RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
RER1-207ENST00000488353 TCIRG1Q13488 830 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 DPCR1Q3MIW9 517 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 IQUBQ8NA54 791 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 MRPS27Q92552 414 aaKnown RBP16.37■□□□□ 0.21
RER1-207ENST00000488353 CCDC34Q96HJ3 373 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 MPHOSPH8Q99549 860 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 ISCA1Q9BUE6 129 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 LCMT1Q9UIC8 334 aa16.37■□□□□ 0.21
RER1-207ENST00000488353 ZSCAN12O43309 604 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 STARD3NLO95772 234 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 HSPD1P10809 573 aaKnown RBP16.36■□□□□ 0.21
RER1-207ENST00000488353 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 SYNE4Q8N205 404 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 ITGB4P16144 1822 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 HMGB1P09429 215 aaKnown RBP16.36■□□□□ 0.21
RER1-207ENST00000488353 IFIT1P09914 478 aaKnown RBP16.36■□□□□ 0.21
RER1-207ENST00000488353 GPTP24298 496 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 HLFQ16534 295 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 ADALQ6DHV7 355 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 FCHSD1Q86WN1 690 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 GOLGA6L1Q8N7Z2 621 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 FUT8Q9BYC5 575 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 RFX7Q2KHR2 1363 aa16.36■□□□□ 0.21
RER1-207ENST00000488353 COL14A1Q05707 1796 aaKnown RBP16.36■□□□□ 0.21
RER1-207ENST00000488353 COL16A1Q07092 1604 aaPredicted RBP16.35■□□□□ 0.21
RER1-207ENST00000488353 ACTN2P35609 894 aa16.35■□□□□ 0.21
RER1-207ENST00000488353 LMAN1P49257 510 aa16.35■□□□□ 0.21
RER1-207ENST00000488353 EXOSC10Q01780 885 aaKnown RBP16.35■□□□□ 0.21
RER1-207ENST00000488353 GPHNQ9NQX3 736 aaPredicted RBP16.35■□□□□ 0.21
RER1-207ENST00000488353 RRP15Q9Y3B9 282 aaKnown RBP16.35■□□□□ 0.21
RER1-207ENST00000488353 FANCGO15287 622 aa16.35■□□□□ 0.21
RER1-207ENST00000488353 FKBP4Q02790 459 aaKnown RBP eCLIP16.35■□□□□ 0.213e-6■■□□□ 11.4
RER1-207ENST00000488353 ZMYM1Q5SVZ6 1142 aa16.35■□□□□ 0.21
RER1-207ENST00000488353 JAKMIP3Q5VZ66 844 aa16.35■□□□□ 0.21
RER1-207ENST00000488353 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
RER1-207ENST00000488353 TEX13AQ9BXU3 409 aaPredicted RBP16.35■□□□□ 0.21
RER1-207ENST00000488353 TMX1Q9H3N1 280 aa16.35■□□□□ 0.21
RER1-207ENST00000488353 BCL9O00512 1426 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 MAST3O60307 1309 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 A0A1W2PQ27 194 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 A0A1W2PQ64 194 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 A0A1W2PQD8 194 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 MAP3K9P80192 1104 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
RER1-207ENST00000488353 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
RER1-207ENST00000488353 RABGGTAQ92696 567 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 DSCC1Q9BVC3 393 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 UTP14AQ9BVJ6 771 aaKnown RBP16.34■□□□□ 0.21
RER1-207ENST00000488353 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 A0A1B0GUL7 405 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 M0R2C6 588 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 EYA2O00167 538 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 IVLP07476 585 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 PDIA3P30101 505 aaKnown RBP16.34■□□□□ 0.21
RER1-207ENST00000488353 HAND2P61296 217 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 FANCCQ00597 558 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 GNL2Q13823 731 aaKnown RBP16.34■□□□□ 0.21
RER1-207ENST00000488353 EPC1Q9H2F5 836 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 PCDHA7Q9UN72 937 aa16.34■□□□□ 0.21
RER1-207ENST00000488353 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
RER1-207ENST00000488353 IL15P40933 162 aaPredicted RBP16.33■□□□□ 0.2
RER1-207ENST00000488353 PIP4K2BP78356 416 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 NCAPHQ15003 741 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 LEKR1Q6ZMV7 388 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 RSRC2Q7L4I2 434 aaKnown RBP16.33■□□□□ 0.2
RER1-207ENST00000488353 PARD6BQ9BYG5 372 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 A0A1B0GVL5 298 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 GOLGA6L9A6NEM1 432 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
RER1-207ENST00000488353 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
RER1-207ENST00000488353 IKBKBO14920 756 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 CYP19A1P11511 503 aaPredicted RBP16.33■□□□□ 0.2
RER1-207ENST00000488353 NLRP12P59046 1061 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 HSP90AB3PQ58FF7 597 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 RAB11FIP4Q86YS3 637 aa16.33■□□□□ 0.2
RER1-207ENST00000488353 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
RER1-207ENST00000488353 CCDC151A5D8V7 595 aa16.32■□□□□ 0.2
RER1-207ENST00000488353 CBFA2T2O43439 604 aa16.32■□□□□ 0.2
RER1-207ENST00000488353 PPP2R3AQ06190 1150 aa16.32■□□□□ 0.2
RER1-207ENST00000488353 CCDC57Q2TAC2 916 aa16.32■□□□□ 0.2
RER1-207ENST00000488353 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
RER1-207ENST00000488353 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
RER1-207ENST00000488353 NDUFA8P51970 172 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 GTF2A1P52655 376 aaPredicted RBP16.31■□□□□ 0.2
RER1-207ENST00000488353 ICE2Q659A1 982 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 ILDR1Q86SU0 546 aaPredicted RBP16.31■□□□□ 0.2
RER1-207ENST00000488353 OSBP2Q969R2 916 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 ACSBG1Q96GR2 724 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 VWA3AA6NCI4 1184 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 ARHGAP6O43182 974 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 LMOD1P29536 600 aaPredicted RBP16.31■□□□□ 0.2
RER1-207ENST00000488353 GYS2P54840 703 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 LONRF2Q1L5Z9 754 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 GIGYF2Q6Y7W6 1299 aaKnown RBP16.31■□□□□ 0.2
RER1-207ENST00000488353 GEMIN8Q9NWZ8 242 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms