RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 GSX1Q9H4S2 264 aaPredicted RBP8.5□□□□□ -1.05
SMC4-219ENST00000487747 CCDC86Q9H6F5 360 aaKnown RBP8.5□□□□□ -1.05
SMC4-219ENST00000487747 ASPAP45381 313 aa8.49□□□□□ -1.05
SMC4-219ENST00000487747 SEZ6L2Q6UXD5 910 aa8.49□□□□□ -1.05
SMC4-219ENST00000487747 GIMAP7Q8NHV1 300 aa8.49□□□□□ -1.05
SMC4-219ENST00000487747 YIPF2Q9BWQ6 316 aa8.49□□□□□ -1.05
SMC4-219ENST00000487747 C1GALT1Q9NS00 363 aa8.49□□□□□ -1.05
SMC4-219ENST00000487747 FCGRTP55899 365 aa8.48□□□□□ -1.05
SMC4-219ENST00000487747 ZNF765Q7L2R6 523 aa8.48□□□□□ -1.05
SMC4-219ENST00000487747 DDX54Q8TDD1 881 aaKnown RBP8.48□□□□□ -1.05
SMC4-219ENST00000487747 CCDC39Q9UFE4 941 aa8.48□□□□□ -1.05
SMC4-219ENST00000487747 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.47□□□□□ -1.05
SMC4-219ENST00000487747 CYP26A1O43174 497 aa8.47□□□□□ -1.05
SMC4-219ENST00000487747 ZNF862O60290 1169 aa8.47□□□□□ -1.05
SMC4-219ENST00000487747 AP3B2Q13367 1082 aa8.47□□□□□ -1.05
SMC4-219ENST00000487747 RPS26P11Q5JNZ5 115 aaPredicted RBP8.47□□□□□ -1.05
SMC4-219ENST00000487747 ABI1Q8IZP0 508 aa8.47□□□□□ -1.05
SMC4-219ENST00000487747 ZFYVE1Q9HBF4 777 aa8.47□□□□□ -1.05
SMC4-219ENST00000487747 BIN2Q9UBW5 565 aaPredicted RBP8.47□□□□□ -1.05
SMC4-219ENST00000487747 ADGRE2Q9UHX3 823 aa8.47□□□□□ -1.05
SMC4-219ENST00000487747 TIMELESSQ9UNS1 1208 aa8.47□□□□□ -1.05
SMC4-219ENST00000487747 DAGLAQ9Y4D2 1042 aa8.47□□□□□ -1.05
SMC4-219ENST00000487747 TMPRSS2O15393 492 aa8.46□□□□□ -1.06
SMC4-219ENST00000487747 MAP7Q14244 749 aa8.46□□□□□ -1.06
SMC4-219ENST00000487747 DSC3Q14574 896 aa8.46□□□□□ -1.06
SMC4-219ENST00000487747 HP1BP3Q5SSJ5 553 aaPredicted RBP8.46□□□□□ -1.06
SMC4-219ENST00000487747 STK35Q8TDR2 534 aa8.46□□□□□ -1.06
SMC4-219ENST00000487747 METTL22Q9BUU2 404 aaPredicted RBP8.46□□□□□ -1.06
SMC4-219ENST00000487747 BCO2Q9BYV7 579 aa8.46□□□□□ -1.06
SMC4-219ENST00000487747 TRAK1Q9UPV9 953 aa8.46□□□□□ -1.06
SMC4-219ENST00000487747 GNEQ9Y223 722 aaKnown RBP8.46□□□□□ -1.06
SMC4-219ENST00000487747 COL19A1Q14993 1142 aa8.45□□□□□ -1.06
SMC4-219ENST00000487747 CPSF6Q16630 551 aaKnown RBP eCLIP8.45□□□□□ -1.062e-6■□□□□ 10
SMC4-219ENST00000487747 DTHD1Q6ZMT9 781 aa8.45□□□□□ -1.06
SMC4-219ENST00000487747 LRRC4CQ9HCJ2 640 aa8.45□□□□□ -1.06
SMC4-219ENST00000487747 ZC3H7BQ9UGR2 993 aaKnown RBP8.45□□□□□ -1.06
SMC4-219ENST00000487747 GSTP1P09211 210 aaKnown RBP8.44□□□□□ -1.06
SMC4-219ENST00000487747 NXPE4Q6UWF7 544 aa8.44□□□□□ -1.06
SMC4-219ENST00000487747 CRIM1Q9NZV1 1036 aa8.44□□□□□ -1.06
SMC4-219ENST00000487747 DCTN4Q9UJW0 460 aa8.44□□□□□ -1.06
SMC4-219ENST00000487747 PCDHGC5Q9Y5F6 944 aa8.44□□□□□ -1.06
SMC4-219ENST00000487747 PRNPP04156 253 aa8.43□□□□□ -1.06
SMC4-219ENST00000487747 PDE4CQ08493 712 aa8.43□□□□□ -1.06
SMC4-219ENST00000487747 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMC4-219ENST00000487747 PDZD3Q86UT5 571 aa8.43□□□□□ -1.06
SMC4-219ENST00000487747 FANCD2OSQ96PS1 177 aa8.43□□□□□ -1.06
SMC4-219ENST00000487747 DISC1Q9NRI5 854 aa8.43□□□□□ -1.06
SMC4-219ENST00000487747 NLRP2Q9NX02 1062 aa8.43□□□□□ -1.06
SMC4-219ENST00000487747 GPN3Q9UHW5 284 aaPredicted RBP8.43□□□□□ -1.06
SMC4-219ENST00000487747 ANGEL1Q9UNK9 670 aaKnown RBP8.43□□□□□ -1.06
SMC4-219ENST00000487747 SYNGAP1Q96PV0 1343 aa8.43□□□□□ -1.06
SMC4-219ENST00000487747 PNMA6FA0A0J9YX94 578 aa8.42□□□□□ -1.06
SMC4-219ENST00000487747 CDK5R2Q13319 367 aa8.42□□□□□ -1.06
SMC4-219ENST00000487747 DUSP27Q5VZP5 1158 aa8.42□□□□□ -1.06
SMC4-219ENST00000487747 SETDB2Q96T68 719 aa8.42□□□□□ -1.06
SMC4-219ENST00000487747 TMEM39AQ9NV64 488 aa8.42□□□□□ -1.06
SMC4-219ENST00000487747 TREHO43280 583 aa8.41□□□□□ -1.06
SMC4-219ENST00000487747 PAX4O43316 350 aa8.41□□□□□ -1.06
SMC4-219ENST00000487747 BRD1O95696 1058 aa8.41□□□□□ -1.06
SMC4-219ENST00000487747 MAPK1P28482 360 aa8.41□□□□□ -1.06
SMC4-219ENST00000487747 OGFOD3Q6PK18 319 aa8.41□□□□□ -1.06
SMC4-219ENST00000487747 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
SMC4-219ENST00000487747 FMNL2Q96PY5 1086 aa8.41□□□□□ -1.06
SMC4-219ENST00000487747 BSDC1Q9NW68 430 aaPredicted RBP8.41□□□□□ -1.06
SMC4-219ENST00000487747 AKAP2Q9Y2D5 859 aa8.41□□□□□ -1.06
SMC4-219ENST00000487747 PLCB3Q01970 1234 aa8.4□□□□□ -1.06
SMC4-219ENST00000487747 ID3Q02535 119 aa8.4□□□□□ -1.06
SMC4-219ENST00000487747 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
SMC4-219ENST00000487747 KIF4BQ2VIQ3 1234 aa8.4□□□□□ -1.06
SMC4-219ENST00000487747 C3orf58Q8NDZ4 430 aa8.4□□□□□ -1.06
SMC4-219ENST00000487747 KCNB2Q92953 911 aa8.4□□□□□ -1.06
SMC4-219ENST00000487747 U3KQE9 123 aa8.4□□□□□ -1.06
SMC4-219ENST00000487747 SLFN14P0C7P3 912 aa8.39□□□□□ -1.07
SMC4-219ENST00000487747 HCLS1P14317 486 aaPredicted RBP8.39□□□□□ -1.07
SMC4-219ENST00000487747 CYP27A1Q02318 531 aa8.39□□□□□ -1.07
SMC4-219ENST00000487747 TTLL4Q14679 1199 aa8.39□□□□□ -1.07
SMC4-219ENST00000487747 VSIG10LQ86VR7 867 aa8.39□□□□□ -1.07
SMC4-219ENST00000487747 PAK6Q9NQU5 681 aaPredicted RBP8.39□□□□□ -1.07
SMC4-219ENST00000487747 NEFMP07197 916 aa8.38□□□□□ -1.07
SMC4-219ENST00000487747 PPP2R3AQ06190 1150 aa8.38□□□□□ -1.07
SMC4-219ENST00000487747 WFDC3Q8IUB2 231 aa8.38□□□□□ -1.07
SMC4-219ENST00000487747 SULF2Q8IWU5 870 aa8.38□□□□□ -1.07
SMC4-219ENST00000487747 TP53INP2Q8IXH6 220 aa8.38□□□□□ -1.07
SMC4-219ENST00000487747 KRTAP4-7Q9BYR0 210 aa8.38□□□□□ -1.07
SMC4-219ENST00000487747 KRT82Q9NSB4 513 aa8.38□□□□□ -1.07
SMC4-219ENST00000487747 PPP4R2Q9NY27 417 aa8.38□□□□□ -1.07
SMC4-219ENST00000487747 LEFTY1O75610 366 aa8.37□□□□□ -1.07
SMC4-219ENST00000487747 FAM87AP0C7U9 286 aa8.37□□□□□ -1.07
SMC4-219ENST00000487747 MAP1SQ66K74 1059 aaPredicted RBP8.37□□□□□ -1.07
SMC4-219ENST00000487747 ZNF574Q6ZN55 896 aaPredicted RBP8.37□□□□□ -1.07
SMC4-219ENST00000487747 CBLL1Q75N03 491 aa8.37□□□□□ -1.07
SMC4-219ENST00000487747 SMYD4Q8IYR2 804 aaPredicted RBP8.37□□□□□ -1.07
SMC4-219ENST00000487747 FAM181AQ8N9Y4 354 aa8.37□□□□□ -1.07
SMC4-219ENST00000487747 OSBPL7Q9BZF2 842 aa8.37□□□□□ -1.07
SMC4-219ENST00000487747 ATXN3LQ9H3M9 355 aa8.37□□□□□ -1.07
SMC4-219ENST00000487747 PIDD1Q9HB75 910 aa8.37□□□□□ -1.07
SMC4-219ENST00000487747 WWC3Q9ULE0 1092 aa8.37□□□□□ -1.07
SMC4-219ENST00000487747 RNF114Q9Y508 228 aa8.37□□□□□ -1.07
SMC4-219ENST00000487747 RNGTTO60942 597 aaKnown RBP8.36□□□□□ -1.07
SMC4-219ENST00000487747 XRCC5P13010 732 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms