENST00000497544 ADARB2Q9NS39 739 aaKnown RBP24.24■■□□□ 1.47
CTSD-206ENST00000497544 CRKP46108 304 aa24.23■■□□□ 1.47
CTSD-206ENST00000497544 DLGAP5Q15398 846 aa24.23■■□□□ 1.47
CTSD-206ENST00000497544 LRRFIP1Q32MZ4 808 aaKnown RBP24.23■■□□□ 1.47
CTSD-206ENST00000497544 TBC1D10BQ4KMP7 808 aaPredicted RBP24.23■■□□□ 1.47
CTSD-206ENST00000497544 ZSCAN25Q6NSZ9 544 aa24.23■■□□□ 1.47
CTSD-206ENST00000497544 HHIPL2Q6UWX4 724 aa24.23■■□□□ 1.47
CTSD-206ENST00000497544 GLIS2Q9BZE0 524 aaPredicted RBP24.23■■□□□ 1.47
CTSD-206ENST00000497544 SERPINA10Q9UK55 444 aa24.23■■□□□ 1.47
CTSD-206ENST00000497544 MYH2Q9UKX2 1941 aa24.22■■□□□ 1.47
CTSD-206ENST00000497544 DIXDC1Q155Q3 683 aa24.22■■□□□ 1.47
CTSD-206ENST00000497544 SLC9C2Q5TAH2 1124 aa24.22■■□□□ 1.47
CTSD-206ENST00000497544 MAGEB6Q8N7X4 407 aa24.22■■□□□ 1.47
CTSD-206ENST00000497544 FSD1Q9BTV5 496 aa24.22■■□□□ 1.47
CTSD-206ENST00000497544 SAGE1Q9NXZ1 904 aa24.22■■□□□ 1.47
CTSD-206ENST00000497544 CYP7A1P22680 504 aa24.21■■□□□ 1.47
CTSD-206ENST00000497544 KIF4BQ2VIQ3 1234 aa24.21■■□□□ 1.47
CTSD-206ENST00000497544 TMED8Q6PL24 325 aaPredicted RBP24.21■■□□□ 1.47
CTSD-206ENST00000497544 ZNF408Q9H9D4 720 aa24.21■■□□□ 1.47
CTSD-206ENST00000497544 HPS5Q9UPZ3 1129 aa24.21■■□□□ 1.47
CTSD-206ENST00000497544 CTU1Q7Z7A3 348 aaKnown RBP24.2■■□□□ 1.46
CTSD-206ENST00000497544 FAM163AQ96GL9 167 aaPredicted RBP24.2■■□□□ 1.46
CTSD-206ENST00000497544 DOCK2Q92608 1830 aa24.19■■□□□ 1.46
CTSD-206ENST00000497544 ZFYP08048 801 aaPredicted RBP24.19■■□□□ 1.46
CTSD-206ENST00000497544 PDE6AP16499 860 aa24.19■■□□□ 1.46
CTSD-206ENST00000497544 MTMR14Q8NCE2 650 aa24.19■■□□□ 1.46
CTSD-206ENST00000497544 TRPM4Q8TD43 1214 aa24.19■■□□□ 1.46
CTSD-206ENST00000497544 ZDHHC15Q96MV8 337 aa24.19■■□□□ 1.46
CTSD-206ENST00000497544 NOL10Q9BSC4 688 aaKnown RBP24.19■■□□□ 1.46
CTSD-206ENST00000497544 GSPT1P15170 499 aaKnown RBP24.18■■□□□ 1.46
CTSD-206ENST00000497544 ADD2P35612 726 aa24.18■■□□□ 1.46
CTSD-206ENST00000497544 ZNF384Q8TF68 577 aa24.18■■□□□ 1.46
CTSD-206ENST00000497544 PRMT6Q96LA8 375 aaPredicted RBP24.18■■□□□ 1.46
CTSD-206ENST00000497544 DAGLAQ9Y4D2 1042 aa24.18■■□□□ 1.46
CTSD-206ENST00000497544 PCDHAC2Q9Y5I4 1007 aa24.18■■□□□ 1.46
CTSD-206ENST00000497544 MYH7P12883 1935 aa24.18■■□□□ 1.46
CTSD-206ENST00000497544 MROH7-TTC4A0A0A0MT08 1334 aa24.17■■□□□ 1.46
CTSD-206ENST00000497544 ZNF532Q9HCE3 1301 aa24.17■■□□□ 1.46
CTSD-206ENST00000497544 WNT10BO00744 389 aa24.17■■□□□ 1.46
CTSD-206ENST00000497544 RNF113AO15541 343 aaKnown RBP24.17■■□□□ 1.46
CTSD-206ENST00000497544 MYO1BO43795 1136 aa24.17■■□□□ 1.46
CTSD-206ENST00000497544 EGFRP00533 1210 aa24.17■■□□□ 1.46
CTSD-206ENST00000497544 SDSP20132 328 aa24.17■■□□□ 1.46
CTSD-206ENST00000497544 FXR1P51114 621 aaKnown RBP eCLIP24.17■■□□□ 1.46
CTSD-206ENST00000497544 UBE3CQ15386 1083 aa24.17■■□□□ 1.46
CTSD-206ENST00000497544 AK9Q5TCS8 1911 aa24.17■■□□□ 1.46
CTSD-206ENST00000497544 GAKO14976 1311 aa24.16■■□□□ 1.46
CTSD-206ENST00000497544 SPDYE2BA6NHP3 402 aa24.16■■□□□ 1.46
CTSD-206ENST00000497544 TRPA1O75762 1119 aa24.16■■□□□ 1.46
CTSD-206ENST00000497544 BAG3O95817 575 aa24.16■■□□□ 1.46
CTSD-206ENST00000497544 SPDYE6P0CI01 402 aa24.16■■□□□ 1.46
CTSD-206ENST00000497544 HIRAP54198 1017 aaPredicted RBP24.16■■□□□ 1.46
CTSD-206ENST00000497544 NBPF9Q3BBW0 867 aa24.16■■□□□ 1.46
CTSD-206ENST00000497544 RNF186Q9NXI6 227 aa24.16■■□□□ 1.46
CTSD-206ENST00000497544 GPR75-ASB3A0A0A6YYF3 556 aa24.15■■□□□ 1.46
CTSD-206ENST00000497544 FAM155AB1AL88 458 aaPredicted RBP24.15■■□□□ 1.46
CTSD-206ENST00000497544 APOBEC3HQ6NTF7 200 aaKnown RBP24.15■■□□□ 1.46
CTSD-206ENST00000497544 TICAM2Q86XR7 235 aa24.15■■□□□ 1.46
CTSD-206ENST00000497544 ZBED3Q96IU2 234 aaPredicted RBP24.15■■□□□ 1.46
CTSD-206ENST00000497544 TDRD3Q9H7E2 651 aaKnown RBP24.15■■□□□ 1.46
CTSD-206ENST00000497544 MKI67P46013 3256 aaKnown RBP24.15■■□□□ 1.46
CTSD-206ENST00000497544 TCRBV5S4A2TA0A5A2 114 aa24.14■■□□□ 1.45
CTSD-206ENST00000497544 BTDP43251 543 aa24.14■■□□□ 1.45
CTSD-206ENST00000497544 HUNKP57058 714 aa24.14■■□□□ 1.45
CTSD-206ENST00000497544 BMP2KLQ5H9B9 411 aa24.14■■□□□ 1.45
CTSD-206ENST00000497544 SLFNL1Q499Z3 407 aa24.13■■□□□ 1.45
CTSD-206ENST00000497544 ADGRA1Q86SQ6 560 aa24.13■■□□□ 1.45
CTSD-206ENST00000497544 USP40Q9NVE5 1235 aa24.13■■□□□ 1.45
CTSD-206ENST00000497544 AATFQ9NY61 560 aaKnown RBP eCLIP24.13■■□□□ 1.45
CTSD-206ENST00000497544 PGAP2Q9UHJ9 254 aa24.13■■□□□ 1.45
CTSD-206ENST00000497544 MAST2Q6P0Q8 1798 aa24.13■■□□□ 1.45
CTSD-206ENST00000497544 HIP1O00291 1037 aa24.12■■□□□ 1.45
CTSD-206ENST00000497544 PPP4CP60510 307 aa24.12■■□□□ 1.45
CTSD-206ENST00000497544 ZC3H15Q8WU90 426 aaKnown RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms