RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 GPSM2P81274 684 aa8.9□□□□□ -0.98
CHD6-209ENST00000482596 ANKS1AQ92625 1134 aa8.9□□□□□ -0.98
CHD6-209ENST00000482596 FMNL2Q96PY5 1086 aa8.9□□□□□ -0.98
CHD6-209ENST00000482596 UIMC1Q96RL1 719 aa8.9□□□□□ -0.98
CHD6-209ENST00000482596 LBHD1Q9BQE6 289 aaPredicted RBP8.9□□□□□ -0.98
CHD6-209ENST00000482596 MXD3Q9BW11 206 aa8.9□□□□□ -0.98
CHD6-209ENST00000482596 CARD14Q9BXL6 1004 aa8.9□□□□□ -0.98
CHD6-209ENST00000482596 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.9□□□□□ -0.982e-9■■■■□ 26.6
CHD6-209ENST00000482596 EMILIN3Q9NT22 766 aa8.9□□□□□ -0.98
CHD6-209ENST00000482596 MAST2Q6P0Q8 1798 aa8.9□□□□□ -0.98
CHD6-209ENST00000482596 ZNF318Q5VUA4 2279 aa8.89□□□□□ -0.99
CHD6-209ENST00000482596 BTBD19C9JJ37 291 aa8.89□□□□□ -0.99
CHD6-209ENST00000482596 GRAPQ13588 217 aa8.89□□□□□ -0.99
CHD6-209ENST00000482596 AKNAD1Q5T1N1 836 aa8.89□□□□□ -0.99
CHD6-209ENST00000482596 APOBEC3FQ8IUX4 373 aaKnown RBP8.89□□□□□ -0.99
CHD6-209ENST00000482596 GRAPLQ8TC17 118 aaPredicted RBP8.89□□□□□ -0.99
CHD6-209ENST00000482596 LRRC37A2A6NM11 1700 aa8.88□□□□□ -0.99
CHD6-209ENST00000482596 PI4K2BG5E9Z4 385 aa8.88□□□□□ -0.99
CHD6-209ENST00000482596 ADGRE1Q14246 886 aa8.88□□□□□ -0.99
CHD6-209ENST00000482596 NBPF12Q5TAG4 269 aaPredicted RBP8.88□□□□□ -0.99
CHD6-209ENST00000482596 ANKRD13AQ8IZ07 590 aa8.88□□□□□ -0.99
CHD6-209ENST00000482596 DEFB129Q9H1M3 183 aa8.88□□□□□ -0.99
CHD6-209ENST00000482596 WDR70Q9NW82 654 aa8.88□□□□□ -0.99
CHD6-209ENST00000482596 CXXC1Q9P0U4 656 aaPredicted RBP8.88□□□□□ -0.99
CHD6-209ENST00000482596 ANKRD11Q6UB99 2663 aaPredicted RBP8.88□□□□□ -0.99
CHD6-209ENST00000482596 DOCK3Q8IZD9 2030 aa8.88□□□□□ -0.99
CHD6-209ENST00000482596 UNCXA6NJT0 531 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 RGS20O76081 388 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 ITGB8P26012 769 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 FLT3LGP49771 235 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 GTF2A2P52657 109 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 CAMK2BQ13554 666 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 ERICH6Q7L0X2 663 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 NGEFQ8N5V2 710 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 HELBQ8NG08 1087 aaPredicted RBP8.87□□□□□ -0.99
CHD6-209ENST00000482596 TBC1D16Q8TBP0 767 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 TESK2Q96S53 571 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 GAS2L1Q99501 681 aaPredicted RBP8.87□□□□□ -0.99
CHD6-209ENST00000482596 PRDM12Q9H4Q4 367 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 ZNF576Q9H609 170 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 CD320Q9NPF0 282 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 CHD7Q9P2D1 2997 aa8.87□□□□□ -0.99
CHD6-209ENST00000482596 COL1A1P02452 1464 aaPredicted RBP8.86□□□□□ -0.99
CHD6-209ENST00000482596 HCLS1P14317 486 aaPredicted RBP8.86□□□□□ -0.99
CHD6-209ENST00000482596 IREB2P48200 963 aaKnown RBP8.86□□□□□ -0.99
CHD6-209ENST00000482596 MMRN1Q13201 1228 aa8.86□□□□□ -0.99
CHD6-209ENST00000482596 MTHFSDQ2M296 383 aaKnown RBP8.86□□□□□ -0.99
CHD6-209ENST00000482596 TPRNQ4KMQ1 711 aa8.86□□□□□ -0.99
CHD6-209ENST00000482596 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
CHD6-209ENST00000482596 SLC10A5Q5PT55 438 aa8.86□□□□□ -0.99
CHD6-209ENST00000482596 DDX46Q7L014 1031 aaKnown RBP8.86□□□□□ -0.99
CHD6-209ENST00000482596 ERMP1Q7Z2K6 904 aa8.86□□□□□ -0.99
CHD6-209ENST00000482596 ZNF34Q8IZ26 560 aa8.86□□□□□ -0.99
CHD6-209ENST00000482596 EYA3Q99504 573 aa8.86□□□□□ -0.99
CHD6-209ENST00000482596 CARD11Q9BXL7 1154 aa8.86□□□□□ -0.99
CHD6-209ENST00000482596 TSHZ2Q9NRE2 1034 aa8.86□□□□□ -0.99
CHD6-209ENST00000482596 MYO15AQ9UKN7 3530 aa8.85□□□□□ -0.99
CHD6-209ENST00000482596 TPRP12270 2363 aaKnown RBP8.85□□□□□ -0.99
CHD6-209ENST00000482596 WDHD1O75717 1129 aaPredicted RBP8.85□□□□□ -0.99
CHD6-209ENST00000482596 COL6A1P12109 1028 aa8.85□□□□□ -0.99
CHD6-209ENST00000482596 DNAJB2P25686 324 aa8.85□□□□□ -0.99
CHD6-209ENST00000482596 PBX2P40425 430 aa8.85□□□□□ -0.99
CHD6-209ENST00000482596 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.85□□□□□ -0.99
CHD6-209ENST00000482596 TTLL7Q6ZT98 887 aa8.85□□□□□ -0.99
CHD6-209ENST00000482596 PXYLP1Q8TE99 480 aa8.85□□□□□ -0.99
CHD6-209ENST00000482596 ZC3H12CQ9C0D7 883 aaKnown RBP8.85□□□□□ -0.99
CHD6-209ENST00000482596 ECM29Q5VYK3 1845 aa8.84□□□□□ -0.99
CHD6-209ENST00000482596 MAP3K15Q6ZN16 1313 aa8.84□□□□□ -0.99
CHD6-209ENST00000482596 U2AF1L5P0DN76 240 aaPredicted RBP8.84□□□□□ -0.99
CHD6-209ENST00000482596 IGFBP4P22692 258 aa8.84□□□□□ -0.99
CHD6-209ENST00000482596 PTPRZ1P23471 2315 aaPredicted RBP8.84□□□□□ -0.99
CHD6-209ENST00000482596 FCGRTP55899 365 aa8.84□□□□□ -0.99
CHD6-209ENST00000482596 U2AF1Q01081 240 aaKnown RBP eCLIP8.84□□□□□ -0.99
CHD6-209ENST00000482596 TRIM32Q13049 653 aa8.84□□□□□ -0.99
CHD6-209ENST00000482596 IL17REQ8NFR9 667 aa8.84□□□□□ -0.99
CHD6-209ENST00000482596 CELF1Q92879 486 aaKnown RBP8.84□□□□□ -0.99
CHD6-209ENST00000482596 ZBTB3Q9H5J0 574 aa8.84□□□□□ -0.99
CHD6-209ENST00000482596 OGDHLQ9ULD0 1010 aa8.84□□□□□ -0.99
CHD6-209ENST00000482596 PLXNA1Q9UIW2 1896 aa8.83□□□□□ -1
CHD6-209ENST00000482596 USP17L3A6NCW0 530 aa8.83□□□□□ -1
CHD6-209ENST00000482596 USP17L4A6NCW7 530 aa8.83□□□□□ -1
CHD6-209ENST00000482596 ERVV-1B6SEH8 477 aa8.83□□□□□ -1
CHD6-209ENST00000482596 TEFQ10587 303 aa8.83□□□□□ -1
CHD6-209ENST00000482596 USP17L1Q7RTZ2 530 aa8.83□□□□□ -1
CHD6-209ENST00000482596 ZNF454Q8N9F8 522 aa8.83□□□□□ -1
CHD6-209ENST00000482596 ZBED3Q96IU2 234 aaPredicted RBP8.83□□□□□ -1
CHD6-209ENST00000482596 KCNH6Q9H252 994 aa8.83□□□□□ -1
CHD6-209ENST00000482596 ZCCHC17Q9NP64 241 aaKnown RBP8.83□□□□□ -1
CHD6-209ENST00000482596 RALYQ9UKM9 306 aaKnown RBP8.83□□□□□ -1
CHD6-209ENST00000482596 NCOR2Q9Y618 2525 aa8.82□□□□□ -1
CHD6-209ENST00000482596 DPYSL4O14531 572 aa8.82□□□□□ -1
CHD6-209ENST00000482596 ARHGAP33O14559 1287 aa8.82□□□□□ -1
CHD6-209ENST00000482596 TLL1O43897 1013 aa8.82□□□□□ -1
CHD6-209ENST00000482596 GFRA3O60609 400 aa8.82□□□□□ -1
CHD6-209ENST00000482596 VGLL4Q14135 290 aa8.82□□□□□ -1
CHD6-209ENST00000482596 E2F4Q16254 413 aa8.82□□□□□ -1
CHD6-209ENST00000482596 TMC4Q7Z404 712 aa8.82□□□□□ -1
CHD6-209ENST00000482596 PPP1R42Q7Z4L9 355 aa8.82□□□□□ -1
CHD6-209ENST00000482596 OGFOD1Q8N543 542 aa8.82□□□□□ -1
CHD6-209ENST00000482596 CNTNAP3BQ96NU0 1288 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms