RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 ZIM2Q9NZV7 527 aa4.14□□□□□ -1.75
FXN-204ENST00000484259 R3HCC1Q9Y3T6 440 aaKnown RBP4.14□□□□□ -1.75
FXN-204ENST00000484259 PCDHB15Q9Y5E8 787 aa4.14□□□□□ -1.75
FXN-204ENST00000484259 DNMT3AQ9Y6K1 912 aaPredicted RBP4.14□□□□□ -1.75
FXN-204ENST00000484259 USP31Q70CQ4 1352 aa4.14□□□□□ -1.75
FXN-204ENST00000484259 RASSF10A6NK89 507 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 hCG_1984214I3L0E3 225 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 K7ENM7 598 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 PIK3CDO00329 1044 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 KLF4O43474 513 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 SNX2O60749 519 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 TRIM37O94972 964 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 CCDC175P0C221 793 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 NAT2P11245 290 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 TRIM27P14373 513 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 SMPD1P17405 629 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 CAP2P40123 477 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 CCT5P48643 541 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 SNX16P57768 344 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 ZBED6P86452 979 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 IFRD2Q12894 506 aaPredicted RBP4.13□□□□□ -1.75
FXN-204ENST00000484259 TBX2Q13207 712 aaPredicted RBP4.13□□□□□ -1.75
FXN-204ENST00000484259 KRT72Q14CN4 511 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 MLC1Q15049 377 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 E2F5Q15329 346 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 TCEA2Q15560 299 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 OCLNQ16625 522 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 DNAJC21Q5F1R6 531 aaKnown RBP4.13□□□□□ -1.75
FXN-204ENST00000484259 ALKBH2Q6NS38 261 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 MAATS1Q7Z4T9 603 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 MORC1Q86VD1 984 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 TTC30AQ86WT1 665 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 DZIP3Q86Y13 1208 aaKnown RBP4.13□□□□□ -1.75
FXN-204ENST00000484259 SAMD14Q8IZD0 417 aaPredicted RBP4.13□□□□□ -1.75
FXN-204ENST00000484259 DEPDC4Q8N2C3 294 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 APPL2Q8NEU8 664 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 PI4K2BQ8TCG2 481 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 PXYLP1Q8TE99 480 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 CHAC2Q8WUX2 184 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 ATXN2LQ8WWM7 1075 aaKnown RBP4.13□□□□□ -1.75
FXN-204ENST00000484259 N4BP2L2Q92802 583 aaPredicted RBP4.13□□□□□ -1.75
FXN-204ENST00000484259 CAMKK2Q96RR4 588 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 KANSL2Q9H9L4 492 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 RNF19AQ9NV58 838 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 COMMD8Q9NX08 183 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.13□□□□□ -1.75
FXN-204ENST00000484259 EPS15L1Q9UBC2 864 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 GGT7Q9UJ14 662 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 PLAAQ9Y263 795 aa4.13□□□□□ -1.75
FXN-204ENST00000484259 EIF4G1Q04637 1599 aaKnown RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 KLRG2A4D1S0 409 aaPredicted RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 TMEM110-MUSTN1A8MSY1 372 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 SMTNL1A8MU46 457 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 C19orf81C9J6K1 198 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 AKAP10O43572 662 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 PTCD1O75127 700 aaKnown RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 COQ9O75208 318 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 TPPPO94811 219 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 ARIH2O95376 493 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 TYRP1P17643 537 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 GNA15P30679 374 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 PRIM1P49642 420 aaKnown RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 ATP1A2P50993 1020 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 NEK2P51955 445 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 NFKB2Q00653 900 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 SLC20A2Q08357 652 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 SLC9A5Q14940 896 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 PTPN14Q15678 1187 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 DDB1Q16531 1140 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 TKFCQ3LXA3 575 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 CT47A1Q5JQC4 288 aaPredicted RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 FAM102BQ5T8I3 360 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 DUSP27Q5VZP5 1158 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 C16orf54Q6UWD8 224 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 RSRC2Q7L4I2 434 aaKnown RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 WAPLQ7Z5K2 1190 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 SNX32Q86XE0 403 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 IQCF2Q8IXL9 164 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 ARL10Q8N8L6 244 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 MNS1Q8NEH6 495 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 SNIP1Q8TAD8 396 aaKnown RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 CABLES1Q8TDN4 633 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 SYAP1Q96A49 352 aaPredicted RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 VMP1Q96GC9 406 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 TBATAQ96M53 351 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 SPAG5Q96R06 1193 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 EYA1Q99502 592 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 DNAJC7Q99615 494 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 ELAC2Q9BQ52 826 aaKnown RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 FAM167BQ9BTA0 163 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 RBSNQ9H1K0 784 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 DHX36Q9H2U1 1008 aaKnown RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 TMEM51Q9NW97 253 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 UTP6Q9NYH9 597 aaKnown RBP4.12□□□□□ -1.75
FXN-204ENST00000484259 IPPQ9Y573 584 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 AK5Q9Y6K8 562 aa4.12□□□□□ -1.75
FXN-204ENST00000484259 HTATSF1O43719 755 aaKnown RBP4.11□□□□□ -1.75
FXN-204ENST00000484259 BAG2O95816 211 aa4.11□□□□□ -1.75
FXN-204ENST00000484259 U2AF1L5P0DN76 240 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms